Wall clock time and date at job start Mon Mar 30 2020 01:27:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42902 * 113.99846 * 2 1 4 4 C 1.53006 * 109.47025 * 179.97438 * 3 2 1 5 5 N 1.46500 * 109.46757 * 64.99485 * 4 3 2 6 6 C 1.36937 * 120.00468 * 269.99783 * 5 4 3 7 7 H 1.07994 * 120.00156 * 142.56489 * 6 5 4 8 8 C 1.38820 * 119.99455 * 322.56756 * 6 5 4 9 9 N 1.31615 * 119.99542 * 158.16496 * 8 6 5 10 10 Si 1.86797 * 120.00091 * 338.16036 * 8 6 5 11 11 H 1.48497 * 109.47175 * 95.32402 * 10 8 6 12 12 H 1.48499 * 109.46914 * 215.32144 * 10 8 6 13 13 H 1.48497 * 109.46996 * 335.32318 * 10 8 6 14 14 C 1.46502 * 119.99928 * 90.00653 * 5 4 3 15 15 C 1.50692 * 109.47674 * 85.77356 * 14 5 4 16 16 C 1.38190 * 119.61165 * 94.62980 * 15 14 5 17 17 C 1.38662 * 119.19667 * 180.02562 * 16 15 14 18 18 C 1.38612 * 118.43714 * 0.02562 * 17 16 15 19 19 C 1.38356 * 119.14781 * 359.97438 * 18 17 16 20 20 Cl 1.73595 * 119.63486 * 180.02562 * 19 18 17 21 21 N 1.31881 * 119.61262 * 274.36515 * 15 14 5 22 22 H 1.09000 * 109.46892 * 60.00501 * 1 2 3 23 23 H 1.08996 * 109.47149 * 180.02562 * 1 2 3 24 24 H 1.09007 * 109.47260 * 300.00607 * 1 2 3 25 25 H 1.08998 * 109.47460 * 59.99214 * 3 2 1 26 26 H 1.09004 * 109.46946 * 299.99580 * 3 2 1 27 27 H 1.08993 * 109.46872 * 305.00013 * 4 3 2 28 28 H 1.08993 * 109.47057 * 184.99473 * 4 3 2 29 29 H 0.97004 * 120.00124 * 179.97438 * 9 8 6 30 30 H 1.09001 * 109.47187 * 205.78060 * 14 5 4 31 31 H 1.08998 * 109.46886 * 325.76926 * 14 5 4 32 32 H 1.08004 * 120.40051 * 359.97438 * 16 15 14 33 33 H 1.07996 * 120.78691 * 180.02562 * 17 16 15 34 34 H 1.08000 * 120.43064 * 179.97438 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 7 3.9767 0.5639 -1.2508 6 6 4.0979 -0.7975 -1.3344 7 1 3.8253 -1.3090 -2.2456 8 6 4.5710 -1.5201 -0.2476 9 7 4.2986 -2.8035 -0.1419 10 14 5.5942 -0.6712 1.0645 11 1 4.7141 -0.2535 2.1852 12 1 6.6279 -1.6097 1.5702 13 1 6.2539 0.5244 0.4811 14 6 4.2884 1.3996 -2.4130 15 6 5.7189 1.8654 -2.3277 16 6 6.7090 1.1527 -2.9770 17 6 8.0225 1.5887 -2.8923 18 6 8.2928 2.7303 -2.1540 19 6 7.2500 3.3924 -1.5308 20 17 7.5740 4.8237 -0.6035 21 7 6.0107 2.9514 -1.6387 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3634 0.5140 0.8900 25 1 1.6885 1.8465 0.8899 26 1 1.6886 1.8464 -0.8901 27 1 3.8508 0.5686 0.8427 28 1 3.9785 2.1765 0.0901 29 1 4.6295 -3.3086 0.6173 30 1 4.1488 0.8199 -3.3254 31 1 3.6249 2.2643 -2.4271 32 1 6.4627 0.2663 -3.5428 33 1 8.8164 1.0516 -3.3899 34 1 9.3044 3.0982 -2.0662 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000839086438.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:01 Heat of formation + Delta-G solvation = 14.565759 kcal Electronic energy + Delta-G solvation = -18893.586857 eV Core-core repulsion = 15853.820382 eV Total energy + Delta-G solvation = -3039.766475 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.84930 -37.35832 -36.44912 -35.49519 -32.38730 -31.78896 -31.06869 -28.83643 -26.35772 -25.66348 -23.30005 -22.94611 -22.19132 -20.34992 -16.88675 -16.78195 -16.17279 -15.80896 -15.48736 -15.26897 -14.75767 -14.35596 -14.13546 -13.58431 -13.44813 -13.00001 -12.80503 -12.26544 -11.96072 -11.62255 -11.46349 -11.39297 -11.19101 -11.05212 -10.79544 -10.63220 -10.38000 -9.77561 -9.62511 -9.58323 -9.21021 -8.86641 -8.58449 -8.40709 -6.92443 -5.97445 -3.36754 1.31482 1.52954 2.06144 3.34177 3.47734 3.54355 3.99067 4.54385 4.61136 4.77018 5.02387 5.07199 5.28184 5.36135 5.45888 5.64359 5.73874 5.80666 5.91280 5.97768 6.03945 6.08838 6.15441 6.21650 6.35756 6.39929 6.46999 6.53325 6.76681 6.92212 7.94438 8.08490 8.21400 8.37576 8.92562 9.70725 10.06781 11.17501 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.018896 B = 0.006996 C = 0.006299 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1481.423251 B = 4001.612395 C = 4444.422479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.349 6.349 3 C 0.050 3.950 4 C 0.134 3.866 5 N -0.580 5.580 6 C -0.254 4.254 7 H 0.082 0.918 8 C 0.050 3.950 9 N -0.890 5.890 10 Si 0.871 3.129 11 H -0.285 1.285 12 H -0.303 1.303 13 H -0.271 1.271 14 C 0.188 3.812 15 C 0.144 3.856 16 C -0.152 4.152 17 C -0.068 4.068 18 C -0.179 4.179 19 C 0.174 3.826 20 Cl -0.055 7.055 21 N -0.479 5.479 22 H 0.030 0.970 23 H 0.078 0.922 24 H 0.025 0.975 25 H 0.030 0.970 26 H 0.039 0.961 27 H 0.059 0.941 28 H 0.064 0.936 29 H 0.262 0.738 30 H 0.079 0.921 31 H 0.059 0.941 32 H 0.143 0.857 33 H 0.137 0.863 34 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.763 10.895 -3.999 11.930 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.267 6.267 3 C -0.029 4.029 4 C 0.009 3.991 5 N -0.300 5.300 6 C -0.383 4.383 7 H 0.099 0.901 8 C -0.152 4.152 9 N -0.530 5.530 10 Si 0.701 3.299 11 H -0.213 1.213 12 H -0.231 1.231 13 H -0.196 1.196 14 C 0.061 3.939 15 C 0.004 3.996 16 C -0.173 4.173 17 C -0.094 4.094 18 C -0.201 4.201 19 C 0.009 3.991 20 Cl -0.026 7.026 21 N -0.191 5.191 22 H 0.048 0.952 23 H 0.096 0.904 24 H 0.044 0.956 25 H 0.048 0.952 26 H 0.057 0.943 27 H 0.077 0.923 28 H 0.082 0.918 29 H 0.072 0.928 30 H 0.097 0.903 31 H 0.077 0.923 32 H 0.161 0.839 33 H 0.155 0.845 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.207 11.102 -3.411 11.822 hybrid contribution 1.251 0.305 0.797 1.514 sum 3.458 11.407 -2.615 12.203 Atomic orbital electron populations 1.22640 0.83788 1.01833 0.98309 1.88296 1.16941 1.26592 1.94822 1.23171 0.96934 0.85012 0.97824 1.21314 0.90485 0.97226 0.90119 1.44179 1.73653 1.03294 1.08865 1.18687 1.38061 0.79280 1.02239 0.90077 1.25350 0.97372 0.94759 0.97717 1.69849 1.44767 1.07837 1.30544 0.87036 0.80911 0.79382 0.82524 1.21306 1.23121 1.19558 1.20164 0.86410 0.94445 0.92850 1.22832 1.00469 0.87208 0.89106 1.22122 0.92987 1.01100 1.01101 1.21524 0.97207 0.94499 0.96141 1.21594 0.99239 0.97815 1.01408 1.21562 0.91018 0.90754 0.95752 1.98362 1.94478 1.37372 1.72431 1.66847 1.19935 1.14872 1.17450 0.95174 0.90351 0.95616 0.95211 0.94254 0.92316 0.91751 0.92789 0.90316 0.92285 0.83946 0.84485 0.84779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.53 11.01 101.05 1.11 1.65 16 2 O -0.35 -7.78 10.18 -35.23 -0.36 -8.14 16 3 C 0.05 0.99 6.28 37.16 0.23 1.22 16 4 C 0.13 2.99 4.95 -4.04 -0.02 2.97 16 5 N -0.58 -13.36 2.05 -174.62 -0.36 -13.72 16 6 C -0.25 -6.82 9.41 -15.06 -0.14 -6.96 16 7 H 0.08 2.32 8.06 -52.49 -0.42 1.90 16 8 C 0.05 1.42 5.31 -17.43 -0.09 1.33 16 9 N -0.89 -26.93 13.97 55.49 0.78 -26.16 16 10 Si 0.87 22.85 25.00 -169.99 -4.25 18.60 16 11 H -0.28 -7.44 6.67 56.52 0.38 -7.07 16 12 H -0.30 -8.07 7.11 56.52 0.40 -7.67 16 13 H -0.27 -7.15 7.11 56.52 0.40 -6.75 16 14 C 0.19 3.60 5.98 -5.20 -0.03 3.57 16 15 C 0.14 2.72 6.36 -82.59 -0.53 2.20 16 16 C -0.15 -2.56 9.72 -39.44 -0.38 -2.95 16 17 C -0.07 -0.99 10.17 -39.29 -0.40 -1.39 16 18 C -0.18 -2.66 9.88 -39.40 -0.39 -3.05 16 19 C 0.17 2.99 7.27 -17.45 -0.13 2.86 16 20 Cl -0.05 -0.82 29.11 -51.86 -1.51 -2.33 16 21 N -0.48 -9.19 10.25 -6.62 -0.07 -9.25 16 22 H 0.03 0.45 8.14 -51.93 -0.42 0.03 16 23 H 0.08 1.25 8.14 -51.93 -0.42 0.83 16 24 H 0.03 0.38 8.14 -51.93 -0.42 -0.05 16 25 H 0.03 0.52 8.14 -51.93 -0.42 0.10 16 26 H 0.04 0.72 8.14 -51.93 -0.42 0.29 16 27 H 0.06 1.47 3.21 -51.93 -0.17 1.31 16 28 H 0.06 1.35 8.07 -51.93 -0.42 0.93 16 29 H 0.26 7.61 8.31 -40.82 -0.34 7.27 16 30 H 0.08 1.40 7.91 -51.93 -0.41 0.99 16 31 H 0.06 1.04 8.10 -51.93 -0.42 0.62 16 32 H 0.14 2.22 8.06 -52.48 -0.42 1.80 16 33 H 0.14 1.52 8.06 -52.49 -0.42 1.09 16 34 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 LS Contribution 306.32 15.07 4.62 4.62 Total: -1.00 -31.83 306.32 -6.30 -38.13 By element: Atomic # 1 Polarization: 1.18 SS G_CDS: -4.38 Total: -3.21 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: -0.76 Total: 1.45 kcal Atomic # 7 Polarization: -49.48 SS G_CDS: 0.35 Total: -49.13 kcal Atomic # 8 Polarization: -7.78 SS G_CDS: -0.36 Total: -8.14 kcal Atomic # 14 Polarization: 22.85 SS G_CDS: -4.25 Total: 18.60 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.51 Total: -2.33 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -31.83 -6.30 -38.13 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000839086438.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.696 kcal (2) G-P(sol) polarization free energy of solvation -31.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.130 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds