Wall clock time and date at job start Mon Mar 30 2020 00:46:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46504 * 109.46675 * 160.65229 * 3 2 1 5 5 C 1.36920 * 119.99800 * 267.01241 * 4 3 2 6 6 H 1.07999 * 119.99935 * 195.87244 * 5 4 3 7 7 C 1.39007 * 119.99882 * 15.59626 * 5 4 3 8 8 N 1.31386 * 120.00249 * 28.20305 * 7 5 4 9 9 Si 1.86802 * 119.99790 * 208.20185 * 7 5 4 10 10 H 1.48497 * 109.47007 * 60.00354 * 9 7 5 11 11 H 1.48503 * 109.46778 * 180.02562 * 9 7 5 12 12 H 1.48500 * 109.47140 * 299.99927 * 9 7 5 13 13 C 1.34777 * 120.00385 * 87.01799 * 4 3 2 14 14 O 1.21617 * 120.00308 * 173.52483 * 13 4 3 15 15 C 1.47488 * 119.99524 * 353.53092 * 13 4 3 16 16 C 1.36675 * 125.92452 * 174.51000 * 15 13 4 17 17 N 1.36208 * 107.08200 * 179.87300 * 16 15 13 18 18 C 1.36679 * 132.28480 * 180.09818 * 17 16 15 19 19 C 1.34852 * 120.63609 * 180.35285 * 18 17 16 20 20 C 1.40565 * 120.34311 * 359.95642 * 19 18 17 21 21 C 1.35900 * 119.72764 * 0.02562 * 20 19 18 22 22 C 1.37271 * 107.34601 * 0.38127 * 17 16 15 23 23 N 1.32248 * 108.39658 * 359.75646 * 22 17 16 24 24 H 1.08996 * 109.47206 * 40.65026 * 3 2 1 25 25 H 1.09004 * 109.46987 * 280.64961 * 3 2 1 26 26 H 0.96993 * 120.00486 * 179.97438 * 8 7 5 27 27 H 1.07999 * 126.46147 * 0.02562 * 16 15 13 28 28 H 1.07999 * 119.67745 * 0.35343 * 18 17 16 29 29 H 1.08008 * 119.82703 * 179.97438 * 19 18 17 30 30 H 1.07995 * 120.13324 * 180.02562 * 20 19 18 31 31 H 1.08006 * 120.32309 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0956 1.3042 -0.4576 5 6 3.3819 1.5015 -1.7819 6 1 3.9729 2.3529 -2.0856 7 6 2.9168 0.6028 -2.7350 8 7 1.8115 -0.0731 -2.5165 9 14 3.8632 0.3562 -4.3265 10 1 5.2336 -0.1255 -4.0179 11 1 3.1632 -0.6472 -5.1682 12 1 3.9448 1.6455 -5.0588 13 6 3.2625 2.3090 0.4249 14 8 3.7771 3.3519 0.0689 15 6 2.8212 2.1438 1.8225 16 6 3.0245 3.0354 2.8383 17 7 2.4601 2.5022 3.9574 18 6 2.3636 2.9547 5.2435 19 6 1.7460 2.2158 6.1875 20 6 1.1904 0.9667 5.8606 21 6 1.2778 0.5030 4.5861 22 6 1.9275 1.2864 3.6077 23 7 2.1535 1.0865 2.3201 24 1 2.9717 -0.7788 -0.6694 25 1 2.9714 -0.1891 1.0100 26 1 1.4868 -0.6999 -3.1816 27 1 3.5341 3.9849 2.7665 28 1 2.7861 3.9133 5.5063 29 1 1.6776 2.5859 7.1999 30 1 0.6962 0.3779 6.6191 31 1 0.8539 -0.4553 4.3242 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000337236737.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:51 Heat of formation + Delta-G solvation = 111.232304 kcal Electronic energy + Delta-G solvation = -19837.819694 eV Core-core repulsion = 16701.137502 eV Total energy + Delta-G solvation = -3136.682193 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -42.56677 -38.68794 -36.91772 -35.55251 -34.05871 -33.56189 -31.86167 -30.16884 -28.58109 -27.26392 -25.53053 -23.69127 -22.48058 -22.16192 -19.21765 -17.82119 -17.73568 -16.70913 -16.35839 -16.14848 -15.59809 -15.14220 -14.58782 -14.45645 -14.21732 -13.75967 -13.29717 -12.83767 -12.75415 -12.36672 -11.99277 -11.74790 -11.57181 -11.36045 -11.11452 -11.07345 -10.98439 -10.46214 -10.33076 -10.26999 -9.64956 -9.19719 -8.76379 -8.58993 -8.03660 -7.72850 -6.54663 -3.92171 0.74187 1.36463 2.57306 2.68776 3.18692 3.23686 3.27290 3.54867 3.88854 4.17202 4.23259 4.35430 4.42207 4.50470 4.74757 4.81632 4.95175 5.06614 5.15932 5.52528 5.61446 5.66422 5.80041 5.85960 6.08393 6.16074 6.41236 6.51464 6.59916 6.83348 7.16808 7.45619 7.87383 8.04373 8.32607 8.99129 9.15224 9.21285 9.78784 10.49737 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.033644 B = 0.005605 C = 0.004965 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 832.045743 B = 4994.436813 C = 5638.617712 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.487 5.487 2 C 0.273 3.727 3 C 0.223 3.777 4 N -0.413 5.413 5 C -0.320 4.320 6 H 0.114 0.886 7 C 0.038 3.962 8 N -0.850 5.850 9 Si 0.925 3.075 10 H -0.269 1.269 11 H -0.284 1.284 12 H -0.271 1.271 13 C 0.514 3.486 14 O -0.578 6.578 15 C 0.043 3.957 16 C -0.044 4.044 17 N -0.365 5.365 18 C 0.056 3.944 19 C -0.149 4.149 20 C -0.114 4.114 21 C -0.070 4.070 22 C 0.215 3.785 23 N -0.465 5.465 24 H 0.108 0.892 25 H 0.107 0.893 26 H 0.276 0.724 27 H 0.191 0.809 28 H 0.161 0.839 29 H 0.146 0.854 30 H 0.138 0.862 31 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.452 -0.205 16.077 16.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.168 5.168 2 C -0.045 4.045 3 C 0.096 3.904 4 N -0.129 5.129 5 C -0.447 4.447 6 H 0.131 0.869 7 C -0.169 4.169 8 N -0.486 5.486 9 Si 0.750 3.250 10 H -0.195 1.195 11 H -0.209 1.209 12 H -0.196 1.196 13 C 0.302 3.698 14 O -0.462 6.462 15 C -0.090 4.090 16 C -0.178 4.178 17 N -0.037 5.037 18 C -0.065 4.065 19 C -0.170 4.170 20 C -0.137 4.137 21 C -0.090 4.090 22 C -0.029 4.029 23 N -0.187 5.187 24 H 0.126 0.874 25 H 0.125 0.875 26 H 0.087 0.913 27 H 0.208 0.792 28 H 0.178 0.822 29 H 0.164 0.836 30 H 0.156 0.844 31 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 0.719 -0.478 15.238 15.262 hybrid contribution 0.816 0.544 -0.356 1.043 sum 1.535 0.066 14.882 14.961 Atomic orbital electron populations 1.80782 1.13702 1.08594 1.13704 1.28706 0.94841 0.92347 0.88598 1.18894 0.82535 0.88075 1.00889 1.43516 1.53862 1.08065 1.07505 1.19728 1.32117 1.12691 0.80175 0.86869 1.25352 0.94660 0.97005 0.99927 1.69986 1.15971 1.25535 1.37075 0.86016 0.79879 0.78533 0.80531 1.19468 1.20942 1.19591 1.16651 0.86318 0.84238 0.82591 1.90633 1.49084 1.27824 1.78622 1.21233 1.00476 0.91484 0.95823 1.22556 1.08232 1.03182 0.83798 1.42773 1.36728 1.16500 1.07744 1.21597 1.02292 1.00759 0.81895 1.20723 1.01046 0.95738 0.99459 1.20940 1.00441 0.96161 0.96202 1.20324 0.98368 0.99857 0.90467 1.21131 1.02522 0.86445 0.92844 1.71177 1.18138 1.25138 1.04281 0.87385 0.87548 0.91288 0.79193 0.82207 0.83585 0.84373 0.83319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -12.79 18.54 42.15 0.78 -12.01 16 2 C 0.27 6.77 11.89 -20.76 -0.25 6.52 16 3 C 0.22 5.07 4.76 -6.83 -0.03 5.04 16 4 N -0.41 -10.49 2.59 -119.13 -0.31 -10.80 16 5 C -0.32 -8.54 9.32 -14.99 -0.14 -8.68 16 6 H 0.11 3.13 7.38 -52.49 -0.39 2.74 16 7 C 0.04 0.95 4.70 -17.46 -0.08 0.87 16 8 N -0.85 -22.25 9.71 55.50 0.54 -21.71 16 9 Si 0.92 19.64 29.64 -169.99 -5.04 14.60 16 10 H -0.27 -5.58 7.11 56.52 0.40 -5.17 16 11 H -0.28 -5.98 7.11 56.52 0.40 -5.57 16 12 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 13 C 0.51 12.85 7.58 -12.49 -0.09 12.75 16 14 O -0.58 -15.70 16.51 5.26 0.09 -15.61 16 15 C 0.04 0.91 6.54 -83.45 -0.55 0.37 16 16 C -0.04 -0.76 11.47 -16.17 -0.19 -0.95 16 17 N -0.36 -5.51 2.93 -62.34 -0.18 -5.69 16 18 C 0.06 0.59 10.93 -16.59 -0.18 0.41 16 19 C -0.15 -1.28 9.98 -39.91 -0.40 -1.68 16 20 C -0.11 -1.08 10.06 -39.54 -0.40 -1.48 16 21 C -0.07 -0.90 10.11 -39.31 -0.40 -1.30 16 22 C 0.21 3.60 7.79 -156.03 -1.22 2.39 16 23 N -0.46 -9.35 6.87 -9.35 -0.06 -9.41 16 24 H 0.11 2.41 6.70 -51.93 -0.35 2.06 16 25 H 0.11 2.17 5.78 -51.93 -0.30 1.87 16 26 H 0.28 6.92 8.31 -40.82 -0.34 6.58 16 27 H 0.19 2.88 8.06 -52.49 -0.42 2.45 16 28 H 0.16 1.14 8.06 -52.49 -0.42 0.71 16 29 H 0.15 0.74 8.06 -52.48 -0.42 0.31 16 30 H 0.14 0.88 8.06 -52.49 -0.42 0.45 16 31 H 0.15 1.72 8.06 -52.48 -0.42 1.30 16 LS Contribution 281.68 15.07 4.24 4.24 Total: -1.00 -33.68 281.68 -6.14 -39.82 By element: Atomic # 1 Polarization: 4.60 SS G_CDS: -2.28 Total: 2.31 kcal Atomic # 6 Polarization: 18.18 SS G_CDS: -3.92 Total: 14.26 kcal Atomic # 7 Polarization: -60.40 SS G_CDS: 0.77 Total: -59.63 kcal Atomic # 8 Polarization: -15.70 SS G_CDS: 0.09 Total: -15.61 kcal Atomic # 14 Polarization: 19.64 SS G_CDS: -5.04 Total: 14.60 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -33.68 -6.14 -39.82 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000337236737.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 151.053 kcal (2) G-P(sol) polarization free energy of solvation -33.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.143 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.821 kcal (6) G-S(sol) free energy of system = (1) + (5) 111.232 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds