Wall clock time and date at job start Mon Mar 30 2020 00:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53001 * 109.46886 * 2 1 4 4 C 1.50696 * 109.47264 * 239.99706 * 2 1 3 5 5 H 1.07999 * 119.99822 * 239.99677 * 4 2 1 6 6 C 1.37876 * 120.00339 * 59.99823 * 4 2 1 7 7 N 1.31514 * 119.99769 * 0.02562 * 6 4 2 8 8 Si 1.86800 * 120.00300 * 180.02562 * 6 4 2 9 9 H 1.48498 * 109.47118 * 89.99790 * 8 6 4 10 10 H 1.48499 * 109.47134 * 210.00310 * 8 6 4 11 11 H 1.48507 * 109.46904 * 330.00133 * 8 6 4 12 12 C 1.53002 * 109.46911 * 119.99531 * 2 1 3 13 13 N 1.46506 * 109.47035 * 300.00027 * 12 2 1 14 14 C 1.34777 * 119.99873 * 179.97438 * 13 12 2 15 15 O 1.21704 * 120.00041 * 0.02562 * 14 13 12 16 16 C 1.46666 * 119.99958 * 180.02562 * 14 13 12 17 17 C 1.37896 * 126.21972 * 179.69097 * 16 14 13 18 18 C 1.39895 * 107.09198 * 179.88599 * 17 16 14 19 19 Cl 1.73599 * 126.07553 * 180.15053 * 18 17 16 20 20 C 1.35513 * 107.85201 * 0.38176 * 18 17 16 21 21 N 1.35638 * 108.85164 * 359.76232 * 20 18 17 22 22 H 0.97000 * 125.67157 * 180.02562 * 21 20 18 23 23 H 1.09002 * 109.47398 * 300.00496 * 1 2 3 24 24 H 1.09001 * 109.47194 * 60.00677 * 1 2 3 25 25 H 1.09000 * 109.46968 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.47086 * 179.97438 * 3 2 1 27 27 H 1.09001 * 109.46652 * 299.99655 * 3 2 1 28 28 H 1.08992 * 109.47514 * 59.99566 * 3 2 1 29 29 H 0.97000 * 120.00540 * 179.97438 * 7 6 4 30 30 H 1.09004 * 109.46930 * 180.02562 * 12 2 1 31 31 H 1.09000 * 109.47312 * 60.00201 * 12 2 1 32 32 H 0.96999 * 120.00080 * 0.02562 * 13 12 2 33 33 H 1.07994 * 126.45486 * 0.02562 * 17 16 14 34 34 H 1.08003 * 125.57822 * 179.78496 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0324 -0.7104 -1.2304 5 1 2.6533 -1.5885 -1.1312 6 6 1.6993 -0.2395 -2.4827 7 7 0.9436 0.8300 -2.6035 8 14 2.3214 -1.1206 -4.0078 9 1 1.3429 -2.1620 -4.4117 10 1 2.4867 -0.1417 -5.1122 11 1 3.6294 -1.7586 -3.7120 12 6 2.0400 -0.7212 1.2493 13 7 1.5516 -0.0304 2.4455 14 6 1.8767 -0.4911 3.6696 15 8 2.5764 -1.4806 3.7814 16 6 1.3873 0.2001 4.8671 17 6 1.6347 -0.1612 6.1747 18 6 0.9819 0.7703 6.9891 19 17 0.9726 0.7812 8.7250 20 6 0.3538 1.6596 6.1822 21 7 0.5927 1.3236 4.8900 22 1 0.2593 1.7968 4.1116 23 1 -0.3634 0.5139 0.8899 24 1 -0.3634 0.5137 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 3.1300 1.4426 0.0005 27 1 1.6766 1.9563 -0.8900 28 1 1.6766 1.9564 0.8899 29 1 0.7095 1.1616 -3.4845 30 1 3.1300 -0.7208 1.2496 31 1 1.6767 -1.7488 1.2494 32 1 0.9936 0.7580 2.3564 33 1 2.2236 -1.0031 6.5074 34 1 -0.2397 2.4988 6.5137 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457991590.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:58:33 Heat of formation + Delta-G solvation = -9.316144 kcal Electronic energy + Delta-G solvation = -18223.038640 eV Core-core repulsion = 15182.236569 eV Total energy + Delta-G solvation = -3040.802072 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.43706 -38.91887 -36.50876 -36.42916 -33.47856 -31.27767 -30.84363 -29.33080 -25.84374 -25.79927 -25.08473 -22.54925 -20.75500 -20.23423 -19.19432 -18.62643 -16.19800 -15.67175 -15.28615 -15.18963 -14.70018 -14.47218 -14.18004 -13.63050 -13.24485 -12.99494 -12.97829 -12.83103 -12.30387 -11.95859 -11.49461 -11.29281 -10.96001 -10.93976 -10.75781 -10.49536 -10.28704 -9.89657 -9.74793 -9.40629 -9.02496 -8.89144 -8.67422 -8.45798 -8.29829 -6.09675 -4.19854 1.37870 2.06485 2.34357 3.01271 3.24243 3.31489 3.35131 3.52159 3.58860 4.34661 4.76755 4.93716 5.08140 5.17586 5.51772 5.78205 6.08343 6.21995 6.31043 6.37339 6.51271 6.64381 6.67706 6.81375 6.84523 6.90859 7.06766 7.24210 7.44645 7.61382 7.85699 7.90617 8.04522 8.28897 8.47370 8.80770 9.46567 10.91924 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.053510 B = 0.003533 C = 0.003391 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 523.143752 B = 7923.992902 C = 8256.076455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C 0.056 3.944 3 C -0.131 4.131 4 C -0.507 4.507 5 H 0.059 0.941 6 C 0.067 3.933 7 N -0.887 5.887 8 Si 0.894 3.106 9 H -0.281 1.281 10 H -0.287 1.287 11 H -0.273 1.273 12 C 0.131 3.869 13 N -0.714 5.714 14 C 0.577 3.423 15 O -0.534 6.534 16 C -0.027 4.027 17 C -0.103 4.103 18 C -0.127 4.127 19 Cl -0.053 7.053 20 C 0.034 3.966 21 N -0.529 5.529 22 H 0.425 0.575 23 H 0.002 0.998 24 H 0.087 0.913 25 H 0.028 0.972 26 H 0.028 0.972 27 H 0.087 0.913 28 H 0.002 0.998 29 H 0.260 0.740 30 H 0.059 0.941 31 H 0.059 0.941 32 H 0.392 0.608 33 H 0.156 0.844 34 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.233 4.562 15.021 16.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.055 3.945 3 C -0.188 4.188 4 C -0.546 4.546 5 H 0.077 0.923 6 C -0.135 4.135 7 N -0.525 5.525 8 Si 0.722 3.278 9 H -0.207 1.207 10 H -0.212 1.212 11 H -0.198 1.198 12 C 0.009 3.991 13 N -0.364 5.364 14 C 0.362 3.638 15 O -0.411 6.411 16 C -0.141 4.141 17 C -0.130 4.130 18 C -0.160 4.160 19 Cl -0.025 7.025 20 C -0.103 4.103 21 N -0.126 5.126 22 H 0.264 0.736 23 H 0.021 0.979 24 H 0.105 0.895 25 H 0.047 0.953 26 H 0.047 0.953 27 H 0.105 0.895 28 H 0.021 0.979 29 H 0.071 0.929 30 H 0.077 0.923 31 H 0.077 0.923 32 H 0.226 0.774 33 H 0.174 0.826 34 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -2.830 4.000 14.883 15.668 hybrid contribution -0.197 0.258 -1.032 1.082 sum -3.027 4.258 13.851 14.803 Atomic orbital electron populations 1.21843 0.97766 0.99308 0.99926 1.18370 0.92771 0.92765 0.90590 1.21840 0.98763 0.98306 0.99929 1.20973 1.31625 1.12195 0.89790 0.92293 1.24879 0.94792 0.94886 0.98917 1.69789 1.36677 1.22708 1.23338 0.86548 0.79379 0.79388 0.82448 1.20662 1.21243 1.19828 1.21812 0.98442 0.95920 0.82892 1.46226 1.52493 1.31574 1.06090 1.17017 0.80835 0.84000 0.81910 1.90835 1.38340 1.25718 1.86233 1.20683 1.04510 0.93176 0.95730 1.21140 1.02113 1.00410 0.89325 1.19933 1.09327 1.01772 0.84972 1.98318 1.98077 1.98432 1.07626 1.21693 1.04475 1.01855 0.82311 1.41987 1.39532 1.23176 1.07941 0.73613 0.97864 0.89464 0.95268 0.95262 0.89460 0.97862 0.92943 0.92266 0.92268 0.77366 0.82613 0.80369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.81 8.08 37.16 0.30 -2.51 16 2 C 0.06 1.24 0.50 -155.66 -0.08 1.16 16 3 C -0.13 -2.81 8.08 37.16 0.30 -2.51 16 4 C -0.51 -12.91 8.01 -34.44 -0.28 -13.19 16 5 H 0.06 1.52 7.74 -52.49 -0.41 1.11 16 6 C 0.07 1.71 5.15 -17.82 -0.09 1.62 16 7 N -0.89 -22.96 9.35 55.43 0.52 -22.44 16 8 Si 0.89 20.29 29.54 -169.99 -5.02 15.27 16 9 H -0.28 -6.38 7.11 56.52 0.40 -5.97 16 10 H -0.29 -6.49 7.11 56.52 0.40 -6.09 16 11 H -0.27 -6.22 7.11 56.52 0.40 -5.82 16 12 C 0.13 2.68 4.50 -4.04 -0.02 2.66 16 13 N -0.71 -12.04 4.95 -61.61 -0.31 -12.35 16 14 C 0.58 9.94 7.79 -12.86 -0.10 9.84 16 15 O -0.53 -11.11 16.88 5.19 0.09 -11.02 16 16 C -0.03 -0.37 7.05 -81.99 -0.58 -0.95 16 17 C -0.10 -1.39 10.65 -39.09 -0.42 -1.81 16 18 C -0.13 -1.45 6.66 -39.93 -0.27 -1.71 16 19 Cl -0.05 -0.55 29.30 -51.86 -1.52 -2.07 16 20 C 0.03 0.32 11.87 -16.84 -0.20 0.12 16 21 N -0.53 -5.38 6.00 -9.35 -0.06 -5.44 16 22 H 0.43 3.28 8.19 -40.82 -0.33 2.94 16 23 H 0.00 0.04 6.86 -51.93 -0.36 -0.31 16 24 H 0.09 2.09 6.07 -51.93 -0.32 1.77 16 25 H 0.03 0.63 8.14 -51.93 -0.42 0.20 16 26 H 0.03 0.63 8.14 -51.93 -0.42 0.20 16 27 H 0.09 2.09 6.07 -51.93 -0.32 1.77 16 28 H 0.00 0.04 6.86 -51.93 -0.36 -0.31 16 29 H 0.26 6.53 8.31 -40.82 -0.34 6.19 16 30 H 0.06 1.27 8.14 -51.93 -0.42 0.85 16 31 H 0.06 1.27 8.14 -51.93 -0.42 0.85 16 32 H 0.39 5.71 5.29 -40.82 -0.22 5.50 16 33 H 0.16 2.09 8.06 -52.49 -0.42 1.66 16 34 H 0.18 1.04 8.06 -52.48 -0.42 0.62 16 LS Contribution 299.77 15.07 4.52 4.52 Total: -1.00 -28.48 299.77 -7.17 -35.65 By element: Atomic # 1 Polarization: 9.13 SS G_CDS: -3.97 Total: 5.16 kcal Atomic # 6 Polarization: -5.86 SS G_CDS: -1.42 Total: -7.29 kcal Atomic # 7 Polarization: -40.38 SS G_CDS: 0.16 Total: -40.22 kcal Atomic # 8 Polarization: -11.11 SS G_CDS: 0.09 Total: -11.02 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -5.02 Total: 15.27 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.52 Total: -2.07 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -28.48 -7.17 -35.65 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457991590.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.334 kcal (2) G-P(sol) polarization free energy of solvation -28.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.142 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.174 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds