Wall clock time and date at job start Mon Mar 30 2020 02:08:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42897 * 114.00414 * 2 1 4 4 C 1.52998 * 109.47510 * 179.97438 * 3 2 1 5 5 H 1.08997 * 109.47553 * 175.00134 * 4 3 2 6 6 C 1.53000 * 109.46824 * 54.99950 * 4 3 2 7 7 Cl 1.80301 * 109.46945 * 175.00047 * 6 4 3 8 8 O 1.42904 * 109.47142 * 295.00020 * 4 3 2 9 9 C 1.35632 * 117.00023 * 217.63120 * 8 4 3 10 10 C 1.38448 * 120.26899 * 354.12229 * 9 8 4 11 11 C 1.38305 * 120.05187 * 179.97438 * 10 9 8 12 12 C 1.38815 * 120.59493 * 359.73000 * 11 10 9 13 13 C 1.36494 * 120.53351 * 0.55418 * 12 11 10 14 14 C 1.40724 * 119.92988 * 359.44356 * 13 12 11 15 15 C 1.41152 * 120.28973 * 180.25308 * 14 13 12 16 16 H 1.07998 * 120.00325 * 208.71267 * 15 14 13 17 17 C 1.39941 * 119.99633 * 28.71707 * 15 14 13 18 18 N 1.30857 * 120.00090 * 18.99191 * 17 15 14 19 19 Si 1.86800 * 119.99663 * 198.98756 * 17 15 14 20 20 H 1.48500 * 109.47125 * 90.00600 * 19 17 15 21 21 H 1.48508 * 109.47100 * 209.99975 * 19 17 15 22 22 H 1.48501 * 109.47415 * 329.99946 * 19 17 15 23 23 H 1.08998 * 109.46715 * 59.99642 * 1 2 3 24 24 H 1.08997 * 109.47311 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47083 * 299.99976 * 1 2 3 26 26 H 1.09007 * 109.46885 * 59.99806 * 3 2 1 27 27 H 1.08995 * 109.47016 * 300.00309 * 3 2 1 28 28 H 1.08999 * 109.47025 * 294.99972 * 6 4 3 29 29 H 1.08998 * 109.46934 * 55.00356 * 6 4 3 30 30 H 1.08002 * 119.97275 * 359.95777 * 10 9 8 31 31 H 1.08006 * 119.69853 * 179.97438 * 11 10 9 32 32 H 1.07999 * 119.73723 * 180.29719 * 12 11 10 33 33 H 1.08004 * 120.03192 * 179.72508 * 13 12 11 34 34 H 0.97002 * 119.99862 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 0.0006 5 1 3.9786 2.1764 -0.0889 6 6 3.9790 0.3193 -1.1807 7 17 5.7798 0.2971 -1.2667 8 8 3.9649 0.5796 1.2220 9 6 5.1129 1.0487 1.7712 10 6 5.8796 1.9821 1.0948 11 6 7.0491 2.4579 1.6593 12 6 7.4638 2.0121 2.9068 13 6 6.7296 1.0879 3.5923 14 6 5.5358 0.5890 3.0389 15 6 4.7678 -0.3629 3.7435 16 1 4.1589 -1.0725 3.2031 17 6 4.7953 -0.3870 5.1425 18 7 5.2102 0.6612 5.8069 19 14 4.2397 -1.9156 6.0613 20 1 5.4013 -2.8169 6.2706 21 1 3.6739 -1.5238 7.3773 22 1 3.2024 -2.6212 5.2667 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 1.6886 1.8463 0.8900 27 1 1.6887 1.8463 -0.8899 28 1 3.6091 -0.6971 -1.0456 29 1 3.5762 0.7327 -2.1053 30 1 5.5642 2.3389 0.1254 31 1 7.6431 3.1857 1.1264 32 1 8.3770 2.3964 3.3367 33 1 7.0621 0.7434 4.5604 34 1 5.2289 0.6446 6.7766 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001230276621.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 02:08:24 Heat of formation + Delta-G solvation = -69.956713 kcal Electronic energy + Delta-G solvation = -18847.611545 eV Core-core repulsion = 15771.887150 eV Total energy + Delta-G solvation = -3075.724395 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.12551 -37.63451 -36.15160 -35.35088 -33.47868 -31.73367 -29.52076 -28.40636 -27.08015 -25.51712 -24.99626 -22.27873 -20.68253 -19.79758 -17.63372 -16.86469 -16.15710 -15.73331 -15.46229 -15.01265 -14.38438 -14.19437 -14.08129 -13.51376 -13.25752 -12.75553 -12.52725 -12.26646 -11.93119 -11.78708 -11.41821 -11.12398 -11.08225 -10.93972 -10.73591 -10.49802 -10.35215 -10.04638 -9.72550 -9.59223 -9.44394 -9.22342 -9.04133 -7.33153 -6.87817 -6.59730 -4.13388 2.62162 2.85646 3.09009 3.15908 3.21460 3.29422 3.84011 4.06099 4.12592 4.73493 4.85555 5.07698 5.22217 5.30851 5.37657 5.43194 5.61726 5.69612 5.70983 5.78629 5.96106 6.22208 6.40459 6.55211 7.03087 7.18933 7.23018 7.40479 7.41937 7.83748 7.87266 8.15889 8.32928 8.48443 8.81282 8.96861 9.17806 10.33391 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.014333 B = 0.008093 C = 0.005842 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1953.014053 B = 3458.787644 C = 4791.925526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.378 6.378 3 C 0.065 3.935 4 C 0.076 3.924 5 H 0.093 0.907 6 C -0.049 4.049 7 Cl -0.171 7.171 8 O -0.283 6.283 9 C 0.012 3.988 10 C -0.164 4.164 11 C -0.213 4.213 12 C -0.127 4.127 13 C -0.144 4.144 14 C 0.104 3.896 15 C -0.450 4.450 16 H 0.082 0.918 17 C 0.076 3.924 18 N -0.801 5.801 19 Si 0.904 3.096 20 H -0.269 1.269 21 H -0.280 1.280 22 H -0.262 1.262 23 H 0.036 0.964 24 H 0.084 0.916 25 H 0.042 0.958 26 H 0.066 0.934 27 H 0.060 0.940 28 H 0.105 0.895 29 H 0.092 0.908 30 H 0.099 0.901 31 H 0.086 0.914 32 H 0.086 0.914 33 H 0.114 0.886 34 H 0.278 0.722 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.408 1.007 -9.897 11.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.296 6.296 3 C -0.012 4.012 4 C 0.018 3.982 5 H 0.111 0.889 6 C -0.112 4.112 7 Cl -0.145 7.145 8 O -0.197 6.197 9 C -0.032 4.032 10 C -0.182 4.182 11 C -0.232 4.232 12 C -0.145 4.145 13 C -0.164 4.164 14 C 0.102 3.898 15 C -0.480 4.480 16 H 0.100 0.900 17 C -0.140 4.140 18 N -0.427 5.427 19 Si 0.729 3.271 20 H -0.194 1.194 21 H -0.206 1.206 22 H -0.186 1.186 23 H 0.055 0.945 24 H 0.103 0.897 25 H 0.060 0.940 26 H 0.084 0.916 27 H 0.078 0.922 28 H 0.124 0.876 29 H 0.110 0.890 30 H 0.117 0.883 31 H 0.104 0.896 32 H 0.104 0.896 33 H 0.132 0.868 34 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -6.266 0.768 -9.580 11.473 hybrid contribution -0.302 -0.140 0.313 0.457 sum -6.569 0.628 -9.267 11.376 Atomic orbital electron populations 1.22725 0.81492 1.02666 0.99659 1.87986 1.19214 1.27109 1.95303 1.22709 0.91880 0.85606 1.00967 1.22493 0.92514 0.97600 0.85617 0.88926 1.24832 0.81416 1.05074 0.99892 1.98736 1.17691 1.99171 1.98880 1.86153 1.39634 1.58798 1.35158 1.19173 0.87749 0.99820 0.96477 1.20657 0.97486 1.01235 0.98853 1.20089 0.99264 1.06287 0.97592 1.20344 0.99201 0.99601 0.95370 1.20709 0.94505 1.00652 1.00543 1.16995 0.91919 0.92704 0.88220 1.19379 1.23813 1.14223 0.90594 0.90012 1.25841 0.93600 0.96424 0.98176 1.69852 1.36482 1.27460 1.08926 0.86385 0.79734 0.82432 0.78597 1.19430 1.20583 1.18606 0.94539 0.89732 0.93959 0.91597 0.92196 0.87633 0.89000 0.88346 0.89602 0.89571 0.86779 0.91150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.35 11.01 101.05 1.11 1.46 16 2 O -0.38 -5.75 9.89 -40.08 -0.40 -6.15 16 3 C 0.07 0.92 5.81 37.16 0.22 1.14 16 4 C 0.08 1.29 2.56 -26.73 -0.07 1.22 16 5 H 0.09 1.52 5.55 -51.93 -0.29 1.23 16 6 C -0.05 -0.73 6.05 37.16 0.22 -0.51 16 7 Cl -0.17 -2.98 25.53 -51.86 -1.32 -4.31 16 8 O -0.28 -6.43 9.01 -23.44 -0.21 -6.64 16 9 C 0.01 0.29 6.25 -38.33 -0.24 0.05 16 10 C -0.16 -3.69 7.14 -39.48 -0.28 -3.97 16 11 C -0.21 -4.87 10.04 -39.34 -0.39 -5.27 16 12 C -0.13 -3.05 9.97 -40.00 -0.40 -3.45 16 13 C -0.14 -3.84 8.62 -39.27 -0.34 -4.18 16 14 C 0.10 2.86 5.53 -106.68 -0.59 2.27 16 15 C -0.45 -12.47 8.66 -37.84 -0.33 -12.80 16 16 H 0.08 2.29 7.74 -52.49 -0.41 1.88 16 17 C 0.08 1.98 5.07 -17.33 -0.09 1.89 16 18 N -0.80 -21.33 11.33 55.55 0.63 -20.70 16 19 Si 0.90 19.59 29.60 -169.99 -5.03 14.56 16 20 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 21 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 22 H -0.26 -5.67 7.11 56.52 0.40 -5.27 16 23 H 0.04 0.32 8.14 -51.93 -0.42 -0.10 16 24 H 0.08 0.83 8.14 -51.93 -0.42 0.41 16 25 H 0.04 0.46 8.14 -51.93 -0.42 0.03 16 26 H 0.07 0.97 8.14 -51.92 -0.42 0.54 16 27 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 28 H 0.11 1.65 7.73 -51.93 -0.40 1.25 16 29 H 0.09 1.05 8.14 -51.93 -0.42 0.62 16 30 H 0.10 1.96 4.78 -52.49 -0.25 1.71 16 31 H 0.09 1.75 8.06 -52.48 -0.42 1.33 16 32 H 0.09 1.86 8.06 -52.49 -0.42 1.44 16 33 H 0.11 3.11 6.52 -52.48 -0.34 2.77 16 34 H 0.28 6.76 8.30 -40.82 -0.34 6.42 16 LS Contribution 298.96 15.07 4.51 4.51 Total: -1.00 -30.06 298.96 -7.21 -37.27 By element: Atomic # 1 Polarization: 7.82 SS G_CDS: -4.20 Total: 3.61 kcal Atomic # 6 Polarization: -20.97 SS G_CDS: -1.17 Total: -22.15 kcal Atomic # 7 Polarization: -21.33 SS G_CDS: 0.63 Total: -20.70 kcal Atomic # 8 Polarization: -12.18 SS G_CDS: -0.61 Total: -12.79 kcal Atomic # 14 Polarization: 19.59 SS G_CDS: -5.03 Total: 14.56 kcal Atomic # 17 Polarization: -2.98 SS G_CDS: -1.32 Total: -4.31 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -30.06 -7.21 -37.27 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001230276621.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.685 kcal (2) G-P(sol) polarization free energy of solvation -30.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.272 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds