Wall clock time and date at job start Mon Mar 30 2020 01:04:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 N 1.46505 * 109.46826 * 148.07624 * 3 2 1 5 5 C 1.36877 * 119.99816 * 263.85306 * 4 3 2 6 6 H 1.07996 * 120.00108 * 205.67077 * 5 4 3 7 7 C 1.39044 * 119.99780 * 25.67064 * 5 4 3 8 8 N 1.31365 * 120.00192 * 14.97969 * 7 5 4 9 9 Si 1.86804 * 119.99766 * 194.97330 * 7 5 4 10 10 H 1.48501 * 109.46780 * 90.00219 * 9 7 5 11 11 H 1.48495 * 109.46936 * 210.00140 * 9 7 5 12 12 H 1.48504 * 109.47150 * 330.00312 * 9 7 5 13 13 C 1.34770 * 120.00334 * 83.85345 * 4 3 2 14 14 O 1.21636 * 119.99773 * 5.08848 * 13 4 3 15 15 C 1.47397 * 120.00275 * 184.81407 * 13 4 3 16 16 C 1.39339 * 120.25275 * 39.02598 * 15 13 4 17 17 C 1.38418 * 120.26737 * 179.72909 * 16 15 13 18 18 C 1.37660 * 120.80860 * 0.57559 * 17 16 15 19 19 C 1.40106 * 120.16263 * 359.69783 * 18 17 16 20 20 N 1.35395 * 133.02716 * 180.02562 * 19 18 17 21 21 N 1.28662 * 110.10644 * 179.97438 * 20 19 18 22 22 N 1.40251 * 109.42566 * 0.02562 * 21 20 19 23 23 H 0.97001 * 126.66267 * 180.02562 * 22 21 20 24 24 C 1.36970 * 106.67262 * 359.97438 * 22 21 20 25 25 H 4.40646 * 5.51511 * 180.02562 * 4 1 2 26 26 H 1.09000 * 109.47459 * 28.07735 * 3 2 1 27 27 H 1.08996 * 109.47237 * 268.07240 * 3 2 1 28 28 H 0.97000 * 120.00323 * 180.02562 * 8 7 5 29 29 H 1.07994 * 119.85895 * 0.02562 * 16 15 13 30 30 H 1.07995 * 119.59283 * 180.27467 * 17 16 15 31 31 H 1.07998 * 119.91710 * 179.68447 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1337 1.1732 -0.7304 5 6 3.4816 1.0619 -2.0496 6 1 4.1990 1.7458 -2.4784 7 6 2.9111 0.0683 -2.8374 8 7 1.8408 -0.5681 -2.4191 9 14 3.6668 -0.3615 -4.4908 10 1 4.6788 -1.4330 -4.3090 11 1 2.6037 -0.8359 -5.4126 12 1 4.3188 0.8429 -5.0652 13 6 3.2400 2.3615 -0.1035 14 8 3.0199 2.4412 1.0901 15 6 3.6288 3.5634 -0.8631 16 6 3.1416 3.7670 -2.1526 17 6 3.5021 4.8983 -2.8641 18 6 4.3533 5.8327 -2.3187 19 6 4.8630 5.6513 -1.0263 20 7 5.6973 6.3834 -0.2511 21 7 5.8757 5.7990 0.8812 22 7 5.1401 4.6053 0.9111 23 1 5.0943 3.9713 1.6438 24 6 4.4978 4.5092 -0.2949 25 1 -1.0503 -0.0002 0.0003 26 1 3.0098 -0.9059 -0.4837 27 1 3.0093 0.0354 1.0270 28 1 1.4430 -1.2615 -2.9685 29 1 2.4764 3.0415 -2.5968 30 1 3.1146 5.0473 -3.8610 31 1 4.6290 6.7076 -2.8886 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490964099.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:04:39 Heat of formation + Delta-G solvation = 144.264819 kcal Electronic energy + Delta-G solvation = -20028.283886 eV Core-core repulsion = 16893.034090 eV Total energy + Delta-G solvation = -3135.249795 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -41.72846 -39.01809 -36.79140 -35.34374 -33.12176 -32.09268 -31.65169 -30.02872 -29.67971 -26.61748 -25.16767 -23.73292 -22.54151 -22.01711 -19.80981 -18.44146 -17.60896 -17.25686 -16.53653 -15.96704 -15.28252 -15.08768 -14.63208 -14.46212 -14.34539 -13.78651 -13.15315 -12.53354 -12.19714 -12.13025 -11.84602 -11.72661 -11.58294 -11.56551 -11.21048 -10.88812 -10.82435 -10.77007 -10.56053 -9.52708 -9.46288 -8.87573 -8.76547 -8.50129 -8.09583 -7.95908 -6.56802 -4.23554 0.69645 1.63506 2.40857 2.78762 2.98053 3.08955 3.10277 3.49830 3.73332 3.96613 4.11492 4.17320 4.42582 4.67769 4.81248 5.01772 5.26710 5.34539 5.49904 5.56938 5.67243 5.96742 6.18282 6.29586 6.51219 6.64347 6.67161 6.73135 6.99940 7.04617 7.17419 7.28951 7.44358 8.07972 8.24586 8.77896 8.88654 9.13129 9.54988 10.39081 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.019248 B = 0.007473 C = 0.006036 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1454.336072 B = 3745.776188 C = 4638.083430 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.265 4.265 2 C -0.102 4.102 3 C 0.242 3.758 4 N -0.417 5.417 5 C -0.352 4.352 6 H 0.105 0.895 7 C 0.043 3.957 8 N -0.843 5.843 9 Si 0.919 3.081 10 H -0.275 1.275 11 H -0.282 1.282 12 H -0.265 1.265 13 C 0.493 3.507 14 O -0.606 6.606 15 C -0.097 4.097 16 C -0.018 4.018 17 C -0.141 4.141 18 C -0.036 4.036 19 C -0.034 4.034 20 N -0.222 5.222 21 N -0.020 5.020 22 N -0.483 5.483 23 H 0.452 0.548 24 C 0.130 3.870 25 H 0.198 0.802 26 H 0.101 0.899 27 H 0.070 0.930 28 H 0.274 0.726 29 H 0.161 0.839 30 H 0.137 0.863 31 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.912 3.819 -2.454 4.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.284 4.284 2 C -0.103 4.103 3 C 0.120 3.880 4 N -0.132 5.132 5 C -0.479 4.479 6 H 0.122 0.878 7 C -0.165 4.165 8 N -0.477 5.477 9 Si 0.745 3.255 10 H -0.201 1.201 11 H -0.207 1.207 12 H -0.189 1.189 13 C 0.283 3.717 14 O -0.494 6.494 15 C -0.104 4.104 16 C -0.040 4.040 17 C -0.163 4.163 18 C -0.059 4.059 19 C -0.158 4.158 20 N -0.102 5.102 21 N -0.002 5.002 22 N -0.206 5.206 23 H 0.300 0.700 24 C 0.006 3.994 25 H 0.215 0.785 26 H 0.119 0.881 27 H 0.088 0.912 28 H 0.085 0.915 29 H 0.178 0.822 30 H 0.155 0.845 31 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.670 4.606 -1.203 5.458 hybrid contribution -0.684 -1.490 -1.067 1.956 sum 1.985 3.116 -2.269 4.336 Atomic orbital electron populations 1.24177 0.95294 1.02504 1.06378 1.22896 0.94118 0.98159 0.95160 1.18026 0.84543 0.90197 0.95247 1.43505 1.53798 1.05410 1.10524 1.19737 1.24337 1.18998 0.84840 0.87796 1.25421 0.94450 0.96955 0.99708 1.70009 1.16480 1.22869 1.38341 0.86040 0.78854 0.79506 0.81146 1.20086 1.20705 1.18940 1.17884 0.83856 0.82948 0.87004 1.90648 1.58082 1.85554 1.15166 1.19013 1.00252 0.95492 0.95659 1.21840 0.95438 0.95773 0.90995 1.21002 0.99893 0.94402 1.00963 1.20444 0.95211 0.99181 0.91049 1.19843 1.03775 0.94247 0.97971 1.74753 1.13089 1.23437 0.98922 1.81452 1.12355 0.92292 1.14092 1.47632 1.37671 1.20673 1.14658 0.70047 1.19190 0.96163 0.96959 0.87105 0.78517 0.88071 0.91224 0.91478 0.82153 0.84518 0.84813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.26 -5.67 19.25 29.55 0.57 -5.10 16 2 C -0.10 -2.35 11.20 -37.12 -0.42 -2.77 16 3 C 0.24 5.45 5.11 -6.82 -0.03 5.42 16 4 N -0.42 -9.62 2.58 -119.17 -0.31 -9.92 16 5 C -0.35 -7.88 6.96 -15.00 -0.10 -7.98 16 6 H 0.10 2.25 6.13 -52.49 -0.32 1.93 16 7 C 0.04 0.96 4.97 -17.45 -0.09 0.87 16 8 N -0.84 -19.77 9.40 55.50 0.52 -19.25 16 9 Si 0.92 17.50 29.58 -169.99 -5.03 12.47 16 10 H -0.28 -5.33 7.11 56.52 0.40 -4.93 16 11 H -0.28 -5.45 7.11 56.52 0.40 -5.05 16 12 H -0.27 -4.92 7.11 56.52 0.40 -4.52 16 13 C 0.49 11.29 7.22 -12.53 -0.09 11.20 16 14 O -0.61 -14.95 16.16 5.25 0.08 -14.87 16 15 C -0.10 -1.95 5.19 -104.93 -0.54 -2.49 16 16 C -0.02 -0.32 7.71 -39.11 -0.30 -0.62 16 17 C -0.14 -2.02 9.98 -39.73 -0.40 -2.42 16 18 C -0.04 -0.53 10.09 -39.09 -0.39 -0.92 16 19 C -0.03 -0.61 7.26 -84.76 -0.62 -1.22 16 20 N -0.22 -4.03 12.40 32.15 0.40 -3.63 16 21 N -0.02 -0.37 13.83 60.35 0.83 0.47 16 22 N -0.48 -8.73 7.46 32.50 0.24 -8.49 16 23 H 0.45 7.55 8.62 -182.48 -1.57 5.98 16 24 C 0.13 2.50 6.95 -83.91 -0.58 1.92 16 25 H 0.20 3.45 7.80 -54.08 -0.42 3.03 16 26 H 0.10 2.27 6.83 -51.93 -0.35 1.92 16 27 H 0.07 1.50 7.54 -51.93 -0.39 1.11 16 28 H 0.27 6.21 8.31 -40.82 -0.34 5.87 16 29 H 0.16 2.99 6.46 -52.49 -0.34 2.66 16 30 H 0.14 1.49 8.06 -52.49 -0.42 1.07 16 31 H 0.13 1.53 8.06 -52.49 -0.42 1.10 16 LS Contribution 282.42 15.07 4.26 4.26 Total: -1.00 -27.56 282.42 -5.38 -32.94 By element: Atomic # 1 Polarization: 13.53 SS G_CDS: -3.38 Total: 10.15 kcal Atomic # 6 Polarization: -1.12 SS G_CDS: -3.00 Total: -4.12 kcal Atomic # 7 Polarization: -42.52 SS G_CDS: 1.69 Total: -40.83 kcal Atomic # 8 Polarization: -14.95 SS G_CDS: 0.08 Total: -14.87 kcal Atomic # 14 Polarization: 17.50 SS G_CDS: -5.03 Total: 12.47 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -27.56 -5.38 -32.94 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490964099.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 177.205 kcal (2) G-P(sol) polarization free energy of solvation -27.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.940 kcal (6) G-S(sol) free energy of system = (1) + (5) 144.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds