Wall clock time and date at job start Mon Mar 30 2020 01:24:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35739 * 116.99692 * 2 1 4 4 C 1.39213 * 120.84145 * 0.02562 * 3 2 1 5 5 C 1.38127 * 119.07994 * 179.97438 * 4 3 2 6 6 Cl 1.73605 * 119.60132 * 179.97438 * 5 4 3 7 7 N 1.32061 * 120.79350 * 0.02562 * 5 4 3 8 8 C 1.31973 * 121.84242 * 359.65454 * 7 5 4 9 9 C 1.37954 * 120.83677 * 0.63310 * 8 7 5 10 10 C 1.50708 * 120.43930 * 179.68178 * 9 8 7 11 11 N 1.46902 * 109.46760 * 259.72437 * 10 9 8 12 12 C 1.46898 * 111.00283 * 293.95026 * 11 10 9 13 13 C 1.46906 * 110.99573 * 169.99885 * 11 10 9 14 14 C 1.50706 * 109.46929 * 190.00042 * 13 11 10 15 15 H 1.07998 * 119.99628 * 0.02562 * 14 13 11 16 16 C 1.37871 * 119.99847 * 179.97438 * 14 13 11 17 17 N 1.31523 * 120.00067 * 0.02562 * 16 14 13 18 18 Si 1.86794 * 119.99964 * 179.97438 * 16 14 13 19 19 H 1.48507 * 109.46747 * 90.00527 * 18 16 14 20 20 H 1.48504 * 109.47496 * 210.00106 * 18 16 14 21 21 H 1.48500 * 109.47352 * 330.00459 * 18 16 14 22 22 H 1.09001 * 109.47113 * 180.02562 * 1 2 3 23 23 H 1.09005 * 109.47106 * 300.00467 * 1 2 3 24 24 H 1.08999 * 109.47159 * 59.99778 * 1 2 3 25 25 H 1.08001 * 120.46454 * 359.97438 * 4 3 2 26 26 H 1.08008 * 119.58097 * 180.33881 * 8 7 5 27 27 H 1.08993 * 109.46930 * 139.72686 * 10 9 8 28 28 H 1.09000 * 109.47035 * 19.72026 * 10 9 8 29 29 H 1.08997 * 109.47334 * 296.05250 * 12 11 10 30 30 H 1.09000 * 109.46674 * 56.05127 * 12 11 10 31 31 H 1.08995 * 109.47296 * 176.04950 * 12 11 10 32 32 H 1.08998 * 109.47121 * 309.99709 * 13 11 10 33 33 H 1.09000 * 109.47141 * 69.99907 * 13 11 10 34 34 H 0.96995 * 119.99723 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2095 0.0000 4 6 1.3042 2.3880 0.0005 5 6 1.9687 3.5989 0.0011 6 17 1.0580 5.0769 0.0011 7 7 3.2885 3.6458 0.0005 8 6 4.0241 2.5501 0.0063 9 6 3.4349 1.3027 0.0000 10 6 4.2837 0.0574 -0.0006 11 7 4.3607 -0.4820 -1.3648 12 6 3.0461 -0.9549 -1.8189 13 6 5.3639 -1.5516 -1.4521 14 6 5.5917 -1.9099 -2.8981 15 1 5.0461 -1.3942 -3.6745 16 6 6.4973 -2.8951 -3.2298 17 7 7.1620 -3.5226 -2.2842 18 14 6.7791 -3.3397 -5.0221 19 1 7.8698 -2.4973 -5.5754 20 1 7.1598 -4.7715 -5.1230 21 1 5.5318 -3.1036 -5.7927 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3633 0.5139 -0.8900 25 1 0.2246 2.3560 0.0005 26 1 5.1012 2.6311 0.0112 27 1 3.8378 -0.6864 0.6596 28 1 5.2863 0.3009 0.3509 29 1 2.7240 -1.7880 -1.1943 30 1 2.3223 -0.1433 -1.7439 31 1 3.1167 -1.2841 -2.8556 32 1 6.2998 -1.2088 -1.0110 33 1 5.0076 -2.4289 -0.9122 34 1 7.7994 -4.2155 -2.5177 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001141332232.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:24:53 Heat of formation + Delta-G solvation = 1.555562 kcal Electronic energy + Delta-G solvation = -18477.101217 eV Core-core repulsion = 15436.770578 eV Total energy + Delta-G solvation = -3040.330639 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.91448 -38.40123 -36.87268 -36.36408 -32.87242 -31.62868 -31.31068 -27.89030 -27.28263 -26.53940 -24.20064 -23.08774 -21.97713 -20.20283 -18.52712 -17.42339 -16.49367 -16.25393 -15.47782 -15.31234 -14.73920 -14.49552 -14.29022 -14.04003 -13.83676 -13.72414 -12.77225 -12.27259 -12.00045 -11.90892 -11.65161 -11.48342 -11.42348 -11.26944 -10.98785 -10.76367 -10.64798 -10.32821 -9.90320 -9.70032 -9.23190 -9.18849 -8.68686 -8.41959 -7.24171 -6.02573 -4.03604 0.88764 1.20592 1.70864 3.00692 3.32661 3.38497 3.42094 3.60174 4.40502 4.43521 4.56080 4.84578 4.87204 4.95736 5.14840 5.21388 5.30069 5.33258 5.35301 5.46268 5.74082 6.06639 6.16479 6.27137 6.41797 6.49982 6.83001 7.03609 7.26842 7.34061 7.74382 7.79643 8.06825 8.19206 8.53665 9.03926 9.60529 11.08350 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.028653 B = 0.004275 C = 0.004073 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 976.972159 B = 6548.620448 C = 6872.261862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.291 6.291 3 C 0.184 3.816 4 C -0.247 4.247 5 C 0.203 3.797 6 Cl -0.040 7.040 7 N -0.501 5.501 8 C 0.163 3.837 9 C -0.137 4.137 10 C 0.101 3.899 11 N -0.535 5.535 12 C 0.041 3.959 13 C 0.193 3.807 14 C -0.506 4.506 15 H 0.063 0.937 16 C 0.055 3.945 17 N -0.899 5.899 18 Si 0.898 3.102 19 H -0.280 1.280 20 H -0.287 1.287 21 H -0.274 1.274 22 H 0.105 0.895 23 H 0.057 0.943 24 H 0.059 0.941 25 H 0.145 0.855 26 H 0.174 0.826 27 H 0.040 0.960 28 H 0.082 0.918 29 H 0.015 0.985 30 H 0.049 0.951 31 H 0.066 0.934 32 H 0.031 0.969 33 H -0.008 1.008 34 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.930 10.607 6.936 18.833 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.201 6.201 3 C 0.130 3.870 4 C -0.269 4.269 5 C 0.038 3.962 6 Cl -0.011 7.011 7 N -0.215 5.215 8 C 0.007 3.993 9 C -0.141 4.141 10 C -0.028 4.028 11 N -0.259 5.259 12 C -0.108 4.108 13 C 0.068 3.932 14 C -0.544 4.544 15 H 0.081 0.919 16 C -0.146 4.146 17 N -0.539 5.539 18 Si 0.726 3.274 19 H -0.206 1.206 20 H -0.213 1.213 21 H -0.199 1.199 22 H 0.123 0.877 23 H 0.075 0.925 24 H 0.078 0.922 25 H 0.163 0.837 26 H 0.191 0.809 27 H 0.058 0.942 28 H 0.101 0.899 29 H 0.034 0.966 30 H 0.068 0.932 31 H 0.085 0.915 32 H 0.049 0.951 33 H 0.010 0.990 34 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -13.248 11.526 6.643 18.774 hybrid contribution -0.822 -1.491 -0.445 1.760 sum -14.070 10.034 6.198 18.359 Atomic orbital electron populations 1.23171 0.78278 1.04578 1.01508 1.86377 1.21493 1.25219 1.87022 1.18993 0.91916 0.84281 0.91816 1.21730 1.01595 0.90966 1.12645 1.21193 0.89856 0.86662 0.98517 1.98387 1.71221 1.35019 1.96521 1.67060 1.05149 1.33222 1.16092 1.22488 1.00067 0.84889 0.91821 1.20602 0.91055 0.98329 1.04069 1.20821 0.97801 0.91468 0.92702 1.62237 1.07690 1.37591 1.18407 1.22349 0.90166 0.97505 1.00744 1.19761 0.89376 0.86513 0.97556 1.21146 1.22720 1.18492 0.92060 0.91917 1.24976 0.95887 0.96172 0.97546 1.69959 1.26671 1.25132 1.32137 0.86502 0.78551 0.77415 0.84960 1.20597 1.21339 1.19914 0.87686 0.92487 0.92214 0.83708 0.80866 0.94155 0.89924 0.96610 0.93202 0.91500 0.95116 0.99004 0.92936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.17 9.84 101.05 0.99 1.16 16 2 O -0.29 -3.88 6.86 -18.93 -0.13 -4.01 16 3 C 0.18 2.59 5.45 -38.83 -0.21 2.38 16 4 C -0.25 -3.06 8.87 -39.26 -0.35 -3.41 16 5 C 0.20 2.76 7.27 -17.49 -0.13 2.63 16 6 Cl -0.04 -0.46 29.10 -51.86 -1.51 -1.97 16 7 N -0.50 -7.50 10.34 -10.43 -0.11 -7.61 16 8 C 0.16 2.36 10.82 -17.60 -0.19 2.17 16 9 C -0.14 -2.12 5.18 -104.33 -0.54 -2.66 16 10 C 0.10 1.78 5.01 -4.97 -0.02 1.75 16 11 N -0.53 -11.48 4.74 -245.82 -1.17 -12.65 16 12 C 0.04 0.81 7.94 60.06 0.48 1.29 16 13 C 0.19 4.97 4.72 -4.97 -0.02 4.94 16 14 C -0.51 -14.16 8.51 -34.44 -0.29 -14.45 16 15 H 0.06 1.75 7.10 -52.49 -0.37 1.38 16 16 C 0.06 1.56 5.46 -17.82 -0.10 1.47 16 17 N -0.90 -26.56 13.29 55.43 0.74 -25.82 16 18 Si 0.90 21.62 29.54 -169.99 -5.02 16.60 16 19 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 20 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 21 H -0.27 -6.49 7.11 56.52 0.40 -6.09 16 22 H 0.10 0.75 8.14 -51.93 -0.42 0.32 16 23 H 0.06 0.40 7.71 -51.93 -0.40 0.00 16 24 H 0.06 0.46 7.71 -51.93 -0.40 0.06 16 25 H 0.15 1.39 6.46 -52.49 -0.34 1.05 16 26 H 0.17 2.17 8.04 -52.48 -0.42 1.75 16 27 H 0.04 0.72 7.90 -51.93 -0.41 0.31 16 28 H 0.08 1.37 7.80 -51.93 -0.41 0.97 16 29 H 0.02 0.31 7.96 -51.93 -0.41 -0.10 16 30 H 0.05 0.88 4.62 -51.93 -0.24 0.64 16 31 H 0.07 1.43 6.86 -51.93 -0.36 1.08 16 32 H 0.03 0.83 7.93 -51.93 -0.41 0.42 16 33 H -0.01 -0.22 8.12 -51.93 -0.42 -0.64 16 34 H 0.26 7.29 8.31 -40.82 -0.34 6.95 16 LS Contribution 298.94 15.07 4.50 4.50 Total: -1.00 -31.09 298.94 -7.23 -38.32 By element: Atomic # 1 Polarization: -0.47 SS G_CDS: -4.15 Total: -4.62 kcal Atomic # 6 Polarization: -2.34 SS G_CDS: -0.39 Total: -2.73 kcal Atomic # 7 Polarization: -45.55 SS G_CDS: -0.54 Total: -46.08 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -0.13 Total: -4.01 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -5.02 Total: 16.60 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.51 Total: -1.97 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -31.09 -7.23 -38.32 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001141332232.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.872 kcal (2) G-P(sol) polarization free energy of solvation -31.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.317 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds