Wall clock time and date at job start Mon Mar 30 2020 01:03:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47364 * 2 1 4 4 H 1.09002 * 109.46927 * 304.99912 * 3 2 1 5 5 C 1.53001 * 109.47134 * 185.00004 * 3 2 1 6 6 O 1.42898 * 109.47248 * 304.99778 * 5 3 2 7 7 N 1.46503 * 109.47329 * 64.99739 * 3 2 1 8 8 C 1.38401 * 120.00367 * 204.72692 * 7 3 2 9 9 N 1.32750 * 119.43353 * 0.27283 * 8 7 3 10 10 C 1.31479 * 121.73703 * 179.97438 * 9 8 7 11 11 C 1.40791 * 120.39041 * 0.02562 * 10 9 8 12 12 C 1.41189 * 120.56444 * 180.02562 * 11 10 9 13 13 H 1.08002 * 120.00018 * 335.70331 * 12 11 10 14 14 C 1.39871 * 119.99868 * 155.70965 * 12 11 10 15 15 N 1.30902 * 120.00001 * 343.20603 * 14 12 11 16 16 Si 1.86796 * 119.99605 * 163.20943 * 14 12 11 17 17 H 1.48493 * 109.47494 * 359.97438 * 16 14 12 18 18 H 1.48504 * 109.47186 * 119.99962 * 16 14 12 19 19 H 1.48507 * 109.46809 * 239.99534 * 16 14 12 20 20 C 1.41286 * 118.86857 * 359.97438 * 11 10 9 21 21 C 1.36665 * 118.40207 * 359.75028 * 20 11 10 22 22 Cl 1.73602 * 120.26561 * 180.25926 * 21 20 11 23 23 H 1.08998 * 109.47460 * 60.00158 * 1 2 3 24 24 H 1.09005 * 109.47682 * 180.02562 * 1 2 3 25 25 H 1.08999 * 109.47096 * 299.99950 * 1 2 3 26 26 H 1.08996 * 109.46986 * 239.99537 * 2 1 3 27 27 H 1.09000 * 109.46729 * 119.99948 * 2 1 3 28 28 H 1.09004 * 109.46908 * 65.00320 * 5 3 2 29 29 H 1.09002 * 109.46554 * 184.99999 * 5 3 2 30 30 H 0.96691 * 114.00091 * 179.97438 * 6 5 3 31 31 H 0.97006 * 119.99169 * 25.00133 * 7 3 2 32 32 H 1.07994 * 119.80103 * 179.97438 * 10 9 8 33 33 H 0.97001 * 120.00102 * 180.02562 * 15 14 12 34 34 H 1.07994 * 120.79943 * 180.02562 * 20 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9814 -0.8418 5 6 3.5649 1.4442 -0.1257 6 8 4.1293 0.6403 0.9121 7 7 1.6524 2.0975 1.2518 8 6 1.5278 3.4750 1.3023 9 7 1.7567 4.1913 0.2084 10 6 1.6511 5.5018 0.2051 11 6 1.2877 6.1900 1.3784 12 6 1.1726 7.5972 1.3789 13 1 1.7142 8.1835 0.6515 14 6 0.3572 8.2318 2.3217 15 7 -0.5415 7.5433 2.9790 16 14 0.5507 10.0618 2.6427 17 1 1.6284 10.6049 1.7776 18 1 -0.7264 10.7556 2.3378 19 1 0.9041 10.2795 4.0686 20 6 1.0390 5.4483 2.5550 21 6 1.1573 4.0878 2.5029 22 17 0.8564 3.1286 3.9182 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3635 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8932 -0.5138 0.8900 28 1 3.8499 1.0376 -1.0961 29 1 3.9355 2.4654 -0.0366 30 1 5.0950 0.5955 0.8937 31 1 1.4871 1.5660 2.0463 32 1 1.8450 6.0537 -0.7027 33 1 -1.1072 7.9835 3.6325 34 1 0.7579 5.9442 3.4722 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000310041549.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:03:19 Heat of formation + Delta-G solvation = -39.921622 kcal Electronic energy + Delta-G solvation = -18527.057047 eV Core-core repulsion = 15484.927822 eV Total energy + Delta-G solvation = -3042.129225 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -38.91276 -37.37699 -35.53493 -35.13223 -33.93720 -31.97131 -30.50286 -29.20681 -27.79998 -24.89380 -23.19093 -22.21812 -21.18216 -19.86470 -17.43424 -17.38211 -16.49075 -15.85749 -15.14947 -14.55498 -14.28314 -14.14285 -13.86080 -13.41971 -13.09841 -12.89855 -12.32338 -12.12710 -11.94105 -11.74671 -11.41944 -11.23634 -11.10995 -10.94475 -10.78367 -10.67590 -10.53809 -10.31717 -9.81545 -9.70380 -9.48449 -8.81263 -8.26731 -8.12407 -6.90256 -6.66709 -4.29618 2.52300 2.80179 3.06152 3.10809 3.17184 3.23823 3.89917 4.17125 4.55528 4.65519 5.06891 5.33847 5.38618 5.54471 5.61896 5.77658 5.88795 6.01160 6.04633 6.13523 6.29313 6.30495 6.48469 6.57900 6.64907 6.96120 7.08727 7.18175 7.65910 7.70935 7.84128 8.15272 8.38971 8.47855 8.69596 8.74152 9.53777 10.14061 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.026829 B = 0.005295 C = 0.004942 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1043.389321 B = 5286.745792 C = 5664.926393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.125 4.125 3 C 0.173 3.827 4 H 0.092 0.908 5 C 0.063 3.937 6 O -0.569 6.569 7 N -0.725 5.725 8 C 0.295 3.705 9 N -0.507 5.507 10 C 0.015 3.985 11 C 0.036 3.964 12 C -0.453 4.453 13 H 0.082 0.918 14 C 0.073 3.927 15 N -0.800 5.800 16 Si 0.910 3.090 17 H -0.260 1.260 18 H -0.275 1.275 19 H -0.272 1.272 20 C -0.086 4.086 21 C -0.104 4.104 22 Cl -0.114 7.114 23 H 0.052 0.948 24 H 0.047 0.953 25 H 0.058 0.942 26 H 0.065 0.935 27 H 0.069 0.931 28 H 0.039 0.961 29 H 0.052 0.948 30 H 0.369 0.631 31 H 0.398 0.602 32 H 0.133 0.867 33 H 0.281 0.719 34 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.828 -8.484 -2.626 9.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.163 4.163 3 C 0.066 3.934 4 H 0.110 0.890 5 C -0.017 4.017 6 O -0.373 6.373 7 N -0.365 5.365 8 C 0.061 3.939 9 N -0.223 5.223 10 C -0.143 4.143 11 C 0.030 3.970 12 C -0.484 4.484 13 H 0.100 0.900 14 C -0.144 4.144 15 N -0.426 5.426 16 Si 0.734 3.266 17 H -0.184 1.184 18 H -0.200 1.200 19 H -0.198 1.198 20 C -0.113 4.113 21 C -0.137 4.137 22 Cl -0.086 7.086 23 H 0.071 0.929 24 H 0.067 0.933 25 H 0.077 0.923 26 H 0.084 0.916 27 H 0.088 0.912 28 H 0.057 0.943 29 H 0.070 0.930 30 H 0.214 0.786 31 H 0.234 0.766 32 H 0.151 0.849 33 H 0.092 0.908 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.233 -9.028 -3.126 10.086 hybrid contribution 0.238 1.197 1.245 1.743 sum 3.471 -7.832 -1.881 8.770 Atomic orbital electron populations 1.21748 0.95752 1.00743 1.02460 1.21680 0.95899 0.96360 1.02389 1.20670 0.90888 0.92428 0.89408 0.88991 1.22805 0.95953 0.94233 0.88698 1.86484 1.24355 1.72351 1.54106 1.43764 1.78935 1.02160 1.11619 1.17473 1.02672 0.85033 0.88694 1.66763 1.20005 1.09106 1.26396 1.22337 1.07096 0.87812 0.97089 1.18295 0.93675 0.94616 0.90397 1.19343 1.24040 0.91112 1.13894 0.89985 1.25889 0.93192 1.00910 0.94425 1.69801 1.14275 1.38458 1.20054 0.86233 0.79186 0.82021 0.79144 1.18382 1.20013 1.19760 1.21309 1.00322 0.89636 1.00074 1.20924 1.13712 0.92652 0.86390 1.98242 1.95250 1.72982 1.42164 0.92885 0.93344 0.92271 0.91639 0.91246 0.94332 0.92956 0.78603 0.76582 0.84920 0.90764 0.84343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.96 9.80 37.16 0.36 -1.59 16 2 C -0.13 -1.67 5.19 -26.74 -0.14 -1.81 16 3 C 0.17 2.76 2.36 -67.93 -0.16 2.60 16 4 H 0.09 1.59 7.52 -51.93 -0.39 1.20 16 5 C 0.06 0.92 6.86 37.16 0.25 1.18 16 6 O -0.57 -7.98 12.83 -35.23 -0.45 -8.44 16 7 N -0.73 -13.58 4.56 -53.83 -0.25 -13.82 16 8 C 0.30 6.57 7.46 -155.06 -1.16 5.41 16 9 N -0.51 -11.58 9.14 -11.75 -0.11 -11.68 16 10 C 0.02 0.36 10.97 -16.74 -0.18 0.18 16 11 C 0.04 0.91 5.59 -106.65 -0.60 0.32 16 12 C -0.45 -11.42 9.07 -37.85 -0.34 -11.76 16 13 H 0.08 1.96 7.90 -52.49 -0.41 1.55 16 14 C 0.07 1.76 5.18 -17.34 -0.09 1.68 16 15 N -0.80 -20.16 10.91 55.54 0.61 -19.55 16 16 Si 0.91 18.14 29.59 -169.99 -5.03 13.11 16 17 H -0.26 -5.11 7.11 56.52 0.40 -4.71 16 18 H -0.27 -5.43 7.11 56.52 0.40 -5.02 16 19 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 20 C -0.09 -2.18 8.52 -38.99 -0.33 -2.51 16 21 C -0.10 -2.43 6.32 -39.57 -0.25 -2.68 16 22 Cl -0.11 -2.30 27.56 -51.86 -1.43 -3.73 16 23 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 24 H 0.05 0.54 8.14 -51.93 -0.42 0.12 16 25 H 0.06 0.87 7.75 -51.93 -0.40 0.46 16 26 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 27 H 0.07 0.96 7.73 -51.93 -0.40 0.56 16 28 H 0.04 0.48 8.14 -51.93 -0.42 0.05 16 29 H 0.05 0.89 8.14 -51.93 -0.42 0.46 16 30 H 0.37 3.56 9.12 45.56 0.42 3.98 16 31 H 0.40 7.29 7.21 -40.82 -0.29 7.00 16 32 H 0.13 2.88 8.06 -52.49 -0.42 2.46 16 33 H 0.28 6.49 8.30 -40.82 -0.34 6.15 16 34 H 0.14 3.64 6.20 -52.49 -0.33 3.32 16 LS Contribution 303.72 15.07 4.58 4.58 Total: -1.00 -27.14 303.72 -8.20 -35.33 By element: Atomic # 1 Polarization: 16.68 SS G_CDS: -3.48 Total: 13.19 kcal Atomic # 6 Polarization: -6.36 SS G_CDS: -2.63 Total: -8.99 kcal Atomic # 7 Polarization: -45.31 SS G_CDS: 0.25 Total: -45.06 kcal Atomic # 8 Polarization: -7.98 SS G_CDS: -0.45 Total: -8.44 kcal Atomic # 14 Polarization: 18.14 SS G_CDS: -5.03 Total: 13.11 kcal Atomic # 17 Polarization: -2.30 SS G_CDS: -1.43 Total: -3.73 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -27.14 -8.20 -35.33 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000310041549.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.588 kcal (2) G-P(sol) polarization free energy of solvation -27.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.725 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.196 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds