Wall clock time and date at job start Mon Mar 30 2020 01:27:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42902 * 114.00001 * 2 1 4 4 C 1.52993 * 109.47160 * 179.97438 * 3 2 1 5 5 N 1.46500 * 109.46895 * 64.99967 * 4 3 2 6 6 C 1.36935 * 120.00232 * 269.99856 * 5 4 3 7 7 H 1.08003 * 120.00299 * 143.32739 * 6 5 4 8 8 C 1.38807 * 120.00174 * 323.33287 * 6 5 4 9 9 N 1.31626 * 119.99694 * 338.56461 * 8 6 5 10 10 Si 1.86801 * 120.00303 * 158.56865 * 8 6 5 11 11 H 1.48498 * 109.47302 * 59.99792 * 10 8 6 12 12 H 1.48500 * 109.47080 * 179.97438 * 10 8 6 13 13 H 1.48497 * 109.46883 * 299.99713 * 10 8 6 14 14 C 1.46508 * 120.00028 * 90.00177 * 5 4 3 15 15 C 1.50696 * 109.47154 * 90.51956 * 14 5 4 16 16 C 1.38717 * 120.40375 * 89.07544 * 15 14 5 17 17 C 1.38561 * 118.43460 * 180.02562 * 16 15 14 18 18 C 1.38394 * 119.15141 * 0.02562 * 17 16 15 19 19 Cl 1.73603 * 119.63365 * 179.97438 * 18 17 16 20 20 N 1.31948 * 120.73225 * 359.97438 * 18 17 16 21 21 C 1.31909 * 121.70608 * 0.04144 * 20 18 17 22 22 H 1.08995 * 109.47152 * 180.02562 * 1 2 3 23 23 H 1.09002 * 109.46841 * 299.99949 * 1 2 3 24 24 H 1.09002 * 109.47035 * 59.99943 * 1 2 3 25 25 H 1.09005 * 109.46693 * 59.99911 * 3 2 1 26 26 H 1.08998 * 109.47038 * 300.00047 * 3 2 1 27 27 H 1.08995 * 109.47227 * 305.00501 * 4 3 2 28 28 H 1.08994 * 109.47364 * 184.99813 * 4 3 2 29 29 H 0.97002 * 119.99523 * 179.97438 * 9 8 6 30 30 H 1.08997 * 109.46576 * 330.52130 * 14 5 4 31 31 H 1.09001 * 109.47142 * 210.51891 * 14 5 4 32 32 H 1.07997 * 120.77993 * 0.02562 * 16 15 14 33 33 H 1.08005 * 120.42114 * 179.72892 * 17 16 15 34 34 H 1.07994 * 119.60774 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 7 3.9766 0.5640 -1.2509 6 6 4.0978 -0.7974 -1.3345 7 1 3.8369 -1.3076 -2.2500 8 6 4.5557 -1.5218 -0.2426 9 7 5.2581 -0.9237 0.6962 10 14 4.1754 -3.3456 -0.1055 11 1 4.7472 -4.0598 -1.2752 12 1 4.7732 -3.8834 1.1429 13 1 2.7040 -3.5434 -0.0756 14 6 4.2883 1.3998 -2.4131 15 6 5.7489 1.7697 -2.3886 16 6 6.6904 0.9520 -2.9963 17 6 8.0223 1.3309 -2.9488 18 6 8.3667 2.5042 -2.3006 19 17 10.0318 2.9906 -2.2329 20 7 7.4435 3.2573 -1.7335 21 6 6.1668 2.9264 -1.7596 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 1.6886 1.8464 0.8900 26 1 1.6886 1.8464 -0.8900 27 1 3.8508 0.5685 0.8426 28 1 3.9784 2.1765 0.0902 29 1 5.5778 -1.4299 1.4595 30 1 3.6834 2.3061 -2.3814 31 1 4.0684 0.8480 -3.3270 32 1 6.3922 0.0415 -3.4947 33 1 8.7826 0.7161 -3.4075 34 1 5.4396 3.5677 -1.2840 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000835067385.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:04 Heat of formation + Delta-G solvation = 5.174796 kcal Electronic energy + Delta-G solvation = -18681.339067 eV Core-core repulsion = 15641.165369 eV Total energy + Delta-G solvation = -3040.173698 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -39.64117 -37.27647 -36.29647 -35.42850 -32.43941 -31.57751 -30.59125 -28.63332 -25.77335 -25.71930 -23.39976 -23.07326 -21.74164 -20.10354 -17.03554 -16.73135 -15.98854 -15.80599 -15.21787 -14.92262 -14.48136 -14.07235 -14.02287 -13.51513 -13.40786 -13.20484 -12.61755 -12.16669 -11.77866 -11.30821 -11.22546 -11.19155 -10.96548 -10.86393 -10.78064 -10.70575 -10.21345 -10.08760 -9.82488 -9.28421 -9.08926 -8.88265 -8.51470 -8.25888 -6.69570 -5.83051 -3.36596 1.51098 1.78877 2.25145 3.38240 3.44550 3.49742 4.19479 4.50106 4.63390 4.98126 5.30430 5.37195 5.46744 5.48923 5.62095 5.71174 5.76878 5.82453 5.98132 6.03103 6.09791 6.21285 6.27910 6.39918 6.47910 6.59269 6.65948 6.94687 7.11353 7.57850 7.76937 8.01333 8.25216 8.46278 9.09313 9.73231 10.27052 11.17528 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.021207 B = 0.005780 C = 0.004957 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1320.024273 B = 4843.528828 C = 5647.217469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.355 6.355 3 C 0.048 3.952 4 C 0.140 3.860 5 N -0.562 5.562 6 C -0.244 4.244 7 H 0.061 0.939 8 C 0.022 3.978 9 N -0.883 5.883 10 Si 0.900 3.100 11 H -0.284 1.284 12 H -0.293 1.293 13 H -0.279 1.279 14 C 0.176 3.824 15 C -0.117 4.117 16 C -0.047 4.047 17 C -0.152 4.152 18 C 0.151 3.849 19 Cl -0.060 7.060 20 N -0.484 5.484 21 C 0.113 3.887 22 H 0.074 0.926 23 H 0.026 0.974 24 H 0.029 0.971 25 H 0.026 0.974 26 H 0.029 0.971 27 H 0.105 0.895 28 H 0.041 0.959 29 H 0.256 0.744 30 H 0.049 0.951 31 H 0.058 0.942 32 H 0.138 0.862 33 H 0.133 0.867 34 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.320 5.497 -5.206 7.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.272 6.272 3 C -0.031 4.031 4 C 0.014 3.986 5 N -0.279 5.279 6 C -0.374 4.374 7 H 0.078 0.922 8 C -0.179 4.179 9 N -0.524 5.524 10 Si 0.729 3.271 11 H -0.210 1.210 12 H -0.219 1.219 13 H -0.205 1.205 14 C 0.050 3.950 15 C -0.123 4.123 16 C -0.074 4.074 17 C -0.173 4.173 18 C -0.013 4.013 19 Cl -0.032 7.032 20 N -0.195 5.195 21 C -0.045 4.045 22 H 0.093 0.907 23 H 0.045 0.955 24 H 0.048 0.952 25 H 0.045 0.955 26 H 0.047 0.953 27 H 0.123 0.877 28 H 0.059 0.941 29 H 0.066 0.934 30 H 0.068 0.932 31 H 0.077 0.923 32 H 0.156 0.844 33 H 0.151 0.849 34 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.758 6.048 -4.601 7.636 hybrid contribution -0.373 -1.437 -0.001 1.485 sum -1.131 4.610 -4.602 6.611 Atomic orbital electron populations 1.22634 0.84182 1.01505 0.98430 1.88224 1.16597 1.27582 1.94828 1.23353 0.98481 0.84230 0.97011 1.21083 0.87719 0.96861 0.92921 1.43952 1.72956 1.02541 1.08501 1.18869 1.37447 0.81082 1.00004 0.92177 1.25103 0.96075 0.97939 0.98765 1.69952 1.34226 1.36117 1.12098 0.86430 0.78616 0.85150 0.76863 1.21005 1.21861 1.20504 1.20097 0.86995 0.94730 0.93215 1.22190 1.01388 0.93484 0.95258 1.21379 0.91203 0.98382 0.96407 1.21691 0.97733 0.96248 1.01669 1.21287 0.86828 0.93258 0.99944 1.98345 1.15030 1.92459 1.97381 1.66798 1.01885 1.33269 1.17553 1.22321 0.90219 0.95384 0.96592 0.90736 0.95526 0.95241 0.95541 0.95318 0.87710 0.94058 0.93436 0.93223 0.92325 0.84370 0.84926 0.83090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.48 11.01 101.05 1.11 1.59 16 2 O -0.35 -7.48 10.18 -35.23 -0.36 -7.84 16 3 C 0.05 0.92 6.28 37.15 0.23 1.15 16 4 C 0.14 3.06 5.72 -4.05 -0.02 3.04 16 5 N -0.56 -12.66 2.40 -174.62 -0.42 -13.08 16 6 C -0.24 -6.20 8.97 -15.06 -0.14 -6.34 16 7 H 0.06 1.53 7.92 -52.48 -0.42 1.12 16 8 C 0.02 0.59 4.96 -17.43 -0.09 0.50 16 9 N -0.88 -24.57 11.41 55.49 0.63 -23.94 16 10 Si 0.90 21.44 29.60 -169.99 -5.03 16.40 16 11 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 12 H -0.29 -7.08 7.11 56.52 0.40 -6.68 16 13 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 14 C 0.18 3.29 5.82 -5.19 -0.03 3.26 16 15 C -0.12 -2.18 5.48 -104.48 -0.57 -2.75 16 16 C -0.05 -0.84 9.86 -39.29 -0.39 -1.23 16 17 C -0.15 -2.61 9.88 -39.40 -0.39 -3.00 16 18 C 0.15 2.75 7.27 -17.44 -0.13 2.62 16 19 Cl -0.06 -0.95 29.11 -51.86 -1.51 -2.46 16 20 N -0.48 -9.32 10.34 -10.36 -0.11 -9.43 16 21 C 0.11 2.07 10.86 -17.55 -0.19 1.88 16 22 H 0.07 1.10 8.14 -51.93 -0.42 0.68 16 23 H 0.03 0.37 8.14 -51.93 -0.42 -0.05 16 24 H 0.03 0.42 8.14 -51.93 -0.42 0.00 16 25 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 26 H 0.03 0.51 8.14 -51.93 -0.42 0.08 16 27 H 0.11 2.70 5.45 -51.93 -0.28 2.42 16 28 H 0.04 0.83 8.07 -51.93 -0.42 0.41 16 29 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 30 H 0.05 0.81 8.01 -51.93 -0.42 0.39 16 31 H 0.06 1.05 8.00 -51.93 -0.42 0.64 16 32 H 0.14 2.36 8.06 -52.49 -0.42 1.93 16 33 H 0.13 1.92 8.06 -52.48 -0.42 1.49 16 34 H 0.15 2.44 8.06 -52.49 -0.42 2.02 16 LS Contribution 311.11 15.07 4.69 4.69 Total: -1.00 -29.15 311.11 -7.17 -36.32 By element: Atomic # 1 Polarization: 3.09 SS G_CDS: -4.47 Total: -1.38 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -0.60 Total: 0.72 kcal Atomic # 7 Polarization: -46.56 SS G_CDS: 0.11 Total: -46.45 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -0.36 Total: -7.84 kcal Atomic # 14 Polarization: 21.44 SS G_CDS: -5.03 Total: 16.40 kcal Atomic # 17 Polarization: -0.95 SS G_CDS: -1.51 Total: -2.46 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -29.15 -7.17 -36.32 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000835067385.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.492 kcal (2) G-P(sol) polarization free energy of solvation -29.150 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.317 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds