Wall clock time and date at job start Mon Mar 30 2020 02:07:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42891 * 114.00229 * 2 1 4 4 C 1.50703 * 109.47181 * 180.02562 * 3 2 1 5 5 C 1.38266 * 119.94278 * 269.72732 * 4 3 2 6 6 C 1.38144 * 120.05822 * 179.72503 * 5 4 3 7 7 C 1.38736 * 119.93945 * 0.54597 * 6 5 4 8 8 O 1.35904 * 120.05398 * 179.74805 * 7 6 5 9 9 C 1.42895 * 116.99995 * 176.48007 * 8 7 6 10 10 H 1.09003 * 109.47045 * 26.94852 * 9 8 7 11 11 C 1.50695 * 109.47472 * 146.95371 * 9 8 7 12 12 H 1.08007 * 119.99896 * 359.97438 * 11 9 8 13 13 C 1.37876 * 120.00078 * 180.02562 * 11 9 8 14 14 N 1.31511 * 120.00404 * 359.97438 * 13 11 9 15 15 Si 1.86804 * 119.99716 * 180.02562 * 13 11 9 16 16 H 1.48498 * 109.47331 * 359.97438 * 15 13 11 17 17 H 1.48496 * 109.47194 * 119.99738 * 15 13 11 18 18 H 1.48503 * 109.47025 * 240.00013 * 15 13 11 19 19 C 1.53004 * 109.47111 * 266.95706 * 9 8 7 20 20 Cl 1.80296 * 109.47166 * 64.99630 * 19 9 8 21 21 C 1.38729 * 119.88832 * 359.72769 * 7 6 5 22 22 C 1.38145 * 119.94510 * 359.97438 * 21 7 6 23 23 H 1.08995 * 109.47251 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.47228 * 300.00424 * 1 2 3 25 25 H 1.09009 * 109.46716 * 59.99716 * 1 2 3 26 26 H 1.09007 * 109.47196 * 299.99998 * 3 2 1 27 27 H 1.09000 * 109.47327 * 59.99977 * 3 2 1 28 28 H 1.08003 * 119.96783 * 359.97438 * 5 4 3 29 29 H 1.07997 * 120.02885 * 180.26734 * 6 5 4 30 30 H 0.96994 * 120.00044 * 179.97438 * 14 13 11 31 31 H 1.08998 * 109.47097 * 185.00168 * 19 9 8 32 32 H 1.09000 * 109.46858 * 304.99828 * 19 9 8 33 33 H 1.08001 * 120.02817 * 179.97438 * 21 7 6 34 34 H 1.08007 * 119.97102 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5126 1.1863 -0.0006 5 6 4.2015 1.1373 1.1972 6 6 5.5781 1.0224 1.1994 7 6 6.2704 0.9677 -0.0017 8 8 7.6251 0.8599 -0.0022 9 6 8.2651 0.7310 -1.2733 10 1 7.6489 1.2011 -2.0397 11 6 9.6121 1.4053 -1.2282 12 1 9.9458 1.8848 -0.3198 13 6 10.4179 1.4110 -2.3470 14 7 10.0114 0.8276 -3.4533 15 14 12.0879 2.2462 -2.2908 16 1 12.3079 2.8228 -0.9401 17 1 13.1496 1.2501 -2.5832 18 1 12.1334 3.3304 -3.3047 19 6 8.4478 -0.7516 -1.6043 20 17 6.8320 -1.5265 -1.8030 21 6 5.5772 1.0229 -1.2022 22 6 4.2001 1.1315 -1.1989 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3634 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8901 26 1 1.6886 1.8463 -0.8900 27 1 1.6887 1.8463 0.8900 28 1 3.6625 1.1847 2.1319 29 1 6.1154 0.9798 2.1353 30 1 10.5782 0.8320 -4.2404 31 1 9.0143 -0.8500 -2.5302 32 1 8.9882 -1.2409 -0.7939 33 1 6.1138 0.9809 -2.1385 34 1 3.6600 1.1740 -2.1333 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001227675204.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:07:50 Heat of formation + Delta-G solvation = -73.385225 kcal Electronic energy + Delta-G solvation = -18275.165217 eV Core-core repulsion = 15199.292150 eV Total energy + Delta-G solvation = -3075.873067 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.52729 -37.99291 -36.60450 -34.80743 -33.47426 -30.97799 -30.47269 -29.24363 -26.83112 -25.36143 -24.80653 -22.85579 -21.42726 -20.11359 -17.54474 -16.85364 -16.33373 -15.82587 -15.73573 -15.07451 -14.53633 -14.45930 -14.07888 -13.51586 -13.33830 -12.90100 -12.64970 -12.31471 -12.15790 -11.89783 -11.64169 -11.43524 -11.15385 -11.03900 -10.90379 -10.66987 -10.53789 -10.16284 -9.69483 -9.60787 -9.39116 -9.13870 -8.67915 -8.38915 -7.33211 -6.44721 -4.52209 1.89539 1.92123 3.10860 3.20248 3.25613 3.42158 3.86702 4.04113 4.43194 4.50689 4.91931 5.06481 5.10598 5.27189 5.31634 5.41301 5.48739 5.56134 5.58568 5.88319 6.03563 6.12898 6.28416 6.32851 6.53691 6.65756 6.86942 7.01059 7.04515 7.16029 7.19228 7.37677 7.54845 7.75816 8.33910 8.67594 9.15786 10.62510 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.032554 B = 0.004650 C = 0.004398 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 859.892386 B = 6020.072234 C = 6365.089343 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.385 6.385 3 C 0.114 3.886 4 C -0.156 4.156 5 C -0.066 4.066 6 C -0.173 4.173 7 C 0.166 3.834 8 O -0.311 6.311 9 C 0.204 3.796 10 H 0.052 0.948 11 C -0.521 4.521 12 H 0.077 0.923 13 C 0.063 3.937 14 N -0.889 5.889 15 Si 0.916 3.084 16 H -0.268 1.268 17 H -0.279 1.279 18 H -0.279 1.279 19 C -0.037 4.037 20 Cl -0.238 7.238 21 C -0.195 4.195 22 C -0.061 4.061 23 H 0.083 0.917 24 H 0.038 0.962 25 H 0.038 0.962 26 H 0.051 0.949 27 H 0.051 0.949 28 H 0.118 0.882 29 H 0.124 0.876 30 H 0.271 0.729 31 H 0.133 0.867 32 H 0.074 0.926 33 H 0.139 0.861 34 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.936 0.415 4.346 12.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.304 6.304 3 C 0.038 3.962 4 C -0.156 4.156 5 C -0.084 4.084 6 C -0.192 4.192 7 C 0.119 3.881 8 O -0.224 6.224 9 C 0.149 3.851 10 H 0.070 0.930 11 C -0.559 4.559 12 H 0.095 0.905 13 C -0.140 4.140 14 N -0.526 5.526 15 Si 0.743 3.257 16 H -0.193 1.193 17 H -0.205 1.205 18 H -0.205 1.205 19 C -0.100 4.100 20 Cl -0.212 7.212 21 C -0.213 4.213 22 C -0.080 4.080 23 H 0.101 0.899 24 H 0.057 0.943 25 H 0.057 0.943 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.136 0.864 29 H 0.142 0.858 30 H 0.081 0.919 31 H 0.151 0.849 32 H 0.092 0.908 33 H 0.156 0.844 34 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -11.717 0.153 4.292 12.479 hybrid contribution 0.557 0.427 -0.377 0.797 sum -11.160 0.580 3.914 11.840 Atomic orbital electron populations 1.22716 0.81804 1.02486 0.99638 1.88035 1.18888 1.28233 1.95289 1.21231 0.90549 0.84428 0.99995 1.19216 0.93154 1.09537 0.93698 1.20607 0.93095 0.97748 0.96929 1.20326 0.93556 1.08909 0.96420 1.19184 0.84299 0.91145 0.93495 1.86135 1.14936 1.85401 1.35880 1.20551 0.93596 0.90963 0.79984 0.93025 1.21069 1.00008 1.35545 0.99289 0.90501 1.24983 0.99280 0.95081 0.94628 1.69804 1.37896 1.42754 1.02150 0.86126 0.81893 0.79110 0.78608 1.19265 1.20514 1.20503 1.25743 0.82346 0.95611 1.06268 1.98652 1.38750 1.85263 1.98520 1.21480 0.94779 1.06385 0.98655 1.20692 0.93550 0.96844 0.96879 0.89889 0.94349 0.94314 0.93045 0.93075 0.86399 0.85817 0.91852 0.84902 0.90759 0.84395 0.86699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 11.01 101.05 1.11 1.41 16 2 O -0.39 -5.48 10.69 -35.23 -0.38 -5.86 16 3 C 0.11 1.49 6.06 36.01 0.22 1.71 16 4 C -0.16 -2.50 5.51 -104.60 -0.58 -3.08 16 5 C -0.07 -1.05 9.69 -39.61 -0.38 -1.43 16 6 C -0.17 -3.14 9.99 -39.43 -0.39 -3.54 16 7 C 0.17 3.47 5.96 -39.22 -0.23 3.23 16 8 O -0.31 -7.28 9.73 -19.44 -0.19 -7.46 16 9 C 0.20 4.97 2.19 -27.88 -0.06 4.91 16 10 H 0.05 1.33 5.39 -51.93 -0.28 1.05 16 11 C -0.52 -13.57 8.88 -34.44 -0.31 -13.88 16 12 H 0.08 2.02 7.81 -52.48 -0.41 1.61 16 13 C 0.06 1.61 5.29 -17.82 -0.09 1.51 16 14 N -0.89 -23.03 11.29 55.43 0.63 -22.41 16 15 Si 0.92 19.81 29.54 -169.99 -5.02 14.78 16 16 H -0.27 -5.78 7.11 56.52 0.40 -5.38 16 17 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 18 H -0.28 -6.01 7.11 56.52 0.40 -5.60 16 19 C -0.04 -0.85 6.17 37.16 0.23 -0.62 16 20 Cl -0.24 -5.05 25.62 -51.86 -1.33 -6.38 16 21 C -0.19 -3.88 7.05 -39.43 -0.28 -4.16 16 22 C -0.06 -1.07 9.69 -39.61 -0.38 -1.45 16 23 H 0.08 0.71 8.14 -51.93 -0.42 0.28 16 24 H 0.04 0.31 8.14 -51.93 -0.42 -0.11 16 25 H 0.04 0.33 8.14 -51.92 -0.42 -0.09 16 26 H 0.05 0.60 8.08 -51.92 -0.42 0.18 16 27 H 0.05 0.57 8.08 -51.93 -0.42 0.15 16 28 H 0.12 1.55 8.06 -52.48 -0.42 1.12 16 29 H 0.12 2.05 8.06 -52.49 -0.42 1.63 16 30 H 0.27 6.65 8.31 -40.82 -0.34 6.31 16 31 H 0.13 3.26 5.95 -51.93 -0.31 2.95 16 32 H 0.07 1.67 8.14 -51.93 -0.42 1.25 16 33 H 0.14 2.94 5.12 -52.49 -0.27 2.67 16 34 H 0.11 1.77 8.06 -52.48 -0.42 1.35 16 LS Contribution 301.19 15.07 4.54 4.54 Total: -1.00 -27.26 301.19 -7.10 -34.37 By element: Atomic # 1 Polarization: 8.01 SS G_CDS: -4.20 Total: 3.80 kcal Atomic # 6 Polarization: -14.23 SS G_CDS: -1.15 Total: -15.38 kcal Atomic # 7 Polarization: -23.03 SS G_CDS: 0.63 Total: -22.41 kcal Atomic # 8 Polarization: -12.76 SS G_CDS: -0.57 Total: -13.32 kcal Atomic # 14 Polarization: 19.81 SS G_CDS: -5.02 Total: 14.78 kcal Atomic # 17 Polarization: -5.05 SS G_CDS: -1.33 Total: -6.38 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -27.26 -7.10 -34.37 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001227675204.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.019 kcal (2) G-P(sol) polarization free energy of solvation -27.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds