Wall clock time and date at job start Mon Mar 30 2020 01:42:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52998 * 109.47601 * 2 1 4 4 C 1.50699 * 109.47118 * 239.99603 * 2 1 3 5 5 H 1.08003 * 119.99860 * 241.34908 * 4 2 1 6 6 C 1.37872 * 119.99986 * 61.35273 * 4 2 1 7 7 N 1.31520 * 120.00004 * 193.97484 * 6 4 2 8 8 Si 1.86795 * 119.99988 * 13.97237 * 6 4 2 9 9 H 1.48502 * 109.46990 * 84.55326 * 8 6 4 10 10 H 1.48505 * 109.47035 * 204.55142 * 8 6 4 11 11 H 1.48502 * 109.47491 * 324.55254 * 8 6 4 12 12 C 1.53008 * 109.47141 * 119.99615 * 2 1 3 13 13 N 1.46497 * 109.46852 * 300.00366 * 12 2 1 14 14 C 1.38552 * 119.99563 * 180.02562 * 13 12 2 15 15 C 1.39588 * 120.47687 * 359.97438 * 14 13 12 16 16 C 1.38292 * 118.47530 * 180.02562 * 15 14 13 17 17 Cl 1.73600 * 120.36910 * 179.97438 * 16 15 14 18 18 N 1.32631 * 119.25955 * 0.02562 * 16 15 14 19 19 C 1.32458 * 120.90892 * 359.97438 * 18 16 15 20 20 N 1.38399 * 119.17025 * 179.97438 * 19 18 16 21 21 N 1.32464 * 121.66429 * 359.71883 * 19 18 16 22 22 H 1.09005 * 109.46891 * 309.37303 * 1 2 3 23 23 H 1.08994 * 109.46676 * 69.36975 * 1 2 3 24 24 H 1.08993 * 109.47067 * 189.36852 * 1 2 3 25 25 H 1.08997 * 109.47412 * 179.97438 * 3 2 1 26 26 H 1.09005 * 109.46555 * 300.00019 * 3 2 1 27 27 H 1.09000 * 109.47290 * 59.99329 * 3 2 1 28 28 H 0.96996 * 119.99991 * 179.97438 * 7 6 4 29 29 H 1.08996 * 109.47148 * 179.97438 * 12 2 1 30 30 H 1.09004 * 109.46527 * 59.99701 * 12 2 1 31 31 H 0.96990 * 120.00300 * 359.97438 * 13 12 2 32 32 H 1.07994 * 120.76264 * 359.97438 * 15 14 13 33 33 H 0.97004 * 119.99792 * 0.02562 * 20 19 18 34 34 H 0.96995 * 120.00210 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0323 -0.7105 -1.2304 5 1 2.6351 -1.6011 -1.1314 6 6 1.7224 -0.2235 -2.4825 7 7 1.9159 -0.9727 -3.5459 8 14 1.0277 1.5005 -2.6684 9 1 2.1419 2.4815 -2.7084 10 1 0.2471 1.5863 -3.9288 11 1 0.1419 1.8043 -1.5159 12 6 2.0400 -0.7212 1.2493 13 7 1.5516 -0.0305 2.4454 14 6 1.8868 -0.5035 3.7038 15 6 2.6887 -1.6375 3.8435 16 6 2.9973 -2.0738 5.1190 17 17 3.9902 -3.4790 5.3497 18 7 2.5253 -1.4073 6.1640 19 6 1.7663 -0.3341 6.0003 20 7 1.2927 0.3337 7.1162 21 7 1.4533 0.1190 4.7956 22 1 -0.3633 0.6520 0.7945 23 1 -0.3632 0.3621 -0.9617 24 1 -0.3633 -1.0139 0.1673 25 1 3.1301 1.4424 0.0005 26 1 1.6767 1.9562 -0.8901 27 1 1.6767 1.9564 0.8899 28 1 1.6975 -0.6303 -4.4267 29 1 3.1300 -0.7216 1.2491 30 1 1.6766 -1.7489 1.2493 31 1 0.9942 0.7582 2.3564 32 1 3.0590 -2.1625 2.9754 33 1 1.5178 0.0147 8.0042 34 1 0.7357 1.1207 7.0103 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000840335611.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:42:27 Heat of formation + Delta-G solvation = 61.314245 kcal Electronic energy + Delta-G solvation = -18379.063850 eV Core-core repulsion = 15373.617293 eV Total energy + Delta-G solvation = -3005.446557 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.094 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.76094 -37.78769 -36.81301 -35.31568 -34.01061 -32.39009 -31.35545 -29.45297 -26.48226 -26.14252 -24.96663 -23.72769 -22.45719 -19.40051 -18.42364 -17.95319 -16.28655 -15.99174 -15.69701 -15.34219 -15.23486 -14.94373 -14.38839 -14.04055 -13.96637 -13.01821 -12.76342 -12.51435 -12.27221 -12.14129 -12.02009 -11.37766 -10.97240 -10.82560 -10.48760 -10.35818 -10.24924 -10.20329 -10.10857 -9.22335 -9.15356 -8.76774 -8.62121 -8.53814 -7.82424 -6.22533 -4.20899 1.20015 1.57011 1.69143 3.03066 3.19747 3.27420 3.34738 3.54450 4.01733 4.29342 4.78107 4.93560 5.08437 5.45881 5.49080 5.58807 5.86087 5.94801 5.99303 6.25539 6.30542 6.42409 6.49188 6.60583 6.68881 6.82135 7.07437 7.09889 7.25157 7.31539 7.42247 7.63505 7.85675 8.34654 8.50363 8.80762 9.41174 10.90174 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.027479 B = 0.004682 C = 0.004124 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1018.722846 B = 5979.185152 C = 6788.524071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.031 3.969 3 C -0.149 4.149 4 C -0.516 4.516 5 H 0.078 0.922 6 C 0.078 3.922 7 N -0.888 5.888 8 Si 0.884 3.116 9 H -0.285 1.285 10 H -0.304 1.304 11 H -0.249 1.249 12 C 0.140 3.860 13 N -0.691 5.691 14 C 0.490 3.510 15 C -0.324 4.324 16 C 0.288 3.712 17 Cl -0.027 7.027 18 N -0.616 5.616 19 C 0.619 3.381 20 N -0.822 5.822 21 N -0.630 5.630 22 H 0.023 0.977 23 H 0.057 0.943 24 H 0.048 0.952 25 H 0.054 0.946 26 H 0.043 0.957 27 H 0.031 0.969 28 H 0.266 0.734 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.407 0.593 32 H 0.152 0.848 33 H 0.413 0.587 34 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.444 1.506 16.966 17.038 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C 0.030 3.970 3 C -0.206 4.206 4 C -0.554 4.554 5 H 0.096 0.904 6 C -0.125 4.125 7 N -0.525 5.525 8 Si 0.716 3.284 9 H -0.213 1.213 10 H -0.233 1.233 11 H -0.175 1.175 12 C 0.018 3.982 13 N -0.320 5.320 14 C 0.241 3.759 15 C -0.356 4.356 16 C 0.118 3.882 17 Cl 0.002 6.998 18 N -0.348 5.348 19 C 0.258 3.742 20 N -0.372 5.372 21 N -0.366 5.366 22 H 0.042 0.958 23 H 0.076 0.924 24 H 0.067 0.933 25 H 0.073 0.927 26 H 0.061 0.939 27 H 0.050 0.950 28 H 0.076 0.924 29 H 0.084 0.916 30 H 0.085 0.915 31 H 0.245 0.755 32 H 0.169 0.831 33 H 0.244 0.756 34 H 0.245 0.755 Dipole moment (debyes) X Y Z Total from point charges -0.592 1.682 17.309 17.400 hybrid contribution -0.240 0.888 -0.681 1.144 sum -0.832 2.570 16.628 16.846 Atomic orbital electron populations 1.22305 0.97650 0.99969 1.00174 1.18698 0.92693 0.92352 0.93260 1.22370 1.01222 0.98219 0.98814 1.20652 1.34453 1.12412 0.87874 0.90424 1.24945 0.94540 0.97259 0.95777 1.69939 1.47837 1.35907 0.98788 0.87313 0.79419 0.85511 0.76115 1.21287 1.23307 1.17514 1.21795 0.98631 0.96008 0.81813 1.45114 1.53433 1.31936 1.01534 1.18072 0.85457 0.86521 0.85850 1.21559 1.12381 1.03732 0.97948 1.21072 0.89935 0.88441 0.88741 1.98405 1.66653 1.37112 1.97675 1.67048 1.21049 1.12111 1.34592 1.18526 0.85378 0.84696 0.85620 1.41633 1.57690 1.33038 1.04799 1.67313 1.34992 1.37213 0.97119 0.95795 0.92404 0.93321 0.92699 0.93914 0.95027 0.92445 0.91568 0.91465 0.75518 0.83056 0.75614 0.75537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.82 7.53 37.16 0.28 -2.54 16 2 C 0.03 0.64 0.50 -155.66 -0.08 0.56 16 3 C -0.15 -2.92 7.52 37.16 0.28 -2.64 16 4 C -0.52 -13.05 8.62 -34.44 -0.30 -13.35 16 5 H 0.08 2.13 7.99 -52.48 -0.42 1.71 16 6 C 0.08 2.09 5.32 -17.82 -0.09 1.99 16 7 N -0.89 -25.68 13.96 55.43 0.77 -24.91 16 8 Si 0.88 20.53 22.79 -169.99 -3.87 16.66 16 9 H -0.29 -6.63 7.10 56.52 0.40 -6.23 16 10 H -0.30 -7.28 7.11 56.52 0.40 -6.87 16 11 H -0.25 -5.30 4.65 56.52 0.26 -5.03 16 12 C 0.14 2.45 3.74 -4.04 -0.02 2.44 16 13 N -0.69 -10.93 5.16 -60.29 -0.31 -11.24 16 14 C 0.49 7.79 7.70 -154.82 -1.19 6.60 16 15 C -0.32 -4.94 9.19 -39.06 -0.36 -5.30 16 16 C 0.29 4.29 7.32 -17.19 -0.13 4.17 16 17 Cl -0.03 -0.35 29.15 -51.86 -1.51 -1.86 16 18 N -0.62 -9.25 10.45 -11.11 -0.12 -9.37 16 19 C 0.62 8.81 8.67 -322.90 -2.80 6.01 16 20 N -0.82 -7.98 9.07 29.75 0.27 -7.71 16 21 N -0.63 -9.76 10.49 -13.17 -0.14 -9.90 16 22 H 0.02 0.40 7.13 -51.93 -0.37 0.03 16 23 H 0.06 1.22 4.30 -51.93 -0.22 1.00 16 24 H 0.05 0.94 8.12 -51.93 -0.42 0.51 16 25 H 0.05 1.06 8.14 -51.93 -0.42 0.64 16 26 H 0.04 0.89 2.25 -51.93 -0.12 0.78 16 27 H 0.03 0.53 6.86 -51.93 -0.36 0.17 16 28 H 0.27 7.27 8.31 -40.82 -0.34 6.93 16 29 H 0.07 1.15 7.97 -51.93 -0.41 0.74 16 30 H 0.07 1.18 7.97 -51.93 -0.41 0.77 16 31 H 0.41 6.30 6.38 -40.82 -0.26 6.04 16 32 H 0.15 2.18 6.85 -52.49 -0.36 1.83 16 33 H 0.41 3.15 8.94 -40.82 -0.37 2.78 16 34 H 0.41 3.25 8.94 -40.82 -0.37 2.88 16 LS Contribution 286.20 15.07 4.31 4.31 Total: -1.00 -28.63 286.20 -8.78 -37.41 By element: Atomic # 1 Polarization: 12.45 SS G_CDS: -3.78 Total: 8.67 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -4.40 Total: -2.06 kcal Atomic # 7 Polarization: -63.61 SS G_CDS: 0.48 Total: -63.13 kcal Atomic # 14 Polarization: 20.53 SS G_CDS: -3.87 Total: 16.66 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.51 Total: -1.86 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -28.63 -8.78 -37.41 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000840335611.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.722 kcal (2) G-P(sol) polarization free energy of solvation -28.629 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.779 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.408 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds