Wall clock time and date at job start Mon Mar 30 2020 01:15:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.08997 * 109.47750 * 2 1 4 4 C 1.53007 * 109.47056 * 239.99813 * 2 1 3 5 5 C 1.53003 * 109.47151 * 175.00300 * 4 2 1 6 6 O 1.42894 * 109.46987 * 180.02562 * 5 4 2 7 7 N 1.46499 * 109.47186 * 120.00258 * 2 1 3 8 8 C 1.38405 * 120.00044 * 275.00047 * 7 2 1 9 9 N 1.32746 * 119.43753 * 359.97438 * 8 7 2 10 10 C 1.31471 * 121.74113 * 179.97438 * 9 8 7 11 11 C 1.40791 * 120.38936 * 359.97438 * 10 9 8 12 12 C 1.41197 * 120.56556 * 180.02562 * 11 10 9 13 13 H 1.08004 * 119.99423 * 335.70496 * 12 11 10 14 14 C 1.39862 * 120.00267 * 155.70494 * 12 11 10 15 15 N 1.30907 * 119.99551 * 343.21271 * 14 12 11 16 16 Si 1.86794 * 120.00041 * 163.20966 * 14 12 11 17 17 H 1.48500 * 109.47339 * 90.00409 * 16 14 12 18 18 H 1.48503 * 109.47051 * 210.00137 * 16 14 12 19 19 H 1.48500 * 109.47123 * 329.99811 * 16 14 12 20 20 C 1.41288 * 118.87045 * 0.02562 * 11 10 9 21 21 C 1.36669 * 118.40009 * 359.74507 * 20 11 10 22 22 Cl 1.73591 * 120.26314 * 180.25996 * 21 20 11 23 23 H 1.08997 * 109.47750 * 179.97438 * 1 2 3 24 24 H 1.09007 * 109.47011 * 300.00251 * 1 2 3 25 25 H 1.09006 * 109.47047 * 59.99299 * 1 2 3 26 26 H 1.09001 * 109.46469 * 55.00670 * 4 2 1 27 27 H 1.08993 * 109.47324 * 295.00595 * 4 2 1 28 28 H 1.08994 * 109.47058 * 59.99896 * 5 4 2 29 29 H 1.08998 * 109.46567 * 300.00368 * 5 4 2 30 30 H 0.96700 * 113.99772 * 179.97438 * 6 5 4 31 31 H 0.97002 * 120.00061 * 94.98946 * 7 2 1 32 32 H 1.08001 * 119.80409 * 179.97438 * 10 9 8 33 33 H 0.97003 * 119.99487 * 179.97438 * 15 14 12 34 34 H 1.07998 * 120.79754 * 180.02562 * 20 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0400 -0.7213 -1.2493 5 6 3.5648 -0.6134 -1.3137 6 8 4.0410 -1.2866 -2.4807 7 7 2.0183 -0.6907 1.1961 8 6 2.1505 -0.0003 2.3884 9 7 1.8320 1.2876 2.4353 10 6 1.9396 1.9867 3.5435 11 6 2.4014 1.3794 4.7268 12 6 2.5179 2.1266 5.9191 13 1 2.6408 3.1987 5.8747 14 6 2.4742 1.4785 7.1577 15 7 2.0055 0.2591 7.2421 16 14 3.0845 2.3527 8.6915 17 1 1.9610 3.0937 9.3191 18 1 3.6164 1.3532 9.6524 19 1 4.1614 3.3062 8.3222 20 6 2.7464 0.0095 4.7007 21 6 2.6116 -0.6725 3.5241 22 17 3.0150 -2.3588 3.4391 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5140 -0.8900 26 1 1.6053 -0.2617 -2.1370 27 1 1.7515 -1.7715 -1.2057 28 1 3.9994 -1.0729 -0.4260 29 1 3.8531 0.4368 -1.3573 30 1 5.0018 -1.2583 -2.5865 31 1 2.2489 -1.6319 1.1526 32 1 1.6721 3.0331 3.5462 33 1 1.9755 -0.1906 8.1011 34 1 3.1036 -0.4877 5.5904 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000390249424.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:15:56 Heat of formation + Delta-G solvation = -41.656855 kcal Electronic energy + Delta-G solvation = -18289.702771 eV Core-core repulsion = 15247.498301 eV Total energy + Delta-G solvation = -3042.204470 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -38.91270 -37.39935 -35.84701 -35.57549 -33.96371 -31.59355 -30.53893 -28.95588 -28.34679 -24.96334 -23.10357 -22.25086 -21.23324 -20.04584 -17.49015 -17.37086 -16.81294 -15.85504 -15.29482 -14.72258 -14.35433 -14.29366 -13.88353 -13.35641 -13.28113 -12.79213 -12.33840 -12.07992 -11.78854 -11.76832 -11.47446 -11.40922 -11.16174 -11.05287 -10.91158 -10.74183 -10.60373 -10.36722 -9.92929 -9.86510 -9.52879 -8.85502 -8.30507 -8.15446 -6.94764 -6.70756 -4.33150 2.49117 2.78385 3.04077 3.07166 3.15707 3.18707 3.87621 4.12354 4.19908 4.54845 5.12587 5.18990 5.36716 5.50907 5.63249 5.74199 5.83441 5.88294 5.97590 6.11152 6.16286 6.29416 6.52102 6.60643 6.66923 6.92505 7.05990 7.14592 7.59253 7.62880 7.67058 8.09451 8.34027 8.40531 8.65943 8.70816 9.50916 10.11002 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.027908 B = 0.004879 C = 0.004573 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1003.049034 B = 5737.762805 C = 6121.786064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.168 3.832 3 H 0.083 0.917 4 C -0.125 4.125 5 C 0.076 3.924 6 O -0.580 6.580 7 N -0.737 5.737 8 C 0.292 3.708 9 N -0.501 5.501 10 C 0.015 3.985 11 C 0.038 3.962 12 C -0.453 4.453 13 H 0.082 0.918 14 C 0.073 3.927 15 N -0.799 5.799 16 Si 0.910 3.090 17 H -0.269 1.269 18 H -0.276 1.276 19 H -0.261 1.261 20 C -0.088 4.088 21 C -0.104 4.104 22 Cl -0.115 7.115 23 H 0.047 0.953 24 H 0.064 0.936 25 H 0.052 0.948 26 H 0.076 0.924 27 H 0.068 0.932 28 H 0.051 0.949 29 H 0.045 0.955 30 H 0.377 0.623 31 H 0.395 0.605 32 H 0.134 0.866 33 H 0.282 0.718 34 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.028 -1.936 -8.715 9.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.062 3.938 3 H 0.101 0.899 4 C -0.163 4.163 5 C -0.001 4.001 6 O -0.386 6.386 7 N -0.377 5.377 8 C 0.058 3.942 9 N -0.217 5.217 10 C -0.144 4.144 11 C 0.032 3.968 12 C -0.483 4.483 13 H 0.100 0.900 14 C -0.144 4.144 15 N -0.425 5.425 16 Si 0.734 3.266 17 H -0.195 1.195 18 H -0.201 1.201 19 H -0.184 1.184 20 C -0.115 4.115 21 C -0.136 4.136 22 Cl -0.088 7.088 23 H 0.066 0.934 24 H 0.083 0.917 25 H 0.071 0.929 26 H 0.095 0.905 27 H 0.087 0.913 28 H 0.069 0.931 29 H 0.063 0.937 30 H 0.223 0.777 31 H 0.231 0.769 32 H 0.151 0.849 33 H 0.093 0.907 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.002 -1.814 -9.460 9.684 hybrid contribution 1.157 -0.527 1.768 2.177 sum 2.159 -2.341 -7.692 8.325 Atomic orbital electron populations 1.22176 0.96487 1.01252 1.01854 1.20462 0.93186 0.97014 0.83135 0.89879 1.21830 0.94053 1.01900 0.98561 1.22208 0.95240 0.95673 0.87025 1.86433 1.26975 1.79049 1.46116 1.43928 1.75954 1.11404 1.06447 1.17420 1.02586 0.88888 0.85275 1.66763 1.20121 1.04653 1.30143 1.22360 1.04703 0.98796 0.88539 1.18298 0.92662 0.91717 0.94096 1.19320 1.44140 0.95363 0.89522 0.89982 1.25893 0.92562 0.94858 1.01092 1.69796 1.32458 1.12612 1.27593 0.86278 0.80032 0.79953 0.80315 1.19469 1.20122 1.18441 1.21308 0.99819 0.95153 0.95237 1.20940 1.12734 0.83612 0.96350 1.98241 1.93236 1.18816 1.98472 0.93366 0.91652 0.92927 0.90506 0.91320 0.93075 0.93664 0.77711 0.76913 0.84876 0.90676 0.84334 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.34 9.50 37.15 0.35 -1.98 16 2 C 0.17 2.58 2.57 -67.93 -0.17 2.41 16 3 H 0.08 1.40 7.51 -51.93 -0.39 1.01 16 4 C -0.13 -1.62 5.12 -26.73 -0.14 -1.76 16 5 C 0.08 0.97 6.93 37.16 0.26 1.23 16 6 O -0.58 -7.02 13.66 -35.23 -0.48 -7.50 16 7 N -0.74 -13.10 4.61 -53.83 -0.25 -13.35 16 8 C 0.29 6.31 7.46 -155.05 -1.16 5.16 16 9 N -0.50 -11.30 9.14 -11.75 -0.11 -11.41 16 10 C 0.01 0.35 10.97 -16.74 -0.18 0.16 16 11 C 0.04 0.95 5.59 -106.65 -0.60 0.36 16 12 C -0.45 -11.28 9.07 -37.85 -0.34 -11.62 16 13 H 0.08 1.94 7.90 -52.48 -0.41 1.52 16 14 C 0.07 1.75 5.18 -17.34 -0.09 1.66 16 15 N -0.80 -19.89 10.91 55.54 0.61 -19.28 16 16 Si 0.91 17.93 29.59 -169.99 -5.03 12.90 16 17 H -0.27 -5.26 7.11 56.52 0.40 -4.86 16 18 H -0.28 -5.37 7.11 56.52 0.40 -4.97 16 19 H -0.26 -5.09 7.11 56.52 0.40 -4.68 16 20 C -0.09 -2.18 8.52 -38.99 -0.33 -2.52 16 21 C -0.10 -2.35 6.32 -39.57 -0.25 -2.60 16 22 Cl -0.12 -2.24 27.56 -51.86 -1.43 -3.67 16 23 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.06 1.13 8.14 -51.92 -0.42 0.71 16 25 H 0.05 0.66 8.14 -51.93 -0.42 0.23 16 26 H 0.08 0.92 8.14 -51.93 -0.42 0.50 16 27 H 0.07 0.89 8.14 -51.93 -0.42 0.47 16 28 H 0.05 0.69 7.75 -51.93 -0.40 0.29 16 29 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 30 H 0.38 2.87 9.12 45.56 0.42 3.29 16 31 H 0.40 6.67 7.21 -40.82 -0.29 6.37 16 32 H 0.13 2.87 8.06 -52.49 -0.42 2.45 16 33 H 0.28 6.45 8.30 -40.82 -0.34 6.11 16 34 H 0.14 3.58 6.20 -52.49 -0.33 3.25 16 LS Contribution 304.93 15.07 4.60 4.60 Total: -1.00 -26.89 304.93 -8.25 -35.15 By element: Atomic # 1 Polarization: 15.59 SS G_CDS: -3.51 Total: 12.08 kcal Atomic # 6 Polarization: -6.86 SS G_CDS: -2.65 Total: -9.51 kcal Atomic # 7 Polarization: -44.30 SS G_CDS: 0.25 Total: -44.05 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -0.48 Total: -7.50 kcal Atomic # 14 Polarization: 17.93 SS G_CDS: -5.03 Total: 12.90 kcal Atomic # 17 Polarization: -2.24 SS G_CDS: -1.43 Total: -3.67 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -26.89 -8.25 -35.15 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000390249424.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.510 kcal (2) G-P(sol) polarization free energy of solvation -26.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.147 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds