Wall clock time and date at job start Mon Mar 30 2020 01:26:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.42904 * 113.99543 * 2 1 4 4 C 1.53001 * 109.46804 * 180.02562 * 3 2 1 5 5 N 1.46504 * 109.47295 * 65.00167 * 4 3 2 6 6 C 1.36933 * 119.99798 * 275.95766 * 5 4 3 7 7 H 1.08001 * 119.99493 * 146.29771 * 6 5 4 8 8 C 1.38810 * 120.00248 * 326.28626 * 6 5 4 9 9 N 1.31623 * 119.99925 * 336.38102 * 8 6 5 10 10 Si 1.86800 * 119.99836 * 156.37590 * 8 6 5 11 11 H 1.48491 * 109.47149 * 90.00909 * 10 8 6 12 12 H 1.48511 * 109.47002 * 210.00398 * 10 8 6 13 13 H 1.48495 * 109.47350 * 329.99999 * 10 8 6 14 14 C 1.46497 * 119.99877 * 95.95392 * 5 4 3 15 15 C 1.50706 * 109.47342 * 270.00424 * 14 5 4 16 16 N 1.31880 * 119.62107 * 269.98030 * 15 14 5 17 17 C 1.31857 * 121.73370 * 179.72337 * 16 15 14 18 18 C 1.38233 * 120.79184 * 0.58665 * 17 16 15 19 19 C 1.38607 * 119.17394 * 359.42384 * 18 17 16 20 20 C 1.38299 * 119.62931 * 89.99575 * 15 14 5 21 21 Cl 1.73599 * 120.43271 * 359.96549 * 20 15 14 22 22 H 1.09005 * 109.47473 * 299.99430 * 1 2 3 23 23 H 1.09004 * 109.47683 * 59.99951 * 1 2 3 24 24 H 1.09004 * 109.47257 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.47476 * 60.00443 * 3 2 1 26 26 H 1.08997 * 109.47571 * 300.00050 * 3 2 1 27 27 H 1.08994 * 109.47673 * 304.99876 * 4 3 2 28 28 H 1.09002 * 109.47301 * 185.00262 * 4 3 2 29 29 H 0.96996 * 119.99574 * 179.97438 * 9 8 6 30 30 H 1.09003 * 109.47594 * 150.00267 * 14 5 4 31 31 H 1.09003 * 109.47461 * 29.99889 * 14 5 4 32 32 H 1.07996 * 119.60435 * 180.31403 * 17 16 15 33 33 H 1.08003 * 120.41435 * 179.70470 * 18 17 16 34 34 H 1.07999 * 120.79390 * 180.29536 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5353 1.1848 -0.0006 5 7 3.9756 0.5646 -1.2528 6 6 3.9801 -0.7991 -1.3768 7 1 3.7633 -1.2552 -2.3315 8 6 4.2635 -1.5953 -0.2756 9 7 4.9611 -1.1065 0.7279 10 14 3.6547 -3.3604 -0.2178 11 1 4.6766 -4.2562 -0.8163 12 1 3.4157 -3.7556 1.1937 13 1 2.3879 -3.4725 -0.9844 14 6 4.4109 1.4034 -2.3722 15 6 3.2266 1.7311 -3.2447 16 7 2.9157 0.9336 -4.2480 17 6 1.8856 1.1775 -5.0342 18 6 1.0954 2.2948 -4.8391 19 6 1.3903 3.1569 -3.7946 20 6 2.4785 2.8647 -2.9844 21 17 2.8948 3.9084 -1.6612 22 1 -0.3634 0.5138 0.8901 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 1.6885 1.8464 0.8900 26 1 1.6884 1.8465 -0.8899 27 1 3.8514 0.5684 0.8409 28 1 3.9784 2.1766 0.0890 29 1 5.1587 -1.6627 1.4975 30 1 5.1573 0.8678 -2.9589 31 1 4.8450 2.3262 -1.9874 32 1 1.6591 0.4985 -5.8429 33 1 0.2559 2.4911 -5.4897 34 1 0.7875 4.0349 -3.6155 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000599437639.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:58 Heat of formation + Delta-G solvation = 15.573231 kcal Electronic energy + Delta-G solvation = -19487.830091 eV Core-core repulsion = 16448.107304 eV Total energy + Delta-G solvation = -3039.722788 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -39.90027 -37.11063 -36.30734 -35.27221 -32.36959 -31.66883 -30.47823 -28.71612 -25.99115 -25.58879 -23.29033 -23.19153 -21.70748 -20.18894 -16.93772 -16.56415 -16.12964 -15.78189 -15.48178 -14.90651 -14.63426 -14.01139 -13.87162 -13.53123 -13.27637 -12.95532 -12.83035 -12.13307 -12.00212 -11.53187 -11.40450 -11.15833 -10.79138 -10.67538 -10.54431 -10.41279 -10.04870 -9.87479 -9.58177 -9.51281 -9.14238 -8.70553 -8.48704 -8.28362 -6.54106 -5.61488 -3.15012 1.27018 1.46169 2.35958 3.51528 3.57764 3.65928 4.01133 4.66673 4.77236 4.81064 4.91586 4.99962 5.22050 5.51804 5.55816 5.63018 5.81897 5.87319 5.88994 6.08865 6.14203 6.19854 6.25782 6.40011 6.45070 6.65087 6.77375 6.83552 6.86980 7.77393 8.03575 8.18491 8.36377 8.65397 9.31543 9.95987 10.46013 11.39778 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.019397 B = 0.008119 C = 0.007702 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1443.209555 B = 3447.930018 C = 3634.561282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.350 6.350 3 C 0.047 3.953 4 C 0.136 3.864 5 N -0.559 5.559 6 C -0.236 4.236 7 H 0.063 0.937 8 C 0.021 3.979 9 N -0.892 5.892 10 Si 0.900 3.100 11 H -0.292 1.292 12 H -0.292 1.292 13 H -0.280 1.280 14 C 0.178 3.822 15 C 0.154 3.846 16 N -0.454 5.454 17 C 0.101 3.899 18 C -0.185 4.185 19 C -0.074 4.074 20 C -0.088 4.088 21 Cl -0.060 7.060 22 H 0.025 0.975 23 H 0.024 0.976 24 H 0.072 0.928 25 H 0.020 0.980 26 H 0.031 0.969 27 H 0.109 0.891 28 H 0.043 0.957 29 H 0.251 0.749 30 H 0.073 0.927 31 H 0.061 0.939 32 H 0.154 0.846 33 H 0.134 0.866 34 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.745 9.682 -6.666 14.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.268 6.268 3 C -0.032 4.032 4 C 0.010 3.990 5 N -0.276 5.276 6 C -0.365 4.365 7 H 0.081 0.919 8 C -0.178 4.178 9 N -0.536 5.536 10 Si 0.730 3.270 11 H -0.219 1.219 12 H -0.219 1.219 13 H -0.205 1.205 14 C 0.050 3.950 15 C 0.012 3.988 16 N -0.163 5.163 17 C -0.057 4.057 18 C -0.206 4.206 19 C -0.101 4.101 20 C -0.118 4.118 21 Cl -0.031 7.031 22 H 0.043 0.957 23 H 0.043 0.957 24 H 0.091 0.909 25 H 0.038 0.962 26 H 0.049 0.951 27 H 0.127 0.873 28 H 0.061 0.939 29 H 0.061 0.939 30 H 0.091 0.909 31 H 0.079 0.921 32 H 0.171 0.829 33 H 0.151 0.849 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -6.977 8.759 -6.509 12.952 hybrid contribution -1.594 0.255 0.308 1.644 sum -8.571 9.014 -6.200 13.898 Atomic orbital electron populations 1.22597 0.84726 1.01244 0.98099 1.88249 1.16107 1.27686 1.94749 1.23479 0.98792 0.84032 0.96892 1.21232 0.87893 0.96672 0.93190 1.43654 1.72954 1.02337 1.08704 1.18914 1.40607 0.80423 0.96568 0.91919 1.24856 0.97317 0.97513 0.98091 1.69936 1.37894 1.36399 1.09390 0.86357 0.78994 0.85044 0.76585 1.21943 1.21869 1.20538 1.19988 0.89725 0.96016 0.89314 1.23108 0.97889 0.86508 0.91268 1.67851 1.16392 1.28186 1.03868 1.22908 0.90627 0.94892 0.97249 1.21974 1.02189 0.96883 0.99523 1.21411 0.95125 0.99603 0.93935 1.21921 0.99696 0.96215 0.93971 1.98343 1.92976 1.65517 1.46282 0.95652 0.95740 0.90900 0.96235 0.95113 0.87335 0.93854 0.93867 0.90860 0.92130 0.82893 0.84855 0.84766 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.57 11.01 101.05 1.11 1.68 16 2 O -0.35 -8.27 9.89 -35.23 -0.35 -8.62 16 3 C 0.05 1.01 5.81 37.16 0.22 1.23 16 4 C 0.14 3.22 5.24 -4.04 -0.02 3.20 16 5 N -0.56 -13.85 2.45 -174.60 -0.43 -14.28 16 6 C -0.24 -6.57 8.68 -15.06 -0.13 -6.70 16 7 H 0.06 1.82 7.93 -52.49 -0.42 1.40 16 8 C 0.02 0.60 4.99 -17.43 -0.09 0.51 16 9 N -0.89 -25.98 11.27 55.49 0.63 -25.36 16 10 Si 0.90 23.06 29.61 -169.99 -5.03 18.03 16 11 H -0.29 -7.40 7.11 56.52 0.40 -7.00 16 12 H -0.29 -7.52 7.11 56.52 0.40 -7.12 16 13 H -0.28 -7.23 7.11 56.52 0.40 -6.83 16 14 C 0.18 3.81 5.60 -5.19 -0.03 3.78 16 15 C 0.15 2.99 6.28 -82.55 -0.52 2.47 16 16 N -0.45 -8.72 10.27 -9.44 -0.10 -8.81 16 17 C 0.10 1.52 11.18 -17.54 -0.20 1.32 16 18 C -0.19 -2.38 10.11 -39.45 -0.40 -2.78 16 19 C -0.07 -1.03 9.98 -39.24 -0.39 -1.42 16 20 C -0.09 -1.48 4.96 -39.36 -0.20 -1.67 16 21 Cl -0.06 -0.93 24.00 -51.86 -1.24 -2.18 16 22 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 23 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 24 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 25 H 0.02 0.39 8.14 -51.93 -0.42 -0.04 16 26 H 0.03 0.64 5.08 -51.93 -0.26 0.37 16 27 H 0.11 2.97 5.32 -51.93 -0.28 2.69 16 28 H 0.04 0.93 6.86 -51.93 -0.36 0.58 16 29 H 0.25 7.13 8.31 -40.82 -0.34 6.79 16 30 H 0.07 1.62 8.04 -51.93 -0.42 1.21 16 31 H 0.06 1.19 6.61 -51.93 -0.34 0.85 16 32 H 0.15 1.82 8.06 -52.49 -0.42 1.40 16 33 H 0.13 1.24 8.06 -52.48 -0.42 0.81 16 34 H 0.13 1.49 8.06 -52.49 -0.42 1.07 16 LS Contribution 297.55 15.07 4.48 4.48 Total: -1.00 -31.27 297.55 -6.85 -38.12 By element: Atomic # 1 Polarization: 1.17 SS G_CDS: -4.17 Total: -2.99 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -0.64 Total: 1.62 kcal Atomic # 7 Polarization: -48.55 SS G_CDS: 0.10 Total: -48.45 kcal Atomic # 8 Polarization: -8.27 SS G_CDS: -0.35 Total: -8.62 kcal Atomic # 14 Polarization: 23.06 SS G_CDS: -5.03 Total: 18.03 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.24 Total: -2.18 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -31.27 -6.85 -38.12 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000599437639.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.689 kcal (2) G-P(sol) polarization free energy of solvation -31.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.849 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.116 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds