Wall clock time and date at job start Mon Mar 30 2020 00:47:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 N 1.46504 * 109.46504 * 193.29776 * 3 2 1 5 5 C 1.37097 * 120.00294 * 264.22872 * 4 3 2 6 6 H 1.07996 * 120.00419 * 197.72402 * 5 4 3 7 7 C 1.38957 * 119.99677 * 17.72885 * 5 4 3 8 8 N 1.31415 * 119.99955 * 21.39466 * 7 5 4 9 9 Si 1.86794 * 119.99866 * 201.39635 * 7 5 4 10 10 H 1.48498 * 109.47457 * 89.99761 * 9 7 5 11 11 H 1.48502 * 109.47082 * 209.99787 * 9 7 5 12 12 H 1.48501 * 109.47107 * 329.99751 * 9 7 5 13 13 C 1.34773 * 119.99823 * 84.23623 * 4 3 2 14 14 O 1.21295 * 120.00387 * 179.97438 * 13 4 3 15 15 C 1.50702 * 120.00228 * 359.97438 * 13 4 3 16 16 C 1.50700 * 109.47360 * 180.02562 * 15 13 4 17 17 C 1.38702 * 120.30656 * 269.97748 * 16 15 13 18 18 C 1.38496 * 118.50567 * 180.02562 * 17 16 15 19 19 C 1.39458 * 119.04799 * 0.02562 * 18 17 16 20 20 C 1.43204 * 119.73629 * 180.02562 * 19 18 17 21 21 N 9.85919 * 104.67024 * 245.92302 * 2 1 3 22 22 N 1.32786 * 120.53067 * 359.97438 * 19 18 17 23 23 C 1.31592 * 121.62016 * 359.97438 * 22 19 18 24 24 H 1.08998 * 109.47304 * 73.30445 * 3 2 1 25 25 H 1.08998 * 109.47582 * 313.30002 * 3 2 1 26 26 H 0.97001 * 119.99882 * 180.02562 * 8 7 5 27 27 H 1.09000 * 109.47156 * 59.99872 * 15 13 4 28 28 H 1.09001 * 109.46931 * 300.00069 * 15 13 4 29 29 H 1.07994 * 120.74937 * 0.04409 * 17 16 15 30 30 H 1.07997 * 120.47569 * 180.02562 * 18 17 16 31 31 H 1.08003 * 119.54807 * 180.02562 * 23 22 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0956 1.3451 0.3177 5 6 3.4362 2.2073 -0.6923 6 1 4.0521 3.0692 -0.4820 7 6 2.9889 1.9723 -1.9868 8 7 1.9359 1.2128 -2.1903 9 14 3.8844 2.7358 -3.4374 10 1 4.9496 1.8121 -3.9035 11 1 2.9215 2.9782 -4.5416 12 1 4.4940 4.0241 -3.0205 13 6 3.2094 1.7344 1.6030 14 8 3.6136 2.8473 1.8662 15 6 2.8346 0.7869 2.7133 16 6 3.0517 1.4608 4.0436 17 6 4.2758 1.3598 4.6879 18 6 4.4342 1.9935 5.9092 19 6 3.3628 2.7069 6.4459 20 6 3.5106 3.3682 7.7075 21 7 3.6329 3.8911 8.7080 22 7 2.2071 2.7786 5.7961 23 6 2.0310 2.1866 4.6341 24 1 2.9715 -0.2944 -0.9843 25 1 2.9717 -0.7039 0.7479 26 1 1.6239 1.0485 -3.0940 27 1 3.4552 -0.1072 2.6530 28 1 1.7855 0.5082 2.6145 29 1 5.0873 0.7999 4.2471 30 1 5.3740 1.9361 6.4383 31 1 1.0769 2.2672 4.1344 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001118816335.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:47:13 Heat of formation + Delta-G solvation = 73.703833 kcal Electronic energy + Delta-G solvation = -19062.133602 eV Core-core repulsion = 15923.824052 eV Total energy + Delta-G solvation = -3138.309549 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.49329 -38.88035 -36.64865 -35.92001 -34.51515 -33.45397 -32.19060 -31.88947 -28.59343 -27.50108 -25.05325 -23.89518 -23.04526 -19.53615 -19.34342 -18.05154 -16.88560 -16.63493 -16.32698 -15.42198 -14.88249 -14.83696 -14.54642 -14.17387 -13.96496 -13.33103 -13.17323 -13.10066 -13.05985 -12.82248 -12.55053 -12.33480 -11.88634 -11.82806 -11.54479 -11.38514 -11.20067 -10.67459 -10.47698 -10.42645 -9.91709 -9.66705 -9.37340 -9.12522 -8.66710 -8.17180 -6.61513 -4.11282 0.56190 1.20151 2.46424 2.78445 3.02217 3.16800 3.20374 3.41334 3.48714 3.65456 3.85845 3.86762 4.04598 4.54820 4.63329 4.75202 4.81695 4.89145 4.94296 5.06687 5.13614 5.38593 5.54121 5.66510 5.79500 5.85493 5.96573 6.21919 6.39046 6.50512 7.27810 7.37331 7.73061 7.76492 8.15289 8.62513 8.87909 9.06733 9.58304 10.44379 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.028791 B = 0.004456 C = 0.004103 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 972.305615 B = 6281.908547 C = 6822.318893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.469 5.469 2 C 0.243 3.757 3 C 0.219 3.781 4 N -0.439 5.439 5 C -0.316 4.316 6 H 0.110 0.890 7 C 0.034 3.966 8 N -0.875 5.875 9 Si 0.928 3.072 10 H -0.275 1.275 11 H -0.285 1.285 12 H -0.269 1.269 13 C 0.455 3.545 14 O -0.566 6.566 15 C -0.105 4.105 16 C -0.064 4.064 17 C -0.063 4.063 18 C -0.116 4.116 19 C 0.170 3.830 20 C 0.277 3.723 21 N -0.406 5.406 22 N -0.450 5.450 23 C 0.121 3.879 24 H 0.128 0.872 25 H 0.085 0.915 26 H 0.274 0.726 27 H 0.101 0.899 28 H 0.097 0.903 29 H 0.147 0.853 30 H 0.143 0.857 31 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.685 -6.966 7.135 11.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.149 5.149 2 C -0.076 4.076 3 C 0.092 3.908 4 N -0.160 5.160 5 C -0.442 4.442 6 H 0.127 0.873 7 C -0.170 4.170 8 N -0.514 5.514 9 Si 0.754 3.246 10 H -0.201 1.201 11 H -0.211 1.211 12 H -0.193 1.193 13 C 0.243 3.757 14 O -0.448 6.448 15 C -0.146 4.146 16 C -0.067 4.067 17 C -0.089 4.089 18 C -0.138 4.138 19 C 0.032 3.968 20 C -0.040 4.040 21 N -0.083 5.083 22 N -0.160 5.160 23 C -0.038 4.038 24 H 0.146 0.854 25 H 0.103 0.897 26 H 0.085 0.915 27 H 0.119 0.881 28 H 0.115 0.885 29 H 0.164 0.836 30 H 0.161 0.839 31 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 3.610 -5.166 9.007 10.993 hybrid contribution 1.183 -0.302 -1.887 2.247 sum 4.793 -5.468 7.120 10.177 Atomic orbital electron populations 1.80928 1.13564 1.08815 1.11570 1.29298 0.95354 0.92225 0.90693 1.18775 0.81662 0.86098 1.04299 1.43638 1.56356 1.11258 1.04705 1.19739 1.30169 1.08760 0.85564 0.87263 1.25284 0.94896 0.97532 0.99322 1.69850 1.19704 1.38754 1.23062 0.85889 0.79027 0.79648 0.80033 1.20073 1.21068 1.19300 1.19827 0.84690 0.88054 0.83089 1.90599 1.50025 1.21566 1.82649 1.20762 1.04179 0.99064 0.90619 1.20708 0.94324 0.96142 0.95563 1.21429 0.96890 0.97323 0.93273 1.21913 0.98802 0.96685 0.96418 1.16301 0.91852 0.98679 0.89967 1.25065 0.93427 0.93300 0.92194 1.81193 1.07611 1.08311 1.11149 1.67520 1.22099 1.17685 1.08666 1.22636 0.99591 0.91815 0.89794 0.85387 0.89673 0.91493 0.88105 0.88483 0.83575 0.83910 0.81749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -10.17 18.54 42.15 0.78 -9.39 16 2 C 0.24 4.77 12.95 -20.76 -0.27 4.50 16 3 C 0.22 3.74 4.91 -6.83 -0.03 3.71 16 4 N -0.44 -9.05 2.60 -117.93 -0.31 -9.36 16 5 C -0.32 -7.49 9.32 -14.93 -0.14 -7.63 16 6 H 0.11 2.78 7.39 -52.49 -0.39 2.39 16 7 C 0.03 0.78 4.87 -17.46 -0.08 0.69 16 8 N -0.88 -20.63 9.48 55.50 0.53 -20.11 16 9 Si 0.93 18.55 29.60 -169.99 -5.03 13.52 16 10 H -0.27 -5.32 7.11 56.52 0.40 -4.91 16 11 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 12 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 13 C 0.46 8.83 7.56 -10.99 -0.08 8.75 16 14 O -0.57 -13.24 15.68 5.54 0.09 -13.15 16 15 C -0.11 -1.41 4.46 -29.03 -0.13 -1.54 16 16 C -0.06 -0.84 4.40 -104.37 -0.46 -1.30 16 17 C -0.06 -0.70 9.85 -39.31 -0.39 -1.09 16 18 C -0.12 -1.22 9.80 -39.03 -0.38 -1.61 16 19 C 0.17 2.22 6.58 -85.07 -0.56 1.66 16 20 C 0.28 3.76 15.53 -22.49 -0.35 3.41 16 21 N -0.41 -6.04 18.53 41.82 0.78 -5.26 16 22 N -0.45 -6.62 10.28 -11.16 -0.11 -6.73 16 23 C 0.12 1.70 10.85 -17.57 -0.19 1.51 16 24 H 0.13 2.29 6.46 -51.93 -0.34 1.96 16 25 H 0.09 1.00 6.68 -51.93 -0.35 0.65 16 26 H 0.27 6.33 8.31 -40.82 -0.34 5.99 16 27 H 0.10 0.98 7.37 -51.93 -0.38 0.60 16 28 H 0.10 1.24 7.46 -51.93 -0.39 0.86 16 29 H 0.15 1.23 8.06 -52.49 -0.42 0.80 16 30 H 0.14 1.07 8.06 -52.49 -0.42 0.65 16 31 H 0.17 2.14 8.06 -52.48 -0.42 1.72 16 LS Contribution 294.94 15.07 4.44 4.44 Total: -1.00 -30.65 294.94 -4.15 -34.80 By element: Atomic # 1 Polarization: 2.40 SS G_CDS: -2.24 Total: 0.16 kcal Atomic # 6 Polarization: 14.14 SS G_CDS: -3.07 Total: 11.08 kcal Atomic # 7 Polarization: -52.51 SS G_CDS: 1.66 Total: -50.85 kcal Atomic # 8 Polarization: -13.24 SS G_CDS: 0.09 Total: -13.15 kcal Atomic # 14 Polarization: 18.55 SS G_CDS: -5.03 Total: 13.52 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -30.65 -4.15 -34.80 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001118816335.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.504 kcal (2) G-P(sol) polarization free energy of solvation -30.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.150 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.800 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds