Wall clock time and date at job start Mon Mar 30 2020 00:59:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35995 * 116.99899 * 2 1 4 4 C 1.38573 * 120.07588 * 0.02562 * 3 2 1 5 5 C 1.38240 * 119.99798 * 179.97438 * 4 3 2 6 6 C 1.38249 * 120.14940 * 359.97438 * 5 4 3 7 7 C 1.50701 * 119.92478 * 180.27710 * 6 5 4 8 8 C 1.38242 * 120.14748 * 0.02562 * 6 5 4 9 9 C 1.38559 * 119.99715 * 359.97438 * 8 6 5 10 10 O 1.35993 * 120.07178 * 180.02562 * 9 8 6 11 11 C 1.42897 * 116.99956 * 356.72899 * 10 9 8 12 12 H 1.09000 * 109.46985 * 26.85158 * 11 10 9 13 13 C 1.50701 * 109.47277 * 146.85115 * 11 10 9 14 14 H 1.07998 * 120.00109 * 0.02562 * 13 11 10 15 15 C 1.37882 * 120.00345 * 180.02562 * 13 11 10 16 16 N 1.31518 * 119.99401 * 359.97438 * 15 13 11 17 17 Si 1.86790 * 120.00236 * 180.02562 * 15 13 11 18 18 H 1.48505 * 109.47308 * 90.00047 * 17 15 13 19 19 H 1.48494 * 109.47408 * 210.00339 * 17 15 13 20 20 H 1.48506 * 109.47134 * 330.00409 * 17 15 13 21 21 C 1.53000 * 109.47313 * 266.85010 * 11 10 9 22 22 Cl 1.80300 * 109.47135 * 64.99854 * 21 11 10 23 23 H 1.09002 * 109.46813 * 300.00623 * 1 2 3 24 24 H 1.08998 * 109.46779 * 60.00159 * 1 2 3 25 25 H 1.08990 * 109.46968 * 180.02562 * 1 2 3 26 26 H 1.07997 * 119.99762 * 359.96061 * 4 3 2 27 27 H 1.07999 * 119.92223 * 180.02562 * 5 4 3 28 28 H 1.08997 * 109.47538 * 269.72904 * 7 6 5 29 29 H 1.08996 * 109.47258 * 29.73083 * 7 6 5 30 30 H 1.08996 * 109.46781 * 149.72963 * 7 6 5 31 31 H 1.07998 * 119.99778 * 180.02562 * 8 6 5 32 32 H 0.96995 * 119.99205 * 179.97438 * 16 15 13 33 33 H 1.08998 * 109.47522 * 185.00237 * 21 11 10 34 34 H 1.09003 * 109.47532 * 305.00039 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2932 2.3749 0.0005 5 6 1.9225 3.6058 0.0011 6 6 3.3030 3.6799 0.0016 7 6 3.9837 5.0244 0.0085 8 6 4.0603 2.5234 0.0011 9 6 3.4360 1.2864 0.0005 10 8 4.1795 0.1478 0.0005 11 6 5.5986 0.2996 -0.0715 12 1 5.8827 1.2639 0.3500 13 6 6.2624 -0.8052 0.7094 14 1 5.6608 -1.5492 1.2103 15 6 7.6378 -0.8662 0.7844 16 7 8.3704 0.0395 0.1740 17 14 8.4605 -2.2360 1.7518 18 1 8.7061 -3.3955 0.8570 19 1 9.7530 -1.7495 2.2974 20 1 7.5765 -2.6524 2.8700 21 6 6.0454 0.2305 -1.5332 22 17 5.3687 1.6371 -2.4357 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 0.2147 2.3197 0.0003 27 1 1.3342 4.5115 0.0019 28 1 4.1523 5.3516 -1.0174 29 1 3.3516 5.7490 0.5217 30 1 4.9395 4.9449 0.5262 31 1 5.1386 2.5841 0.0019 32 1 9.3380 -0.0032 0.2272 33 1 7.1339 0.2571 -1.5821 34 1 5.6842 -0.6957 -1.9802 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001225323635.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:53 Heat of formation + Delta-G solvation = -66.481072 kcal Electronic energy + Delta-G solvation = -18893.860983 eV Core-core repulsion = 15818.287303 eV Total energy + Delta-G solvation = -3075.573680 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -39.93874 -37.90091 -36.65917 -34.78411 -33.43044 -31.45463 -29.99193 -28.88187 -27.51461 -25.50571 -25.29042 -22.77623 -20.85139 -20.38197 -17.99331 -16.80801 -16.33638 -15.83086 -15.42285 -14.74486 -14.32422 -14.10113 -13.88624 -13.69316 -13.19139 -13.07094 -12.78180 -12.13735 -12.05339 -11.81149 -11.62128 -11.41242 -11.14878 -11.04405 -10.82236 -10.69313 -10.60205 -10.41556 -10.17930 -9.62130 -9.38027 -9.12207 -8.64118 -7.92644 -7.02404 -6.40262 -4.46901 1.85155 2.01801 3.15223 3.22869 3.27342 3.44995 3.72990 4.07075 4.26386 4.44822 4.96063 5.15002 5.30775 5.34781 5.36067 5.54824 5.63361 5.68333 5.90331 5.93747 6.01764 6.20167 6.24259 6.33635 6.35116 6.68072 6.73206 6.87176 7.10884 7.15841 7.31980 7.56961 7.76458 7.82199 8.43071 8.74997 9.20681 10.67027 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.018573 B = 0.006815 C = 0.005902 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1507.235880 B = 4107.518335 C = 4743.078617 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.305 6.305 3 C 0.073 3.927 4 C -0.176 4.176 5 C -0.140 4.140 6 C -0.086 4.086 7 C -0.106 4.106 8 C -0.160 4.160 9 C 0.137 3.863 10 O -0.300 6.300 11 C 0.204 3.796 12 H 0.050 0.950 13 C -0.518 4.518 14 H 0.076 0.924 15 C 0.063 3.937 16 N -0.890 5.890 17 Si 0.916 3.084 18 H -0.276 1.276 19 H -0.282 1.282 20 H -0.269 1.269 21 C -0.035 4.035 22 Cl -0.241 7.241 23 H 0.048 0.952 24 H 0.048 0.952 25 H 0.093 0.907 26 H 0.124 0.876 27 H 0.115 0.885 28 H 0.064 0.936 29 H 0.059 0.941 30 H 0.064 0.936 31 H 0.144 0.856 32 H 0.271 0.729 33 H 0.133 0.867 34 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.807 5.118 -0.961 11.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.219 6.219 3 C 0.028 3.972 4 C -0.195 4.195 5 C -0.158 4.158 6 C -0.087 4.087 7 C -0.163 4.163 8 C -0.179 4.179 9 C 0.089 3.911 10 O -0.214 6.214 11 C 0.149 3.851 12 H 0.068 0.932 13 C -0.556 4.556 14 H 0.095 0.905 15 C -0.140 4.140 16 N -0.528 5.528 17 Si 0.742 3.258 18 H -0.202 1.202 19 H -0.208 1.208 20 H -0.194 1.194 21 C -0.097 4.097 22 Cl -0.216 7.216 23 H 0.067 0.933 24 H 0.067 0.933 25 H 0.111 0.889 26 H 0.142 0.858 27 H 0.133 0.867 28 H 0.083 0.917 29 H 0.078 0.922 30 H 0.083 0.917 31 H 0.161 0.839 32 H 0.081 0.919 33 H 0.151 0.849 34 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -9.613 4.863 -1.047 10.824 hybrid contribution 0.365 -0.331 0.254 0.554 sum -9.249 4.533 -0.793 10.330 Atomic orbital electron populations 1.22935 0.79902 1.03187 1.00538 1.86206 1.19845 1.26357 1.89515 1.18271 0.89504 0.84719 1.04678 1.20825 0.99000 0.91757 1.07909 1.20479 0.93746 0.96416 1.05192 1.19532 0.93246 0.94873 1.01036 1.20685 1.00254 0.93504 1.01849 1.21203 1.01242 0.90518 1.04907 1.18351 0.88229 0.87326 0.97175 1.86232 1.21478 1.27144 1.86510 1.20519 0.73582 0.99952 0.91025 0.93232 1.21046 0.91204 1.11925 1.31453 0.90537 1.24978 0.96780 0.96705 0.95529 1.69802 1.06461 1.34035 1.42487 0.86182 0.78568 0.80979 0.80035 1.20165 1.20789 1.19391 1.25764 1.04052 0.86265 0.93660 1.98640 1.88894 1.53605 1.80414 0.93330 0.93341 0.88850 0.85841 0.86702 0.91680 0.92181 0.91672 0.83894 0.91872 0.84926 0.90781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.38 9.81 101.05 0.99 1.37 16 2 O -0.31 -5.77 10.28 -34.23 -0.35 -6.12 16 3 C 0.07 1.43 6.70 -39.12 -0.26 1.17 16 4 C -0.18 -2.85 9.04 -39.46 -0.36 -3.21 16 5 C -0.14 -2.19 9.69 -39.58 -0.38 -2.57 16 6 C -0.09 -1.48 5.88 -104.62 -0.62 -2.10 16 7 C -0.11 -1.47 10.01 36.01 0.36 -1.11 16 8 C -0.16 -3.24 6.70 -39.46 -0.26 -3.50 16 9 C 0.14 3.00 5.98 -39.12 -0.23 2.76 16 10 O -0.30 -7.43 9.51 -34.22 -0.33 -7.76 16 11 C 0.20 5.12 2.19 -27.88 -0.06 5.05 16 12 H 0.05 1.30 5.40 -51.93 -0.28 1.02 16 13 C -0.52 -13.85 8.89 -34.44 -0.31 -14.15 16 14 H 0.08 2.08 7.81 -52.49 -0.41 1.67 16 15 C 0.06 1.62 5.29 -17.82 -0.09 1.53 16 16 N -0.89 -23.34 11.29 55.43 0.63 -22.71 16 17 Si 0.92 20.19 29.54 -169.99 -5.02 15.17 16 18 H -0.28 -6.00 7.11 56.52 0.40 -5.60 16 19 H -0.28 -6.14 7.11 56.52 0.40 -5.73 16 20 H -0.27 -5.94 7.11 56.52 0.40 -5.54 16 21 C -0.03 -0.82 6.17 37.16 0.23 -0.59 16 22 Cl -0.24 -5.12 25.62 -51.86 -1.33 -6.45 16 23 H 0.05 0.54 7.66 -51.93 -0.40 0.14 16 24 H 0.05 0.54 7.66 -51.93 -0.40 0.14 16 25 H 0.09 0.97 8.14 -51.93 -0.42 0.55 16 26 H 0.12 1.60 6.30 -52.49 -0.33 1.27 16 27 H 0.11 1.45 8.06 -52.49 -0.42 1.03 16 28 H 0.06 0.86 8.14 -51.93 -0.42 0.43 16 29 H 0.06 0.69 8.08 -51.93 -0.42 0.27 16 30 H 0.06 0.90 8.08 -51.93 -0.42 0.48 16 31 H 0.14 3.07 5.10 -52.49 -0.27 2.80 16 32 H 0.27 6.73 8.31 -40.82 -0.34 6.39 16 33 H 0.13 3.29 5.95 -51.93 -0.31 2.98 16 34 H 0.07 1.72 8.14 -51.93 -0.42 1.29 16 LS Contribution 296.77 15.07 4.47 4.47 Total: -1.00 -28.17 296.77 -6.98 -35.15 By element: Atomic # 1 Polarization: 7.66 SS G_CDS: -4.06 Total: 3.60 kcal Atomic # 6 Polarization: -14.35 SS G_CDS: -1.00 Total: -15.34 kcal Atomic # 7 Polarization: -23.34 SS G_CDS: 0.63 Total: -22.71 kcal Atomic # 8 Polarization: -13.20 SS G_CDS: -0.68 Total: -13.88 kcal Atomic # 14 Polarization: 20.19 SS G_CDS: -5.02 Total: 15.17 kcal Atomic # 17 Polarization: -5.12 SS G_CDS: -1.33 Total: -6.45 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.17 -6.98 -35.15 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001225323635.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.331 kcal (2) G-P(sol) polarization free energy of solvation -28.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.498 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.150 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds