Wall clock time and date at job start Mon Mar 30 2020 00:59:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35892 * 117.00725 * 2 1 4 4 C 1.38790 * 120.03344 * 180.02562 * 3 2 1 5 5 C 1.38149 * 120.05799 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.94866 * 179.97438 * 5 4 3 7 7 C 1.38202 * 120.10972 * 359.74335 * 5 4 3 8 8 C 1.38752 * 120.05274 * 0.51103 * 7 5 4 9 9 O 1.35902 * 120.03080 * 179.76732 * 8 7 5 10 10 C 1.42903 * 116.99482 * 355.70523 * 9 8 7 11 11 H 1.08997 * 109.47066 * 27.29910 * 10 9 8 12 12 C 1.50698 * 109.46564 * 147.29585 * 10 9 8 13 13 H 1.08000 * 120.00339 * 34.55379 * 12 10 9 14 14 C 1.37875 * 120.00119 * 214.54807 * 12 10 9 15 15 N 1.31513 * 120.00186 * 184.21657 * 14 12 10 16 16 Si 1.86802 * 120.00069 * 4.21630 * 14 12 10 17 17 H 1.48500 * 109.47065 * 94.07769 * 16 14 12 18 18 H 1.48495 * 109.47329 * 214.08424 * 16 14 12 19 19 H 1.48505 * 109.46981 * 334.08479 * 16 14 12 20 20 C 1.52992 * 109.47286 * 267.29750 * 10 9 8 21 21 Cl 1.80298 * 109.47397 * 64.87324 * 20 10 9 22 22 C 1.38624 * 120.02222 * 359.97438 * 3 2 1 23 23 H 1.08999 * 109.46701 * 300.00649 * 1 2 3 24 24 H 1.09000 * 109.47022 * 59.99887 * 1 2 3 25 25 H 1.08992 * 109.47610 * 180.02562 * 1 2 3 26 26 H 1.08003 * 119.97045 * 359.95471 * 4 3 2 27 27 H 1.09000 * 109.46889 * 89.99588 * 6 5 4 28 28 H 1.09002 * 109.47191 * 209.99894 * 6 5 4 29 29 H 1.09000 * 109.46935 * 330.00217 * 6 5 4 30 30 H 1.07991 * 119.97650 * 180.25316 * 7 5 4 31 31 H 0.96999 * 119.99932 * 179.97438 * 15 14 12 32 32 H 1.09004 * 109.47534 * 304.87313 * 20 10 9 33 33 H 1.09004 * 109.47087 * 184.87524 * 20 10 9 34 34 H 1.07995 * 120.05222 * 0.02562 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2107 0.0000 4 6 3.4321 1.2840 -0.0005 5 6 4.0599 2.5146 -0.0011 6 6 5.5650 2.5913 -0.0011 7 6 3.3101 3.6755 -0.0064 8 6 1.9243 3.6076 -0.0006 9 8 1.1874 4.7495 -0.0011 10 6 1.9029 5.9833 0.0876 11 1 2.9012 5.8552 -0.3308 12 6 1.1671 7.0473 -0.6853 13 1 0.0875 7.0429 -0.7165 14 6 1.8719 8.0265 -1.3526 15 7 1.2302 9.0020 -1.9577 16 14 3.7385 7.9676 -1.3972 17 1 4.1825 7.2753 -2.6336 18 1 4.2779 9.3511 -1.3835 19 1 4.2389 7.2294 -0.2097 20 6 2.0148 6.4037 1.5544 21 17 3.0173 5.2019 2.4494 22 6 1.2917 2.3737 -0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 4.0203 0.3782 -0.0002 27 1 5.9279 2.6092 -1.0287 28 1 5.8826 3.4988 0.5124 29 1 5.9731 1.7211 0.5131 30 1 3.8032 4.6363 -0.0110 31 1 1.7262 9.6911 -2.4269 32 1 1.0195 6.4479 1.9967 33 1 2.4836 7.3859 1.6161 34 1 0.2132 2.3187 -0.0005 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001225338097.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:59:56 Heat of formation + Delta-G solvation = -66.932425 kcal Electronic energy + Delta-G solvation = -18812.982402 eV Core-core repulsion = 15737.389150 eV Total energy + Delta-G solvation = -3075.593252 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.05052 -38.54653 -36.53358 -35.15806 -33.36043 -31.82537 -30.38093 -29.34729 -27.27247 -26.28941 -25.39601 -22.71932 -21.00607 -20.36531 -17.92607 -17.34414 -16.17287 -15.95908 -15.59036 -15.54978 -14.88988 -14.41645 -13.72193 -13.42764 -13.22873 -13.15767 -13.05450 -12.83995 -12.40833 -12.02064 -11.84066 -11.65407 -11.56044 -11.18194 -11.09732 -10.82754 -10.67364 -10.42298 -10.08756 -9.77040 -9.44617 -9.31558 -8.92199 -8.02626 -7.38152 -6.49689 -4.57335 1.76310 1.97870 2.93882 3.06955 3.10487 3.14441 3.44049 4.04007 4.05354 4.18944 4.86657 5.10255 5.19490 5.27138 5.41173 5.46198 5.56290 5.58323 5.75465 5.78073 5.80050 5.85332 5.95178 6.02978 6.08998 6.23056 6.50647 6.63571 6.84838 6.95613 7.04008 7.16633 7.63109 7.90242 8.36151 8.63867 9.06976 10.60837 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.019714 B = 0.006766 C = 0.006341 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1419.992394 B = 4137.111094 C = 4414.503828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.320 6.320 3 C 0.158 3.842 4 C -0.205 4.205 5 C -0.016 4.016 6 C -0.112 4.112 7 C -0.232 4.232 8 C 0.195 3.805 9 O -0.301 6.301 10 C 0.173 3.827 11 H 0.056 0.944 12 C -0.524 4.524 13 H 0.090 0.910 14 C 0.087 3.913 15 N -0.869 5.869 16 Si 0.861 3.139 17 H -0.266 1.266 18 H -0.276 1.276 19 H -0.256 1.256 20 C -0.039 4.039 21 Cl -0.226 7.226 22 C -0.259 4.259 23 H 0.055 0.945 24 H 0.056 0.944 25 H 0.095 0.905 26 H 0.122 0.878 27 H 0.070 0.930 28 H 0.067 0.933 29 H 0.065 0.935 30 H 0.131 0.869 31 H 0.274 0.726 32 H 0.093 0.907 33 H 0.097 0.903 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.990 -11.657 4.354 13.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.234 6.234 3 C 0.113 3.887 4 C -0.224 4.224 5 C -0.017 4.017 6 C -0.169 4.169 7 C -0.251 4.251 8 C 0.147 3.853 9 O -0.213 6.213 10 C 0.117 3.883 11 H 0.073 0.927 12 C -0.561 4.561 13 H 0.108 0.892 14 C -0.120 4.120 15 N -0.504 5.504 16 Si 0.685 3.315 17 H -0.191 1.191 18 H -0.201 1.201 19 H -0.180 1.180 20 C -0.102 4.102 21 Cl -0.200 7.200 22 C -0.278 4.278 23 H 0.074 0.926 24 H 0.075 0.925 25 H 0.113 0.887 26 H 0.140 0.860 27 H 0.089 0.911 28 H 0.086 0.914 29 H 0.084 0.916 30 H 0.148 0.852 31 H 0.084 0.916 32 H 0.111 0.889 33 H 0.115 0.885 34 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.932 -11.693 4.293 13.062 hybrid contribution 0.796 0.411 -0.008 0.896 sum 4.728 -11.281 4.285 12.961 Atomic orbital electron populations 1.23011 0.78707 1.03269 1.01762 1.86016 1.21224 1.27147 1.88977 1.18549 0.91801 0.83233 0.95073 1.19917 0.90960 0.97562 1.13965 1.19326 0.95470 0.91696 0.95166 1.20780 0.91276 1.02608 1.02241 1.21171 0.93170 0.99122 1.11588 1.18786 0.89896 0.87122 0.89474 1.86284 1.36710 1.12759 1.85554 1.20938 0.95071 0.81176 0.91088 0.92694 1.20685 0.96189 1.07790 1.31395 0.89204 1.24955 0.98729 0.94680 0.93617 1.69837 1.36513 1.11923 1.32161 0.87063 0.85561 0.78681 0.80150 1.19097 1.20100 1.18019 1.25938 0.96543 0.92898 0.94790 1.98677 1.75552 1.65272 1.80457 1.20307 1.00119 0.89940 1.17448 0.92613 0.92528 0.88710 0.86039 0.91100 0.91428 0.91613 0.85165 0.91588 0.88856 0.88473 0.85257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.31 9.81 101.05 0.99 1.30 16 2 O -0.32 -4.80 10.50 -19.40 -0.20 -5.01 16 3 C 0.16 2.68 6.68 -39.23 -0.26 2.42 16 4 C -0.21 -3.34 9.63 -39.41 -0.38 -3.72 16 5 C -0.02 -0.27 5.88 -104.67 -0.61 -0.89 16 6 C -0.11 -1.48 10.01 36.01 0.36 -1.12 16 7 C -0.23 -4.46 6.70 -39.40 -0.26 -4.73 16 8 C 0.20 3.99 5.93 -39.24 -0.23 3.76 16 9 O -0.30 -6.85 9.73 -19.43 -0.19 -7.04 16 10 C 0.17 3.94 1.80 -27.89 -0.05 3.89 16 11 H 0.06 1.26 2.38 -51.93 -0.12 1.14 16 12 C -0.52 -13.82 9.24 -34.44 -0.32 -14.13 16 13 H 0.09 2.60 8.06 -52.49 -0.42 2.18 16 14 C 0.09 2.30 5.47 -17.82 -0.10 2.20 16 15 N -0.87 -24.35 13.96 55.43 0.77 -23.58 16 16 Si 0.86 19.31 27.26 -169.99 -4.63 14.68 16 17 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 18 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 19 H -0.26 -5.40 6.44 56.52 0.36 -5.04 16 20 C -0.04 -0.78 6.32 37.15 0.23 -0.55 16 21 Cl -0.23 -4.24 25.63 -51.86 -1.33 -5.57 16 22 C -0.26 -4.72 8.98 -39.28 -0.35 -5.08 16 23 H 0.06 0.60 7.66 -51.93 -0.40 0.20 16 24 H 0.06 0.62 7.66 -51.93 -0.40 0.22 16 25 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 26 H 0.12 1.72 8.06 -52.48 -0.42 1.29 16 27 H 0.07 0.85 8.14 -51.93 -0.42 0.43 16 28 H 0.07 0.89 8.09 -51.93 -0.42 0.47 16 29 H 0.06 0.74 8.08 -51.93 -0.42 0.32 16 30 H 0.13 2.61 5.14 -52.49 -0.27 2.34 16 31 H 0.27 7.10 8.31 -40.82 -0.34 6.77 16 32 H 0.09 1.82 8.14 -51.93 -0.42 1.39 16 33 H 0.10 1.89 8.14 -51.93 -0.42 1.47 16 34 H 0.13 2.17 6.30 -52.49 -0.33 1.84 16 LS Contribution 296.47 15.07 4.47 4.47 Total: -1.00 -28.38 296.47 -6.17 -34.55 By element: Atomic # 1 Polarization: 8.21 SS G_CDS: -4.07 Total: 4.14 kcal Atomic # 6 Polarization: -15.66 SS G_CDS: -0.99 Total: -16.65 kcal Atomic # 7 Polarization: -24.35 SS G_CDS: 0.77 Total: -23.58 kcal Atomic # 8 Polarization: -11.65 SS G_CDS: -0.39 Total: -12.04 kcal Atomic # 14 Polarization: 19.31 SS G_CDS: -4.63 Total: 14.68 kcal Atomic # 17 Polarization: -4.24 SS G_CDS: -1.33 Total: -5.57 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.38 -6.17 -34.55 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001225338097.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.384 kcal (2) G-P(sol) polarization free energy of solvation -28.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.764 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.169 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.548 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.932 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds