Wall clock time and date at job start Mon Mar 30 2020 00:46:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46510 * 109.46577 * 164.34571 * 3 2 1 5 5 C 1.36922 * 119.99652 * 277.91375 * 4 3 2 6 6 H 1.08001 * 119.99470 * 251.82878 * 5 4 3 7 7 C 1.38989 * 120.00117 * 71.83425 * 5 4 3 8 8 N 1.31403 * 119.99815 * 63.69280 * 7 5 4 9 9 Si 1.86795 * 119.99719 * 243.69588 * 7 5 4 10 10 H 1.48497 * 109.47231 * 90.00190 * 9 7 5 11 11 H 1.48511 * 109.46749 * 209.99904 * 9 7 5 12 12 H 1.48495 * 109.47533 * 329.99846 * 9 7 5 13 13 C 1.34778 * 119.99956 * 97.91434 * 4 3 2 14 14 O 1.21639 * 119.99781 * 185.12192 * 13 4 3 15 15 C 1.47400 * 119.99928 * 5.12080 * 13 4 3 16 16 C 1.46515 * 120.17806 * 331.59882 * 15 13 4 17 17 C 1.35532 * 119.04461 * 179.97438 * 16 15 13 18 18 C 1.41238 * 119.43978 * 359.97438 * 17 16 15 19 19 C 1.37921 * 132.95379 * 180.02562 * 18 17 16 20 20 N 1.33458 * 107.65720 * 179.78041 * 19 18 17 21 21 C 1.30744 * 109.93411 * 0.37380 * 20 19 18 22 22 N 1.35944 * 109.20820 * 359.62213 * 21 20 19 23 23 C 1.36366 * 132.47078 * 180.22479 * 22 21 20 24 24 H 1.09001 * 109.47431 * 44.34675 * 3 2 1 25 25 H 1.08998 * 109.47042 * 284.34020 * 3 2 1 26 26 H 0.97001 * 119.99511 * 179.97438 * 8 7 5 27 27 H 1.07999 * 120.47582 * 0.02562 * 16 15 13 28 28 H 1.07995 * 120.27933 * 180.02562 * 17 16 15 29 29 H 1.07994 * 126.17184 * 0.02562 * 19 18 17 30 30 H 1.08004 * 125.39683 * 179.88915 * 21 20 19 31 31 H 1.07997 * 119.75151 * 0.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0956 1.3310 -0.3727 5 6 3.1697 1.6880 -1.6925 6 1 4.1319 1.7755 -2.1750 7 6 2.0065 1.9377 -2.4112 8 7 1.2267 2.9393 -2.0717 9 14 1.5519 0.8493 -3.8596 10 1 0.7191 -0.2847 -3.3845 11 1 0.7862 1.6431 -4.8541 12 1 2.7887 0.3242 -4.4918 13 6 3.4714 2.2033 0.5835 14 8 3.7874 3.3383 0.2810 15 6 3.4992 1.7820 1.9957 16 6 2.5942 0.7314 2.4688 17 6 2.6396 0.3614 3.7719 18 6 3.5552 0.9940 4.6416 19 6 3.8342 0.8430 5.9838 20 7 4.8063 1.7031 6.2944 21 6 5.1494 2.3893 5.2357 22 7 4.4002 1.9824 4.1768 23 6 4.3682 2.3680 2.8692 24 1 2.9717 -0.7341 -0.7183 25 1 2.9714 -0.2537 0.9956 26 1 0.4152 3.1138 -2.5735 27 1 1.9015 0.2580 1.7888 28 1 1.9818 -0.4111 4.1419 29 1 3.3555 0.1507 6.6604 30 1 5.9108 3.1548 5.2060 31 1 5.0363 3.1424 2.5223 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000339818411.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:46:11 Heat of formation + Delta-G solvation = 134.678530 kcal Electronic energy + Delta-G solvation = -19822.365662 eV Core-core repulsion = 16686.700174 eV Total energy + Delta-G solvation = -3135.665488 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.61641 -39.32955 -36.53069 -36.36597 -34.53267 -33.40435 -32.47278 -30.67148 -28.36625 -27.42739 -25.64795 -23.51824 -22.68867 -21.74096 -19.80766 -18.06765 -17.92471 -17.07484 -16.89322 -15.80117 -15.63709 -15.19435 -14.86829 -14.61976 -14.42355 -13.78159 -13.61670 -13.39190 -13.23258 -12.40500 -12.32877 -12.23391 -11.91957 -11.62415 -11.47720 -11.36196 -11.02435 -10.76618 -10.50651 -10.36293 -10.22975 -9.14374 -8.91057 -8.51102 -7.72582 -7.47862 -6.76765 -4.26135 0.87318 1.12155 2.61967 2.93853 3.03856 3.17714 3.18267 3.24137 3.25532 3.32013 3.98560 4.02764 4.31235 4.44071 4.57533 4.62944 4.74652 4.88385 4.92216 5.05110 5.21169 5.46765 5.58433 5.74756 5.87570 5.97324 6.06488 6.19962 6.52719 6.61894 7.18783 7.23749 7.86769 8.03968 8.24361 8.41798 8.93721 9.00947 9.80246 10.09195 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.034079 B = 0.005608 C = 0.005075 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 821.426740 B = 4991.594607 C = 5515.988286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.438 5.438 2 C 0.198 3.802 3 C 0.159 3.841 4 N -0.427 5.427 5 C -0.440 4.440 6 H 0.092 0.908 7 C 0.130 3.870 8 N -0.730 5.730 9 Si 0.831 3.169 10 H -0.270 1.270 11 H -0.284 1.284 12 H -0.256 1.256 13 C 0.530 3.470 14 O -0.525 6.525 15 C -0.130 4.130 16 C -0.120 4.120 17 C -0.087 4.087 18 C 0.009 3.991 19 C -0.030 4.030 20 N -0.458 5.458 21 C 0.142 3.858 22 N -0.371 5.371 23 C 0.099 3.901 24 H 0.115 0.885 25 H 0.122 0.878 26 H 0.272 0.728 27 H 0.155 0.845 28 H 0.148 0.852 29 H 0.178 0.822 30 H 0.212 0.788 31 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.647 -6.352 9.252 12.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.117 5.117 2 C -0.121 4.121 3 C 0.033 3.967 4 N -0.150 5.150 5 C -0.561 4.561 6 H 0.110 0.890 7 C -0.095 4.095 8 N -0.352 5.352 9 Si 0.652 3.348 10 H -0.195 1.195 11 H -0.210 1.210 12 H -0.180 1.180 13 C 0.317 3.683 14 O -0.403 6.403 15 C -0.137 4.137 16 C -0.140 4.140 17 C -0.107 4.107 18 C -0.101 4.101 19 C -0.183 4.183 20 N -0.171 5.171 21 C -0.133 4.133 22 N -0.042 5.042 23 C -0.023 4.023 24 H 0.132 0.868 25 H 0.139 0.861 26 H 0.083 0.917 27 H 0.172 0.828 28 H 0.166 0.834 29 H 0.195 0.805 30 H 0.228 0.772 31 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 3.436 -5.358 9.881 11.754 hybrid contribution -0.529 -0.515 -1.643 1.801 sum 2.907 -5.873 8.238 10.527 Atomic orbital electron populations 1.81059 1.13435 1.08371 1.08824 1.30131 0.96258 0.92944 0.92769 1.20300 0.80431 0.91881 1.04091 1.42789 1.58343 1.08316 1.05505 1.18264 0.93231 1.61708 0.82896 0.89042 1.25501 0.95890 0.91433 0.96719 1.70834 1.10717 1.16627 1.37024 0.87531 0.79674 0.83849 0.83738 1.19544 1.21026 1.17955 1.18503 0.81274 0.85854 0.82621 1.90709 1.49678 1.18139 1.81753 1.21279 0.97583 0.98078 0.96748 1.23007 0.99083 0.96079 0.95879 1.20445 0.97738 1.00588 0.91900 1.19754 0.98143 0.96228 0.95928 1.22475 1.00405 1.03652 0.91797 1.69909 1.12961 1.07208 1.27053 1.25091 1.02304 1.05386 0.80501 1.42977 1.26647 1.26355 1.08236 1.21733 1.00615 0.99613 0.80333 0.86756 0.86149 0.91739 0.82754 0.83438 0.80463 0.77189 0.80622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -9.22 18.54 42.15 0.78 -8.44 16 2 C 0.20 3.79 12.88 -20.76 -0.27 3.52 16 3 C 0.16 2.68 5.39 -6.82 -0.04 2.64 16 4 N -0.43 -9.31 2.52 -119.16 -0.30 -9.61 16 5 C -0.44 -10.93 8.19 -15.00 -0.12 -11.06 16 6 H 0.09 2.36 8.06 -52.49 -0.42 1.94 16 7 C 0.13 3.26 4.64 -17.46 -0.08 3.18 16 8 N -0.73 -19.55 13.96 55.50 0.77 -18.77 16 9 Si 0.83 18.23 29.69 -169.99 -5.05 13.19 16 10 H -0.27 -5.99 7.11 56.52 0.40 -5.59 16 11 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 12 H -0.26 -5.42 7.11 56.52 0.40 -5.02 16 13 C 0.53 11.67 7.42 -12.53 -0.09 11.58 16 14 O -0.53 -13.69 16.59 5.24 0.09 -13.61 16 15 C -0.13 -2.26 5.66 -103.48 -0.59 -2.84 16 16 C -0.12 -1.78 7.66 -37.21 -0.29 -2.07 16 17 C -0.09 -1.12 10.09 -39.41 -0.40 -1.51 16 18 C 0.01 0.12 6.78 -84.02 -0.57 -0.45 16 19 C -0.03 -0.40 12.00 -16.96 -0.20 -0.60 16 20 N -0.46 -6.53 11.19 -13.77 -0.15 -6.68 16 21 C 0.14 1.83 12.76 -89.34 -1.14 0.69 16 22 N -0.37 -5.29 2.94 -61.90 -0.18 -5.48 16 23 C 0.10 1.51 10.49 -16.18 -0.17 1.34 16 24 H 0.11 1.65 8.10 -51.93 -0.42 1.23 16 25 H 0.12 1.63 4.05 -51.99 -0.21 1.42 16 26 H 0.27 6.80 8.31 -40.82 -0.34 6.46 16 27 H 0.16 2.31 3.09 -52.49 -0.16 2.15 16 28 H 0.15 1.40 8.06 -52.49 -0.42 0.98 16 29 H 0.18 1.78 8.06 -52.49 -0.42 1.36 16 30 H 0.21 1.90 8.06 -52.48 -0.42 1.47 16 31 H 0.18 2.46 7.83 -52.49 -0.41 2.05 16 LS Contribution 284.33 15.07 4.28 4.28 Total: -1.00 -32.44 284.33 -5.74 -38.18 By element: Atomic # 1 Polarization: 4.55 SS G_CDS: -2.03 Total: 2.52 kcal Atomic # 6 Polarization: 8.37 SS G_CDS: -3.95 Total: 4.42 kcal Atomic # 7 Polarization: -49.90 SS G_CDS: 0.92 Total: -48.99 kcal Atomic # 8 Polarization: -13.69 SS G_CDS: 0.09 Total: -13.61 kcal Atomic # 14 Polarization: 18.23 SS G_CDS: -5.05 Total: 13.19 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -32.44 -5.74 -38.18 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000339818411.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 172.858 kcal (2) G-P(sol) polarization free energy of solvation -32.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 140.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.180 kcal (6) G-S(sol) free energy of system = (1) + (5) 134.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds