Wall clock time and date at job start Mon Mar 30 2020 01:16:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.50702 * 109.46831 * 2 1 4 4 C 1.38291 * 119.99820 * 266.41144 * 3 2 1 5 5 C 1.38209 * 120.14187 * 180.02562 * 4 3 2 6 6 C 1.38288 * 120.15069 * 359.97438 * 5 4 3 7 7 C 1.38520 * 119.99730 * 0.27991 * 6 5 4 8 8 O 1.35996 * 120.07342 * 179.72860 * 7 6 5 9 9 C 1.38525 * 120.00338 * 86.43777 * 3 2 1 10 10 O 1.35990 * 120.06864 * 359.97438 * 9 3 2 11 11 C 1.42904 * 117.00171 * 106.59752 * 10 9 3 12 12 H 1.08993 * 109.46910 * 36.04788 * 11 10 9 13 13 C 1.50701 * 109.47268 * 156.05177 * 11 10 9 14 14 H 1.08001 * 119.99815 * 359.97438 * 13 11 10 15 15 C 1.37874 * 120.00051 * 179.97438 * 13 11 10 16 16 N 1.31514 * 119.99980 * 0.02562 * 15 13 11 17 17 Si 1.86802 * 120.00100 * 179.97438 * 15 13 11 18 18 H 1.48500 * 109.46803 * 90.00029 * 17 15 13 19 19 H 1.48498 * 109.47147 * 210.00326 * 17 15 13 20 20 H 1.48500 * 109.47156 * 330.00486 * 17 15 13 21 21 C 1.53004 * 109.46892 * 276.05018 * 11 10 9 22 22 Cl 1.80298 * 109.46998 * 67.08185 * 21 11 10 23 23 H 1.09005 * 109.47434 * 60.00364 * 1 2 3 24 24 H 1.09003 * 109.47259 * 179.97438 * 1 2 3 25 25 H 1.08998 * 109.47214 * 300.00184 * 1 2 3 26 26 H 1.09006 * 109.47144 * 240.00137 * 2 1 3 27 27 H 1.08997 * 109.47662 * 119.99863 * 2 1 3 28 28 H 1.07992 * 119.92943 * 0.02562 * 4 3 2 29 29 H 1.08009 * 119.92457 * 179.97438 * 5 4 3 30 30 H 1.08004 * 119.99785 * 180.02562 * 6 5 4 31 31 H 0.96697 * 114.00550 * 89.99433 * 8 7 6 32 32 H 0.96996 * 120.00207 * 179.97438 * 16 15 13 33 33 H 1.09000 * 109.46525 * 187.07675 * 21 11 10 34 34 H 1.08993 * 109.47117 * 307.08097 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 6 2.3333 2.0478 -1.1953 5 6 2.7946 3.3506 -1.1987 6 6 2.9567 4.0332 -0.0070 7 6 2.6619 3.4093 1.1941 8 8 2.8259 4.0773 2.3672 9 6 2.1928 2.0988 1.1973 10 8 1.8971 1.4837 2.3736 11 6 2.9986 1.0848 3.1919 12 1 3.7958 1.8240 3.1137 13 6 2.5476 0.9822 4.6262 14 1 1.5224 1.2003 4.8868 15 6 3.4437 0.6100 5.6057 16 7 4.6922 0.3450 5.2884 17 14 2.8848 0.4836 7.3837 18 1 2.3991 -0.8937 7.6530 19 1 4.0249 0.7914 8.2840 20 1 1.7860 1.4524 7.6273 21 6 3.5168 -0.2758 2.7217 22 17 4.2467 -0.1069 1.0817 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8899 26 1 1.8933 -0.5138 -0.8900 27 1 1.8933 -0.5138 0.8899 28 1 2.2077 1.5182 -2.1281 29 1 3.0292 3.8367 -2.1343 30 1 3.3170 5.0513 -0.0126 31 1 2.0421 4.5647 2.6553 32 1 5.3227 0.0835 5.9776 33 1 4.2716 -0.6380 3.4197 34 1 2.6901 -0.9849 2.6802 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001230371043.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:16:59 Heat of formation + Delta-G solvation = -78.451303 kcal Electronic energy + Delta-G solvation = -19398.948014 eV Core-core repulsion = 16322.855265 eV Total energy + Delta-G solvation = -3076.092748 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.081 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.78520 -36.88482 -36.38922 -34.72147 -33.44311 -33.04664 -29.72520 -28.69702 -28.05575 -25.25992 -23.53179 -22.38348 -20.83212 -20.42744 -17.58843 -16.88588 -16.72880 -15.78323 -15.08222 -14.99357 -14.28470 -13.65402 -13.60052 -13.46116 -13.16041 -12.71371 -12.51512 -12.10681 -11.92349 -11.70520 -11.50741 -11.10445 -11.07378 -10.96652 -10.84761 -10.53527 -10.36626 -10.24688 -9.85723 -9.27244 -9.17916 -8.88471 -8.51240 -8.11369 -7.62859 -6.31986 -4.38759 1.69559 1.76235 3.17654 3.25127 3.29171 3.48727 3.92636 4.22288 4.67926 4.94398 5.04879 5.19897 5.27544 5.57176 5.70006 5.75392 5.84486 5.97499 6.08828 6.23175 6.30594 6.34194 6.41758 6.51326 6.70341 6.77318 6.84439 6.94862 7.04459 7.21997 7.37625 7.63419 7.92268 8.15502 8.53855 8.84260 9.28230 10.75044 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.021612 B = 0.007404 C = 0.006784 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1295.246165 B = 3780.744436 C = 4126.280344 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.079 4.079 3 C -0.069 4.069 4 C -0.121 4.121 5 C -0.127 4.127 6 C -0.145 4.145 7 C 0.074 3.926 8 O -0.484 6.484 9 C 0.108 3.892 10 O -0.332 6.332 11 C 0.227 3.773 12 H 0.044 0.956 13 C -0.512 4.512 14 H 0.073 0.927 15 C 0.062 3.938 16 N -0.889 5.889 17 Si 0.914 3.086 18 H -0.277 1.277 19 H -0.283 1.283 20 H -0.270 1.270 21 C -0.042 4.042 22 Cl -0.240 7.240 23 H 0.046 0.954 24 H 0.051 0.949 25 H 0.060 0.940 26 H 0.061 0.939 27 H 0.086 0.914 28 H 0.117 0.883 29 H 0.118 0.882 30 H 0.121 0.879 31 H 0.383 0.617 32 H 0.270 0.730 33 H 0.130 0.870 34 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.837 2.262 -9.376 10.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.117 4.117 3 C -0.070 4.070 4 C -0.139 4.139 5 C -0.146 4.146 6 C -0.164 4.164 7 C 0.028 3.972 8 O -0.293 6.293 9 C 0.063 3.937 10 O -0.249 6.249 11 C 0.173 3.827 12 H 0.062 0.938 13 C -0.550 4.550 14 H 0.091 0.909 15 C -0.141 4.141 16 N -0.527 5.527 17 Si 0.740 3.260 18 H -0.203 1.203 19 H -0.209 1.209 20 H -0.195 1.195 21 C -0.104 4.104 22 Cl -0.214 7.214 23 H 0.065 0.935 24 H 0.070 0.930 25 H 0.079 0.921 26 H 0.080 0.920 27 H 0.104 0.896 28 H 0.135 0.865 29 H 0.136 0.864 30 H 0.139 0.861 31 H 0.238 0.762 32 H 0.080 0.920 33 H 0.148 0.852 34 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -4.202 1.928 -9.327 10.410 hybrid contribution -0.267 0.165 0.820 0.878 sum -4.469 2.093 -8.507 9.835 Atomic orbital electron populations 1.21736 0.95535 1.01084 1.01721 1.20587 0.95198 0.92598 1.03271 1.19889 0.99245 0.95967 0.91882 1.20800 1.01242 0.94984 0.96902 1.20785 1.01651 0.94974 0.97147 1.21206 1.03136 1.00321 0.91752 1.18936 1.00895 0.91590 0.85730 1.84900 1.40080 1.67389 1.36916 1.19054 0.96626 0.90628 0.87392 1.85995 1.35403 1.75599 1.27934 1.20329 0.84428 0.90018 0.87909 0.93785 1.20960 0.97796 1.47310 0.88955 0.90861 1.24967 0.94603 0.94560 0.99966 1.69820 1.03152 1.45373 1.34315 0.86228 0.78398 0.78640 0.82686 1.20323 1.20877 1.19498 1.25914 1.00451 1.03356 0.80720 1.98635 1.87097 1.98592 1.37121 0.93485 0.92976 0.92130 0.91994 0.89564 0.86452 0.86427 0.86092 0.76241 0.92033 0.85213 0.91064 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.09 9.89 37.15 0.37 -1.73 16 2 C -0.08 -1.32 4.68 -27.89 -0.13 -1.45 16 3 C -0.07 -1.24 3.53 -104.50 -0.37 -1.61 16 4 C -0.12 -1.89 9.68 -39.57 -0.38 -2.27 16 5 C -0.13 -1.89 10.04 -39.57 -0.40 -2.28 16 6 C -0.15 -2.38 9.98 -39.46 -0.39 -2.77 16 7 C 0.07 1.43 6.44 -39.12 -0.25 1.17 16 8 O -0.48 -9.42 12.59 -34.21 -0.43 -9.86 16 9 C 0.11 2.22 4.69 -39.12 -0.18 2.03 16 10 O -0.33 -7.69 8.70 -34.19 -0.30 -7.99 16 11 C 0.23 5.72 2.19 -27.88 -0.06 5.66 16 12 H 0.04 1.26 7.26 -51.93 -0.38 0.88 16 13 C -0.51 -13.65 8.89 -34.44 -0.31 -13.96 16 14 H 0.07 1.95 7.81 -52.49 -0.41 1.54 16 15 C 0.06 1.62 5.28 -17.82 -0.09 1.52 16 16 N -0.89 -24.07 11.29 55.43 0.63 -23.44 16 17 Si 0.91 20.36 29.54 -169.99 -5.02 15.34 16 18 H -0.28 -6.08 7.11 56.52 0.40 -5.67 16 19 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 20 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 21 C -0.04 -0.98 5.43 37.16 0.20 -0.78 16 22 Cl -0.24 -5.08 23.61 -51.86 -1.22 -6.31 16 23 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 26 H 0.06 0.93 8.06 -51.93 -0.42 0.51 16 27 H 0.09 1.63 4.38 -51.93 -0.23 1.40 16 28 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 29 H 0.12 1.38 8.06 -52.48 -0.42 0.95 16 30 H 0.12 1.71 8.06 -52.48 -0.42 1.28 16 31 H 0.38 5.60 9.06 45.56 0.41 6.01 16 32 H 0.27 6.92 8.31 -40.82 -0.34 6.58 16 33 H 0.13 3.31 5.91 -51.93 -0.31 3.00 16 34 H 0.07 1.59 7.30 -51.93 -0.38 1.21 16 LS Contribution 294.47 15.07 4.44 4.44 Total: -1.00 -28.64 294.47 -7.29 -35.93 By element: Atomic # 1 Polarization: 11.72 SS G_CDS: -3.38 Total: 8.34 kcal Atomic # 6 Polarization: -14.46 SS G_CDS: -2.00 Total: -16.46 kcal Atomic # 7 Polarization: -24.07 SS G_CDS: 0.63 Total: -23.44 kcal Atomic # 8 Polarization: -17.11 SS G_CDS: -0.73 Total: -17.84 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.02 Total: 15.34 kcal Atomic # 17 Polarization: -5.08 SS G_CDS: -1.22 Total: -6.31 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -28.64 -7.29 -35.93 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001230371043.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.525 kcal (2) G-P(sol) polarization free energy of solvation -28.638 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.926 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds