Wall clock time and date at job start Mon Mar 30 2020 01:27:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.42902 * 114.00084 * 2 1 4 4 C 1.53003 * 109.46727 * 179.97438 * 3 2 1 5 5 N 1.46502 * 109.47091 * 66.83647 * 4 3 2 6 6 C 1.36936 * 119.99630 * 272.70270 * 5 4 3 7 7 H 1.08005 * 120.00246 * 325.02604 * 6 5 4 8 8 C 1.38814 * 120.00025 * 145.03497 * 6 5 4 9 9 N 1.31619 * 120.00116 * 157.02193 * 8 6 5 10 10 Si 1.86798 * 119.99762 * 337.01283 * 8 6 5 11 11 H 1.48506 * 109.46995 * 95.30500 * 10 8 6 12 12 H 1.48504 * 109.47474 * 215.29887 * 10 8 6 13 13 H 1.48499 * 109.47348 * 335.30244 * 10 8 6 14 14 C 1.46498 * 120.00400 * 92.69918 * 5 4 3 15 15 C 1.50701 * 109.46847 * 94.82303 * 14 5 4 16 16 C 1.38599 * 120.42544 * 96.29580 * 15 14 5 17 17 C 1.38670 * 118.43844 * 180.02562 * 16 15 14 18 18 C 1.38188 * 119.19094 * 0.02562 * 17 16 15 19 19 N 1.31878 * 120.78098 * 359.97333 * 18 17 16 20 20 C 1.31974 * 121.70674 * 0.02562 * 19 18 17 21 21 Cl 1.73603 * 119.63464 * 179.97438 * 20 19 18 22 22 H 1.09003 * 109.47346 * 180.02562 * 1 2 3 23 23 H 1.08998 * 109.46996 * 300.00327 * 1 2 3 24 24 H 1.08994 * 109.46596 * 60.00103 * 1 2 3 25 25 H 1.08998 * 109.46748 * 59.99779 * 3 2 1 26 26 H 1.08999 * 109.46945 * 299.99820 * 3 2 1 27 27 H 1.08996 * 109.47540 * 306.83308 * 4 3 2 28 28 H 1.08998 * 109.46541 * 186.82870 * 4 3 2 29 29 H 0.97003 * 119.99946 * 180.02562 * 9 8 6 30 30 H 1.09002 * 109.46932 * 334.82500 * 14 5 4 31 31 H 1.08999 * 109.47645 * 214.82289 * 14 5 4 32 32 H 1.08004 * 120.78510 * 0.04442 * 16 15 14 33 33 H 1.08002 * 120.40471 * 180.02562 * 17 16 15 34 34 H 1.07999 * 119.60773 * 180.26115 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5356 1.1845 0.0006 5 7 3.9799 0.6041 -1.2690 6 6 4.0482 -0.7559 -1.4133 7 1 4.3357 -1.3742 -0.5756 8 6 3.7480 -1.3401 -2.6362 9 7 4.2239 -2.5313 -2.9310 10 14 2.6685 -0.4356 -3.8633 11 1 3.5250 0.2959 -4.8311 12 1 1.8215 -1.4135 -4.5926 13 1 1.8007 0.5297 -3.1420 14 6 4.3512 1.4785 -2.3841 15 6 5.8417 1.7010 -2.3733 16 6 6.6722 0.9298 -3.1712 17 6 8.0374 1.1692 -3.1285 18 6 8.5221 2.1612 -2.2976 19 7 7.7031 2.8765 -1.5515 20 6 6.3986 2.6769 -1.5661 21 17 5.3700 3.6496 -0.5612 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3632 0.5138 -0.8900 25 1 1.6886 1.8463 0.8900 26 1 1.6887 1.8463 -0.8900 27 1 3.8488 0.5418 0.8234 28 1 3.9783 2.1730 0.1228 29 1 4.0144 -2.9393 -3.7858 30 1 3.8402 2.4358 -2.2809 31 1 4.0604 1.0111 -3.3249 32 1 6.2657 0.1607 -3.8113 33 1 8.7137 0.5873 -3.7373 34 1 9.5838 2.3562 -2.2623 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000835069196.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:07 Heat of formation + Delta-G solvation = 19.637889 kcal Electronic energy + Delta-G solvation = -19203.889678 eV Core-core repulsion = 16164.343147 eV Total energy + Delta-G solvation = -3039.546531 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.83964 -37.43129 -36.34777 -35.76275 -32.38546 -31.75583 -31.04155 -28.80005 -26.06156 -25.79947 -23.52126 -23.04225 -22.08231 -20.18347 -17.24645 -16.78189 -16.32863 -15.83907 -15.36499 -15.29534 -14.68712 -14.38225 -14.27979 -13.62167 -13.48131 -12.78996 -12.70834 -12.53530 -12.24498 -11.83868 -11.59613 -11.31222 -11.24827 -10.95302 -10.64006 -10.51810 -10.08766 -10.00651 -9.58154 -9.30974 -9.22890 -8.98492 -8.51324 -8.40131 -6.95990 -5.98750 -3.34701 1.33547 1.63086 2.18381 3.24070 3.44931 3.50453 4.02668 4.50764 4.51892 4.83322 5.03751 5.17607 5.31892 5.35579 5.43096 5.62667 5.65586 5.75081 5.86465 5.94131 6.00899 6.07012 6.07843 6.15930 6.33107 6.38430 6.50740 6.72931 6.79043 6.92968 7.85697 8.03667 8.06263 8.36537 8.94833 9.69883 10.04877 11.16941 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.017646 B = 0.009253 C = 0.006795 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1586.363755 B = 3025.204005 C = 4119.584693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.356 6.356 3 C 0.043 3.957 4 C 0.135 3.865 5 N -0.585 5.585 6 C -0.239 4.239 7 H 0.082 0.918 8 C 0.037 3.963 9 N -0.899 5.899 10 Si 0.869 3.131 11 H -0.289 1.289 12 H -0.302 1.302 13 H -0.268 1.268 14 C 0.168 3.832 15 C -0.107 4.107 16 C -0.042 4.042 17 C -0.168 4.168 18 C 0.094 3.906 19 N -0.487 5.487 20 C 0.173 3.827 21 Cl -0.041 7.041 22 H 0.078 0.922 23 H 0.028 0.972 24 H 0.030 0.970 25 H 0.030 0.970 26 H 0.036 0.964 27 H 0.059 0.941 28 H 0.072 0.928 29 H 0.262 0.738 30 H 0.060 0.940 31 H 0.062 0.938 32 H 0.143 0.857 33 H 0.136 0.864 34 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.333 9.925 1.071 10.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.274 6.274 3 C -0.036 4.036 4 C 0.009 3.991 5 N -0.305 5.305 6 C -0.367 4.367 7 H 0.100 0.900 8 C -0.162 4.162 9 N -0.540 5.540 10 Si 0.700 3.300 11 H -0.218 1.218 12 H -0.231 1.231 13 H -0.193 1.193 14 C 0.041 3.959 15 C -0.113 4.113 16 C -0.069 4.069 17 C -0.188 4.188 18 C -0.064 4.064 19 N -0.198 5.198 20 C 0.008 3.992 21 Cl -0.013 7.013 22 H 0.097 0.903 23 H 0.046 0.954 24 H 0.048 0.952 25 H 0.048 0.952 26 H 0.054 0.946 27 H 0.077 0.923 28 H 0.090 0.910 29 H 0.072 0.928 30 H 0.079 0.921 31 H 0.080 0.920 32 H 0.161 0.839 33 H 0.154 0.846 34 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.658 10.319 1.629 10.578 hybrid contribution -1.327 -0.032 -1.224 1.806 sum 0.331 10.287 0.405 10.300 Atomic orbital electron populations 1.22645 0.83634 1.01874 0.98499 1.88179 1.17184 1.27181 1.94870 1.23346 0.97698 0.84836 0.97739 1.21445 0.89608 0.98443 0.89610 1.44082 1.73367 1.03126 1.09892 1.18734 1.39444 0.80036 0.98521 0.90011 1.25300 0.97996 0.95198 0.97747 1.69872 1.44071 1.17099 1.22988 0.87111 0.82701 0.79191 0.80990 1.21766 1.23059 1.19285 1.20291 0.87018 0.94897 0.93661 1.21608 1.01337 0.93432 0.94953 1.21578 0.92621 0.96362 0.96378 1.22176 0.96386 0.99446 1.00834 1.22400 0.98745 0.92573 0.92670 1.66839 1.03099 1.27886 1.21935 1.21324 0.89255 0.93740 0.94836 1.98323 1.64277 1.70512 1.68156 0.90335 0.95353 0.95184 0.95158 0.94563 0.92269 0.91046 0.92834 0.92144 0.92006 0.83885 0.84643 0.82655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.51 11.01 101.05 1.11 1.62 16 2 O -0.36 -7.54 10.12 -35.23 -0.36 -7.90 16 3 C 0.04 0.81 6.27 37.16 0.23 1.04 16 4 C 0.13 2.70 6.07 -4.04 -0.02 2.67 16 5 N -0.59 -13.46 2.12 -174.61 -0.37 -13.83 16 6 C -0.24 -6.45 9.35 -15.06 -0.14 -6.59 16 7 H 0.08 2.46 8.06 -52.48 -0.42 2.04 16 8 C 0.04 1.03 5.33 -17.43 -0.09 0.94 16 9 N -0.90 -26.42 13.97 55.49 0.78 -25.64 16 10 Si 0.87 21.59 24.97 -169.99 -4.24 17.34 16 11 H -0.29 -6.81 6.67 56.52 0.38 -6.43 16 12 H -0.30 -7.76 7.11 56.52 0.40 -7.36 16 13 H -0.27 -6.60 7.11 56.52 0.40 -6.19 16 14 C 0.17 3.54 4.38 -5.19 -0.02 3.52 16 15 C -0.11 -2.11 5.45 -104.44 -0.57 -2.68 16 16 C -0.04 -0.79 9.83 -39.29 -0.39 -1.18 16 17 C -0.17 -2.58 10.11 -39.44 -0.40 -2.98 16 18 C 0.09 1.41 11.18 -17.55 -0.20 1.21 16 19 N -0.49 -8.59 10.34 -10.36 -0.11 -8.70 16 20 C 0.17 3.21 7.27 -17.45 -0.13 3.08 16 21 Cl -0.04 -0.68 24.35 -51.86 -1.26 -1.94 16 22 H 0.08 1.21 8.14 -51.93 -0.42 0.78 16 23 H 0.03 0.39 8.14 -51.93 -0.42 -0.03 16 24 H 0.03 0.48 8.14 -51.93 -0.42 0.06 16 25 H 0.03 0.48 8.14 -51.93 -0.42 0.06 16 26 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 27 H 0.06 1.23 8.06 -51.93 -0.42 0.81 16 28 H 0.07 1.28 4.31 -51.93 -0.22 1.05 16 29 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 30 H 0.06 1.16 7.09 -51.93 -0.37 0.79 16 31 H 0.06 1.41 2.68 -51.93 -0.14 1.27 16 32 H 0.14 2.82 8.06 -52.48 -0.42 2.39 16 33 H 0.14 1.64 8.06 -52.49 -0.42 1.22 16 34 H 0.16 1.74 8.06 -52.49 -0.42 1.32 16 LS Contribution 296.41 15.07 4.47 4.47 Total: -1.00 -30.68 296.41 -5.83 -36.50 By element: Atomic # 1 Polarization: 3.16 SS G_CDS: -4.11 Total: -0.96 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -0.61 Total: 0.66 kcal Atomic # 7 Polarization: -48.47 SS G_CDS: 0.30 Total: -48.17 kcal Atomic # 8 Polarization: -7.54 SS G_CDS: -0.36 Total: -7.90 kcal Atomic # 14 Polarization: 21.59 SS G_CDS: -4.24 Total: 17.34 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.26 Total: -1.94 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -30.68 -5.83 -36.50 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000835069196.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.141 kcal (2) G-P(sol) polarization free energy of solvation -30.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.826 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.503 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.638 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds