Wall clock time and date at job start Mon Mar 30 2020 01:21:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 O 1.21343 * 119.99891 * 2 1 4 4 C 1.46463 * 120.00269 * 179.72113 * 2 1 3 5 5 C 1.40369 * 120.21772 * 0.27890 * 4 2 1 6 6 F 1.35103 * 120.08780 * 359.95395 * 5 4 2 7 7 C 1.37912 * 119.82955 * 179.97438 * 5 4 2 8 8 C 1.38788 * 120.27964 * 359.97438 * 7 5 4 9 9 F 1.35107 * 119.77219 * 180.02562 * 8 7 5 10 10 C 1.38459 * 120.44912 * 0.02562 * 8 7 5 11 11 C 1.38445 * 120.16162 * 359.69942 * 10 8 7 12 12 O 1.35607 * 120.14563 * 180.29506 * 11 10 8 13 13 C 1.42903 * 116.99688 * 0.25914 * 12 11 10 14 14 C 1.53000 * 109.47313 * 179.97438 * 13 12 11 15 15 C 1.50695 * 109.47385 * 179.97438 * 14 13 12 16 16 H 1.08002 * 120.00120 * 0.02562 * 15 14 13 17 17 C 1.37880 * 120.00349 * 179.97438 * 15 14 13 18 18 N 1.31511 * 119.99361 * 359.97438 * 17 15 14 19 19 Si 1.86797 * 120.00100 * 180.02562 * 17 15 14 20 20 H 1.48499 * 109.47471 * 90.00196 * 19 17 15 21 21 H 1.48501 * 109.46705 * 210.00134 * 19 17 15 22 22 H 1.48495 * 109.47207 * 329.99725 * 19 17 15 23 23 H 1.09001 * 109.47438 * 0.02562 * 1 2 3 24 24 H 1.09004 * 109.46801 * 120.00388 * 1 2 3 25 25 H 1.09000 * 109.46987 * 239.99619 * 1 2 3 26 26 H 1.07996 * 119.85838 * 179.97438 * 7 5 4 27 27 H 1.08001 * 119.91500 * 179.97438 * 10 8 7 28 28 H 1.09003 * 109.47029 * 299.99670 * 13 12 11 29 29 H 1.08994 * 109.47206 * 59.99679 * 13 12 11 30 30 H 1.09003 * 109.46889 * 299.99861 * 14 13 12 31 31 H 1.08999 * 109.47128 * 59.99278 * 14 13 12 32 32 H 0.97003 * 119.99785 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1137 1.0509 0.0000 4 6 2.2393 -1.2684 0.0062 5 6 1.5422 -2.4867 0.0062 6 9 0.1912 -2.4940 0.0015 7 6 2.2399 -3.6763 0.0115 8 6 3.6278 -3.6736 0.0163 9 9 4.3009 -4.8450 0.0209 10 6 4.3271 -2.4786 0.0163 11 6 3.6454 -1.2737 0.0053 12 8 4.3307 -0.1035 -0.0007 13 6 5.7573 -0.1872 -0.0009 14 6 6.3509 1.2229 -0.0087 15 6 7.8553 1.1346 -0.0083 16 1 8.3396 0.1693 -0.0034 17 6 8.6135 2.2862 -0.0152 18 7 8.0237 3.4616 -0.0226 19 14 10.4783 2.1767 -0.0153 20 1 10.9719 2.1398 -1.4154 21 1 11.0437 3.3621 0.6777 22 1 10.9017 0.9414 0.6916 23 1 -0.3634 1.0276 -0.0005 24 1 -0.3633 -0.5139 -0.8900 25 1 -0.3633 -0.5139 0.8900 26 1 1.7040 -4.6139 0.0119 27 1 5.4071 -2.4865 0.0204 28 1 6.0902 -0.7171 0.8916 29 1 6.0895 -0.7258 -0.8883 30 1 6.0179 1.7523 -0.9014 31 1 6.0186 1.7619 0.8785 32 1 8.5571 4.2719 -0.0271 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000129035450.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:21:58 Heat of formation + Delta-G solvation = -146.331780 kcal Electronic energy + Delta-G solvation = -20024.024460 eV Core-core repulsion = 16393.191513 eV Total energy + Delta-G solvation = -3630.832947 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.085 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -49.44835 -49.27352 -40.33981 -38.48392 -37.06362 -33.44116 -31.67743 -30.74205 -29.92684 -29.05661 -25.26279 -23.87055 -22.79854 -21.15466 -20.24595 -18.78898 -17.51163 -16.87735 -16.57014 -16.51487 -15.95357 -15.78270 -15.66923 -15.44670 -14.67946 -14.58020 -14.54443 -14.48795 -14.27883 -13.26471 -12.69363 -12.46334 -12.36153 -12.05872 -12.02158 -11.77552 -11.33205 -11.05689 -10.91777 -10.67687 -10.01646 -9.76307 -9.60140 -9.34423 -9.05001 -8.50991 -8.42547 -6.12442 -4.18390 0.31628 0.95404 2.31602 3.10009 3.25887 3.32490 3.32840 3.35213 3.70686 4.02042 4.13276 4.36911 4.47980 4.66611 4.88682 5.10293 5.23754 5.34618 5.39859 5.46482 5.57942 5.65258 5.76307 5.83878 5.89443 6.11550 6.38963 6.52169 7.32966 7.59117 7.62682 7.70742 7.90353 8.17664 8.87065 9.46180 10.98826 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.022666 B = 0.004651 C = 0.003873 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1235.036883 B = 6019.090204 C = 7228.366989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C 0.387 3.613 3 O -0.423 6.423 4 C -0.263 4.263 5 C 0.212 3.788 6 F -0.117 7.117 7 C -0.256 4.256 8 C 0.202 3.798 9 F -0.124 7.124 10 C -0.274 4.274 11 C 0.254 3.746 12 O -0.268 6.268 13 C 0.053 3.947 14 C 0.027 3.973 15 C -0.530 4.530 16 H 0.059 0.941 17 C 0.062 3.938 18 N -0.886 5.886 19 Si 0.900 3.100 20 H -0.279 1.279 21 H -0.284 1.284 22 H -0.273 1.273 23 H 0.082 0.918 24 H 0.091 0.909 25 H 0.091 0.909 26 H 0.152 0.848 27 H 0.157 0.843 28 H 0.059 0.941 29 H 0.059 0.941 30 H 0.031 0.969 31 H 0.031 0.969 32 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.085 -14.165 0.067 19.976 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.252 4.252 2 C 0.263 3.737 3 O -0.296 6.296 4 C -0.266 4.266 5 C 0.191 3.809 6 F -0.095 7.095 7 C -0.275 4.275 8 C 0.182 3.818 9 F -0.103 7.103 10 C -0.294 4.294 11 C 0.202 3.798 12 O -0.176 6.176 13 C -0.020 4.020 14 C -0.010 4.010 15 C -0.568 4.568 16 H 0.077 0.923 17 C -0.141 4.141 18 N -0.524 5.524 19 Si 0.727 3.273 20 H -0.205 1.205 21 H -0.210 1.210 22 H -0.198 1.198 23 H 0.101 0.899 24 H 0.110 0.890 25 H 0.110 0.890 26 H 0.170 0.830 27 H 0.175 0.825 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.049 0.951 31 H 0.049 0.951 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -13.793 -13.202 0.068 19.093 hybrid contribution 1.069 -0.635 -0.011 1.243 sum -12.724 -13.836 0.058 18.797 Atomic orbital electron populations 1.22382 0.93566 1.04799 1.04473 1.21887 0.91320 0.87116 0.73354 1.90712 1.71560 1.33085 1.34265 1.19921 0.91887 0.95076 1.19747 1.16929 0.76655 0.92091 0.95185 1.91537 1.27987 1.97162 1.92839 1.20671 0.92887 0.98745 1.15230 1.17132 0.88919 0.80889 0.94898 1.91554 1.80250 1.45575 1.92889 1.21359 1.02690 0.90558 1.14806 1.18743 0.89925 0.86061 0.85042 1.86450 1.23182 1.24961 1.83054 1.23685 0.73565 1.04463 1.00302 1.19129 0.94715 0.87755 0.99379 1.20933 0.90153 0.92918 1.52817 0.92319 1.24989 0.99069 0.95222 0.94811 1.69984 1.35738 0.97436 1.49234 0.86477 0.84853 0.77746 0.78245 1.20467 1.21008 1.19753 0.89904 0.89013 0.89004 0.83031 0.82513 0.92295 0.92305 0.95081 0.95072 0.92616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -2.05 8.51 36.00 0.31 -1.74 16 2 C 0.39 5.89 7.20 -31.00 -0.22 5.67 16 3 O -0.42 -8.43 15.89 -16.44 -0.26 -8.69 16 4 C -0.26 -3.81 5.89 -104.89 -0.62 -4.43 16 5 C 0.21 2.42 7.26 -38.90 -0.28 2.14 16 6 F -0.12 -1.15 13.75 2.25 0.03 -1.12 16 7 C -0.26 -2.69 9.98 -39.50 -0.39 -3.08 16 8 C 0.20 2.42 7.30 -39.30 -0.29 2.14 16 9 F -0.12 -1.47 17.26 2.25 0.04 -1.43 16 10 C -0.27 -3.83 9.00 -39.42 -0.35 -4.18 16 11 C 0.25 4.15 6.70 -38.61 -0.26 3.90 16 12 O -0.27 -5.41 8.20 -40.46 -0.33 -5.74 16 13 C 0.05 1.10 4.68 37.16 0.17 1.27 16 14 C 0.03 0.71 5.34 -27.89 -0.15 0.56 16 15 C -0.53 -14.57 9.11 -34.44 -0.31 -14.89 16 16 H 0.06 1.52 7.74 -52.49 -0.41 1.12 16 17 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 18 N -0.89 -26.40 13.29 55.43 0.74 -25.66 16 19 Si 0.90 21.10 29.54 -169.99 -5.02 16.08 16 20 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 21 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 22 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 23 H 0.08 0.84 8.12 -51.93 -0.42 0.42 16 24 H 0.09 0.81 7.41 -51.93 -0.38 0.42 16 25 H 0.09 0.81 7.40 -51.93 -0.38 0.43 16 26 H 0.15 1.20 8.06 -52.49 -0.42 0.78 16 27 H 0.16 2.11 6.29 -52.49 -0.33 1.78 16 28 H 0.06 1.12 7.65 -51.93 -0.40 0.72 16 29 H 0.06 1.11 7.67 -51.93 -0.40 0.72 16 30 H 0.03 0.87 8.14 -51.93 -0.42 0.45 16 31 H 0.03 0.87 8.14 -51.93 -0.42 0.45 16 32 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 LS Contribution 290.59 15.07 4.38 4.38 Total: -1.00 -30.90 290.59 -6.05 -36.95 By element: Atomic # 1 Polarization: -0.64 SS G_CDS: -3.13 Total: -3.76 kcal Atomic # 6 Polarization: -8.51 SS G_CDS: -2.50 Total: -11.00 kcal Atomic # 7 Polarization: -26.40 SS G_CDS: 0.74 Total: -25.66 kcal Atomic # 8 Polarization: -13.84 SS G_CDS: -0.59 Total: -14.43 kcal Atomic # 9 Polarization: -2.62 SS G_CDS: 0.07 Total: -2.55 kcal Atomic # 14 Polarization: 21.10 SS G_CDS: -5.02 Total: 16.08 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -30.90 -6.05 -36.95 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000129035450.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.383 kcal (2) G-P(sol) polarization free energy of solvation -30.898 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.280 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.949 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds