Wall clock time and date at job start Mon Mar 30 2020 01:19:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 N 1.46500 * 109.46797 * 2 1 4 4 C 1.35630 * 125.67478 * 263.42473 * 3 2 1 5 5 C 1.35524 * 108.84996 * 180.29457 * 4 3 2 6 6 Cl 1.73598 * 126.07268 * 179.71233 * 5 4 3 7 7 C 1.39892 * 107.84960 * 359.73580 * 5 4 3 8 8 C 1.37633 * 125.67618 * 83.26465 * 3 2 1 9 9 C 1.46677 * 126.22299 * 359.96559 * 8 3 2 10 10 O 1.21690 * 119.99793 * 4.74258 * 9 8 3 11 11 N 1.34771 * 119.99737 * 184.73616 * 9 8 3 12 12 C 1.46502 * 119.99867 * 174.99111 * 11 9 8 13 13 C 1.53001 * 109.47255 * 180.02562 * 12 11 9 14 14 C 1.50698 * 109.47110 * 180.02562 * 13 12 11 15 15 H 1.08003 * 120.00022 * 359.97438 * 14 13 12 16 16 C 1.37877 * 120.00329 * 180.02562 * 14 13 12 17 17 N 1.31514 * 119.99392 * 359.97438 * 16 14 13 18 18 Si 1.86794 * 120.00514 * 179.97438 * 16 14 13 19 19 H 1.48497 * 109.47165 * 89.99510 * 18 16 14 20 20 H 1.48497 * 109.47615 * 209.99908 * 18 16 14 21 21 H 1.48504 * 109.47068 * 330.00253 * 18 16 14 22 22 H 1.09003 * 109.46925 * 180.02562 * 1 2 3 23 23 H 1.08995 * 109.46903 * 299.99388 * 1 2 3 24 24 H 1.08999 * 109.47313 * 60.00274 * 1 2 3 25 25 H 1.08999 * 109.46588 * 239.99924 * 2 1 3 26 26 H 1.08997 * 109.47242 * 120.00265 * 2 1 3 27 27 H 1.07999 * 125.57670 * 359.97438 * 4 3 2 28 28 H 1.07993 * 126.45027 * 179.97438 * 7 5 4 29 29 H 0.96997 * 120.00550 * 354.99462 * 11 9 8 30 30 H 1.09003 * 109.46735 * 60.00359 * 12 11 9 31 31 H 1.08994 * 109.47125 * 300.00633 * 12 11 9 32 32 H 1.08999 * 109.46756 * 300.00074 * 13 12 11 33 33 H 1.09001 * 109.46587 * 60.00424 * 13 12 11 34 34 H 0.97001 * 119.99501 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.4009 2.0849 -1.0945 5 6 2.7971 3.3208 -0.7041 6 17 3.3806 4.5830 -1.7433 7 6 2.6527 3.3984 0.6852 8 6 2.1622 2.1817 1.1103 9 6 1.8555 1.8068 2.4948 10 8 1.5129 0.6686 2.7552 11 7 1.9533 2.7229 3.4784 12 6 1.5424 2.3801 4.8422 13 6 1.7532 3.5881 5.7573 14 6 1.3311 3.2352 7.1602 15 1 0.9502 2.2482 7.3774 16 6 1.4302 4.1726 8.1664 17 7 1.8936 5.3746 7.9018 18 14 0.9064 3.7355 9.9053 19 1 2.0669 3.1805 10.6471 20 1 0.4149 4.9549 10.5956 21 1 -0.1791 2.7233 9.8556 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5137 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 1.8933 -0.5139 -0.8900 26 1 1.8934 -0.5139 0.8899 27 1 2.3960 1.7185 -2.1104 28 1 2.8825 4.2505 1.3075 29 1 2.2957 3.6093 3.2834 30 1 2.1401 1.5426 5.2020 31 1 0.4885 2.1020 4.8450 32 1 2.8070 3.8664 5.7544 33 1 1.1552 4.4252 5.3972 34 1 1.9630 6.0343 8.6096 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000706247186.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:19:47 Heat of formation + Delta-G solvation = -12.199977 kcal Electronic energy + Delta-G solvation = -17856.321137 eV Core-core repulsion = 14815.394012 eV Total energy + Delta-G solvation = -3040.927124 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.57437 -38.76030 -36.50641 -35.06811 -34.10259 -32.84212 -30.41156 -29.34826 -28.74318 -24.96186 -23.77345 -22.43256 -21.13731 -20.53675 -19.44278 -17.88713 -16.48859 -15.85366 -15.49715 -15.23327 -14.68498 -14.60576 -14.42656 -14.19234 -13.57942 -13.21092 -13.03731 -12.84124 -12.72656 -12.32141 -12.21503 -11.51752 -11.39111 -11.22927 -11.05018 -10.93637 -10.65821 -10.36664 -9.91019 -9.55965 -9.26729 -8.80122 -8.65856 -8.43425 -8.22758 -6.10284 -4.13446 1.41267 2.02160 2.37065 2.76309 3.28950 3.35253 3.38804 3.51298 3.70053 4.40828 4.52943 4.71833 4.86339 4.92060 5.09581 5.13734 5.26889 5.40939 5.50414 5.67233 5.86284 5.96731 6.22309 6.29674 6.39877 6.67138 6.70676 6.82198 6.94388 7.49662 7.59396 7.87069 7.91847 8.24854 8.50747 8.92268 9.51496 11.01297 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.023453 B = 0.003802 C = 0.003319 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1193.583203 B = 7363.469742 C = 8433.081530 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C 0.097 3.903 3 N -0.401 5.401 4 C 0.025 3.975 5 C -0.121 4.121 6 Cl -0.054 7.054 7 C -0.133 4.133 8 C -0.025 4.025 9 C 0.579 3.421 10 O -0.554 6.554 11 N -0.706 5.706 12 C 0.124 3.876 13 C 0.012 3.988 14 C -0.523 4.523 15 H 0.059 0.941 16 C 0.060 3.940 17 N -0.893 5.893 18 Si 0.897 3.103 19 H -0.279 1.279 20 H -0.286 1.286 21 H -0.273 1.273 22 H 0.076 0.924 23 H 0.069 0.931 24 H 0.057 0.943 25 H 0.089 0.911 26 H 0.111 0.889 27 H 0.175 0.825 28 H 0.154 0.846 29 H 0.401 0.599 30 H 0.059 0.941 31 H 0.058 0.942 32 H 0.024 0.976 33 H 0.024 0.976 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.887 -6.104 -19.892 20.826 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.023 4.023 3 N -0.074 5.074 4 C -0.112 4.112 5 C -0.154 4.154 6 Cl -0.026 7.026 7 C -0.160 4.160 8 C -0.139 4.139 9 C 0.365 3.635 10 O -0.435 6.435 11 N -0.355 5.355 12 C 0.002 3.998 13 C -0.026 4.026 14 C -0.561 4.561 15 H 0.078 0.922 16 C -0.142 4.142 17 N -0.532 5.532 18 Si 0.724 3.276 19 H -0.206 1.206 20 H -0.212 1.212 21 H -0.197 1.197 22 H 0.094 0.906 23 H 0.088 0.912 24 H 0.076 0.924 25 H 0.108 0.892 26 H 0.129 0.871 27 H 0.192 0.808 28 H 0.172 0.828 29 H 0.235 0.765 30 H 0.078 0.922 31 H 0.076 0.924 32 H 0.042 0.958 33 H 0.042 0.958 34 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 0.564 -7.012 -19.635 20.857 hybrid contribution 0.008 0.518 0.673 0.849 sum 0.572 -6.494 -18.962 20.052 Atomic orbital electron populations 1.22082 0.93783 1.03210 1.03076 1.22118 0.96211 0.78820 1.05157 1.44026 1.46441 1.11829 1.05097 1.21640 1.05441 0.91736 0.92334 1.19873 1.12494 0.91416 0.91645 1.98318 1.87565 1.50582 1.66131 1.21270 1.04275 0.97044 0.93369 1.20279 1.12890 0.91906 0.88849 1.16929 0.78173 0.85315 0.83071 1.90760 1.49384 1.19403 1.83910 1.46059 1.64265 1.15446 1.09764 1.21793 0.99051 1.00775 0.78138 1.19340 0.97942 0.91782 0.93519 1.21026 1.43422 0.98880 0.92806 0.92242 1.24990 0.95067 0.94902 0.99266 1.69956 1.45789 1.04211 1.33201 0.86512 0.78959 0.77921 0.84159 1.20554 1.21153 1.19744 0.90561 0.91157 0.92385 0.89248 0.87127 0.80817 0.82798 0.76469 0.92220 0.92359 0.95782 0.95780 0.92804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -1.59 10.23 37.16 0.38 -1.21 16 2 C 0.10 0.98 6.14 -4.04 -0.02 0.95 16 3 N -0.40 -4.83 2.76 -112.82 -0.31 -5.14 16 4 C 0.03 0.27 11.35 -16.84 -0.19 0.07 16 5 C -0.12 -1.45 6.66 -39.93 -0.27 -1.71 16 6 Cl -0.05 -0.59 29.30 -51.86 -1.52 -2.11 16 7 C -0.13 -1.74 10.35 -39.09 -0.40 -2.15 16 8 C -0.02 -0.36 6.89 -81.98 -0.56 -0.92 16 9 C 0.58 9.89 7.77 -12.86 -0.10 9.79 16 10 O -0.55 -10.65 14.51 5.20 0.08 -10.58 16 11 N -0.71 -12.33 5.54 -61.62 -0.34 -12.67 16 12 C 0.12 2.58 5.62 -4.04 -0.02 2.56 16 13 C 0.01 0.28 5.09 -27.88 -0.14 0.14 16 14 C -0.52 -14.31 9.11 -34.44 -0.31 -14.62 16 15 H 0.06 1.59 7.74 -52.48 -0.41 1.18 16 16 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 17 N -0.89 -25.91 13.29 55.43 0.74 -25.17 16 18 Si 0.90 21.19 29.54 -169.99 -5.02 16.17 16 19 H -0.28 -6.53 7.11 56.52 0.40 -6.12 16 20 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 21 H -0.27 -6.33 7.11 56.52 0.40 -5.93 16 22 H 0.08 0.60 8.14 -51.93 -0.42 0.18 16 23 H 0.07 0.89 7.85 -51.93 -0.41 0.48 16 24 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 25 H 0.09 0.61 8.12 -51.93 -0.42 0.19 16 26 H 0.11 1.32 6.61 -51.93 -0.34 0.98 16 27 H 0.17 1.26 8.06 -52.49 -0.42 0.83 16 28 H 0.15 1.81 7.45 -52.49 -0.39 1.42 16 29 H 0.40 6.21 7.37 -40.82 -0.30 5.91 16 30 H 0.06 1.28 8.14 -51.93 -0.42 0.86 16 31 H 0.06 1.24 8.14 -51.93 -0.42 0.82 16 32 H 0.02 0.61 8.14 -51.93 -0.42 0.19 16 33 H 0.02 0.61 8.14 -51.93 -0.42 0.19 16 34 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 LS Contribution 311.27 15.07 4.69 4.69 Total: -1.00 -30.72 311.27 -7.80 -38.52 By element: Atomic # 1 Polarization: 6.19 SS G_CDS: -4.36 Total: 1.83 kcal Atomic # 6 Polarization: -3.79 SS G_CDS: -1.75 Total: -5.53 kcal Atomic # 7 Polarization: -43.07 SS G_CDS: 0.08 Total: -42.98 kcal Atomic # 8 Polarization: -10.65 SS G_CDS: 0.08 Total: -10.58 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.02 Total: 16.17 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.52 Total: -2.11 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -30.72 -7.80 -38.52 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000706247186.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.319 kcal (2) G-P(sol) polarization free energy of solvation -30.717 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.398 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.802 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.519 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds