Wall clock time and date at job start Mon Mar 30 2020 01:05:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 N 1.46498 * 109.47511 * 127.40679 * 3 2 1 5 5 C 1.36930 * 120.00497 * 264.61678 * 4 3 2 6 6 H 1.07994 * 120.00440 * 132.82365 * 5 4 3 7 7 C 1.38974 * 119.99389 * 313.09699 * 5 4 3 8 8 N 1.31419 * 119.99970 * 168.20144 * 7 5 4 9 9 Si 1.86801 * 120.00352 * 348.20002 * 7 5 4 10 10 H 1.48501 * 109.46949 * 95.04322 * 9 7 5 11 11 H 1.48497 * 109.47214 * 215.04188 * 9 7 5 12 12 H 1.48495 * 109.47080 * 335.04551 * 9 7 5 13 13 C 1.34782 * 119.99671 * 84.60385 * 4 3 2 14 14 O 1.21717 * 120.00046 * 354.72940 * 13 4 3 15 15 C 1.46702 * 120.00014 * 174.71956 * 13 4 3 16 16 C 1.40481 * 126.55029 * 352.66831 * 15 13 4 17 17 N 1.30959 * 108.76382 * 179.81311 * 16 15 13 18 18 N 1.39709 * 109.51152 * 0.45617 * 17 16 15 19 19 C 1.36371 * 133.18178 * 179.73890 * 18 17 16 20 20 C 1.35314 * 119.79752 * 180.02562 * 19 18 17 21 21 N 1.33239 * 121.26718 * 359.96072 * 20 19 18 22 22 C 1.31433 * 121.08150 * 0.02562 * 21 20 19 23 23 C 1.36848 * 107.97897 * 359.70932 * 18 17 16 24 24 H 4.40645 * 5.51334 * 180.02562 * 4 1 2 25 25 H 1.09002 * 109.47309 * 7.41101 * 3 2 1 26 26 H 1.09004 * 109.47293 * 247.41410 * 3 2 1 27 27 H 0.96995 * 120.00308 * 179.97438 * 8 7 5 28 28 H 1.07998 * 125.61710 * 359.96637 * 16 15 13 29 29 H 1.07996 * 120.10334 * 0.02562 * 19 18 17 30 30 H 1.08002 * 119.36673 * 179.97438 * 20 19 18 31 31 H 1.08008 * 120.17684 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1340 0.8399 -1.0971 5 6 3.4674 0.2719 -2.2976 6 1 3.1102 0.7076 -3.2189 7 6 4.2609 -0.8686 -2.3301 8 7 4.3914 -1.5467 -3.4482 9 14 5.1419 -1.4379 -0.7844 10 1 4.3179 -2.4622 -0.0938 11 1 6.4559 -2.0245 -1.1512 12 1 5.3523 -0.2795 0.1205 13 6 3.2546 2.1712 -0.9249 14 8 2.8686 2.6888 0.1069 15 6 3.8512 2.9964 -1.9809 16 6 4.4689 2.5345 -3.1550 17 7 4.8742 3.5666 -3.8519 18 7 4.5548 4.7439 -3.1709 19 6 4.7525 6.0646 -3.4469 20 6 4.3225 7.0056 -2.5748 21 7 3.7046 6.6690 -1.4433 22 6 3.4918 5.4091 -1.1353 23 6 3.9196 4.4004 -2.0084 24 1 -1.0501 0.0000 0.0004 25 1 3.0098 -1.0183 -0.1326 26 1 3.0091 0.3955 0.9489 27 1 4.9454 -2.3425 -3.4710 28 1 4.5876 1.4989 -3.4377 29 1 5.2507 6.3587 -4.3589 30 1 4.4831 8.0496 -2.8002 31 1 2.9891 5.1528 -0.2144 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000302358096.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:06 Heat of formation + Delta-G solvation = 164.286081 kcal Electronic energy + Delta-G solvation = -19924.239488 eV Core-core repulsion = 16789.857880 eV Total energy + Delta-G solvation = -3134.381608 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -42.05096 -38.97072 -37.75445 -35.30472 -33.38942 -32.72070 -31.73488 -30.92248 -29.17012 -26.81423 -25.23611 -24.41173 -23.08662 -21.72651 -19.43978 -18.61764 -18.01662 -17.13235 -16.76958 -16.05316 -15.66226 -15.41996 -15.11756 -14.49234 -14.31468 -13.93229 -13.31706 -13.15564 -12.85259 -12.71510 -12.47571 -12.43785 -12.03644 -11.19004 -10.82048 -10.68608 -10.47922 -10.28704 -9.86730 -9.80057 -9.46159 -9.39237 -9.34317 -8.83583 -7.99887 -7.47276 -6.64942 -4.40232 0.65567 1.12109 2.32736 2.75024 2.95194 3.11715 3.17273 3.26964 3.50468 3.51506 3.96176 4.21241 4.23684 4.38297 4.55361 4.61654 4.75494 5.10626 5.20432 5.29012 5.55125 5.72810 5.84868 5.96658 6.10449 6.26297 6.47259 6.51528 6.77312 7.03334 7.20015 7.76918 7.80180 7.87537 8.01583 8.25145 8.74463 9.11746 9.48587 10.41802 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.020821 B = 0.007134 C = 0.005911 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1344.456939 B = 3924.161282 C = 4736.173352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.163 4.163 3 C 0.205 3.795 4 N -0.459 5.459 5 C -0.352 4.352 6 H 0.110 0.890 7 C 0.069 3.931 8 N -0.854 5.854 9 Si 0.875 3.125 10 H -0.269 1.269 11 H -0.282 1.282 12 H -0.255 1.255 13 C 0.568 3.432 14 O -0.592 6.592 15 C -0.230 4.230 16 C 0.127 3.873 17 N -0.323 5.323 18 N -0.260 5.260 19 C 0.064 3.936 20 C 0.009 3.991 21 N -0.460 5.460 22 C 0.172 3.828 23 C 0.069 3.931 24 H 0.211 0.789 25 H 0.090 0.910 26 H 0.092 0.908 27 H 0.280 0.720 28 H 0.243 0.757 29 H 0.174 0.826 30 H 0.178 0.822 31 H 0.192 0.808 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.612 8.254 1.310 8.380 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.247 4.247 2 C -0.164 4.164 3 C 0.084 3.916 4 N -0.179 5.179 5 C -0.480 4.480 6 H 0.127 0.873 7 C -0.141 4.141 8 N -0.488 5.488 9 Si 0.701 3.299 10 H -0.196 1.196 11 H -0.208 1.208 12 H -0.178 1.178 13 C 0.359 3.641 14 O -0.477 6.477 15 C -0.248 4.248 16 C -0.050 4.050 17 N -0.147 5.147 18 N -0.028 5.028 19 C -0.066 4.066 20 C -0.133 4.133 21 N -0.172 5.172 22 C -0.008 4.008 23 C -0.053 4.053 24 H 0.228 0.772 25 H 0.108 0.892 26 H 0.110 0.890 27 H 0.091 0.909 28 H 0.259 0.741 29 H 0.191 0.809 30 H 0.195 0.805 31 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges 0.965 9.392 0.972 9.491 hybrid contribution 0.147 -1.471 0.500 1.560 sum 1.112 7.921 1.471 8.133 Atomic orbital electron populations 1.24649 0.95636 1.02368 1.02014 1.23690 0.94858 0.98877 0.98998 1.18703 0.83931 0.96232 0.92778 1.43335 1.57346 1.04679 1.12531 1.19173 1.31741 1.12475 0.84576 0.87293 1.25521 0.95459 0.95722 0.97387 1.69674 1.36246 1.16137 1.26729 0.86871 0.79693 0.80012 0.83326 1.19551 1.20780 1.17839 1.17016 0.79736 0.82216 0.85124 1.90646 1.54252 1.73211 1.29555 1.19832 1.14750 0.89262 1.00949 1.26106 0.88989 0.99983 0.89941 1.77782 1.28868 0.87888 1.20210 1.46385 1.35700 1.06288 1.14377 1.22499 1.01859 0.79553 1.02650 1.22228 1.00208 0.99858 0.90959 1.68226 1.12322 1.19278 1.17366 1.23215 0.94073 0.85101 0.98384 1.20367 0.99270 0.95858 0.89793 0.77179 0.89206 0.89035 0.90926 0.74127 0.80881 0.80528 0.79151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -4.20 19.25 29.55 0.57 -3.63 16 2 C -0.16 -3.43 13.61 -37.13 -0.51 -3.93 16 3 C 0.21 4.44 4.25 -6.83 -0.03 4.41 16 4 N -0.46 -10.67 2.02 -119.41 -0.24 -10.91 16 5 C -0.35 -8.47 6.66 -15.00 -0.10 -8.57 16 6 H 0.11 2.75 6.37 -52.49 -0.33 2.42 16 7 C 0.07 1.65 5.33 -17.46 -0.09 1.56 16 8 N -0.85 -21.54 13.96 55.50 0.77 -20.76 16 9 Si 0.87 18.72 24.84 -169.99 -4.22 14.49 16 10 H -0.27 -5.55 6.85 56.52 0.39 -5.16 16 11 H -0.28 -6.01 7.11 56.52 0.40 -5.61 16 12 H -0.25 -5.48 7.04 56.52 0.40 -5.08 16 13 C 0.57 13.17 7.54 -12.84 -0.10 13.08 16 14 O -0.59 -14.20 15.56 5.17 0.08 -14.12 16 15 C -0.23 -4.93 6.03 -104.75 -0.63 -5.57 16 16 C 0.13 2.64 10.09 -17.08 -0.17 2.47 16 17 N -0.32 -6.35 12.60 30.77 0.39 -5.96 16 18 N -0.26 -4.60 3.91 -10.49 -0.04 -4.64 16 19 C 0.06 0.84 11.25 -16.58 -0.19 0.65 16 20 C 0.01 0.11 11.07 -17.98 -0.20 -0.09 16 21 N -0.46 -6.93 10.44 -13.26 -0.14 -7.07 16 22 C 0.17 2.92 10.98 -17.02 -0.19 2.73 16 23 C 0.07 1.32 6.77 -84.04 -0.57 0.75 16 24 H 0.21 2.90 7.80 -54.08 -0.42 2.48 16 25 H 0.09 1.91 4.07 -51.93 -0.21 1.69 16 26 H 0.09 1.88 7.67 -51.93 -0.40 1.48 16 27 H 0.28 6.63 8.31 -40.82 -0.34 6.29 16 28 H 0.24 5.26 5.00 -52.49 -0.26 5.00 16 29 H 0.17 1.61 8.06 -52.49 -0.42 1.19 16 30 H 0.18 1.38 8.06 -52.49 -0.42 0.95 16 31 H 0.19 3.17 7.24 -52.48 -0.38 2.79 16 LS Contribution 279.74 15.07 4.22 4.22 Total: -1.00 -29.07 279.74 -3.39 -32.47 By element: Atomic # 1 Polarization: 10.44 SS G_CDS: -2.01 Total: 8.44 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: -2.20 Total: 3.85 kcal Atomic # 7 Polarization: -50.08 SS G_CDS: 0.74 Total: -49.34 kcal Atomic # 8 Polarization: -14.20 SS G_CDS: 0.08 Total: -14.12 kcal Atomic # 14 Polarization: 18.72 SS G_CDS: -4.22 Total: 14.49 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -29.07 -3.39 -32.47 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000302358096.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 196.751 kcal (2) G-P(sol) polarization free energy of solvation -29.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 167.678 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.392 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.465 kcal (6) G-S(sol) free energy of system = (1) + (5) 164.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds