Wall clock time and date at job start Mon Mar 30 2020 01:02:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53001 * 109.46886 * 2 1 4 4 C 1.53000 * 109.46886 * 180.02562 * 3 2 1 5 5 O 1.42903 * 109.46726 * 180.02562 * 4 3 2 6 6 C 1.35958 * 116.99807 * 180.02562 * 5 4 3 7 7 C 1.38672 * 120.38142 * 359.97438 * 6 5 4 8 8 N 1.31868 * 120.80890 * 179.97438 * 7 6 5 9 9 C 1.32457 * 121.69040 * 0.02562 * 8 7 6 10 10 N 1.38986 * 119.65946 * 179.97438 * 9 8 7 11 11 C 1.36880 * 119.99855 * 359.97438 * 10 9 8 12 12 H 1.07998 * 120.00257 * 0.02562 * 11 10 9 13 13 C 1.38776 * 119.99828 * 180.02562 * 11 10 9 14 14 N 1.31599 * 120.00279 * 0.02562 * 13 11 10 15 15 Si 1.86805 * 119.99977 * 180.02562 * 13 11 10 16 16 H 1.48496 * 109.46960 * 60.00054 * 15 13 11 17 17 H 1.48504 * 109.47056 * 180.02562 * 15 13 11 18 18 H 1.48497 * 109.46952 * 300.00249 * 15 13 11 19 19 C 1.39299 * 120.68151 * 0.02562 * 9 8 7 20 20 Cl 1.73601 * 120.43439 * 179.97438 * 19 9 8 21 21 C 1.38393 * 119.12921 * 359.68148 * 19 9 8 22 22 H 1.09001 * 109.47583 * 60.00267 * 1 2 3 23 23 H 1.09004 * 109.46724 * 179.97438 * 1 2 3 24 24 H 1.08992 * 109.47098 * 299.99158 * 1 2 3 25 25 H 1.09001 * 109.46741 * 240.00394 * 2 1 3 26 26 H 1.09002 * 109.47398 * 120.00496 * 2 1 3 27 27 H 1.09001 * 109.46652 * 60.00345 * 3 2 1 28 28 H 1.08992 * 109.47514 * 300.00434 * 3 2 1 29 29 H 1.09002 * 109.47398 * 300.00496 * 4 3 2 30 30 H 1.09001 * 109.47194 * 60.00677 * 4 3 2 31 31 H 1.07998 * 119.59402 * 0.03257 * 7 6 5 32 32 H 0.97001 * 120.00052 * 180.02562 * 10 9 8 33 33 H 0.96997 * 120.00270 * 179.97438 * 14 13 11 34 34 H 1.08000 * 120.77810 * 180.29141 * 21 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 3.5699 1.4425 -0.0006 5 8 4.0462 2.7899 0.0000 6 6 5.3941 2.9680 -0.0010 7 6 6.2461 1.8740 -0.0020 8 7 7.5547 2.0371 -0.0035 9 6 8.1058 3.2415 -0.0036 10 7 9.4902 3.3644 -0.0047 11 6 10.2767 2.2441 -0.0051 12 1 9.8216 1.2647 -0.0050 13 6 11.6591 2.3668 -0.0056 14 7 12.2138 3.5602 -0.0052 15 14 12.7325 0.8380 -0.0069 16 1 12.4434 0.0313 -1.2197 17 1 14.1628 1.2374 -0.0066 18 1 12.4444 0.0300 1.2053 19 6 7.3122 4.3863 -0.0016 20 17 8.0413 5.9618 -0.0011 21 6 5.9349 4.2512 -0.0062 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5137 0.8900 25 1 1.8933 -0.5138 -0.8900 26 1 1.8934 -0.5139 0.8899 27 1 1.6766 1.9563 0.8900 28 1 1.6766 1.9564 -0.8899 29 1 3.9337 0.9285 0.8891 30 1 3.9329 0.9289 -0.8909 31 1 5.8329 0.8762 -0.0026 32 1 9.8991 4.2440 -0.0044 33 1 13.1799 3.6460 -0.0052 34 1 5.2943 5.1207 -0.0095 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155534428.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:02:05 Heat of formation + Delta-G solvation = -24.120221 kcal Electronic energy + Delta-G solvation = -17678.191659 eV Core-core repulsion = 14636.747634 eV Total energy + Delta-G solvation = -3041.444025 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -39.72154 -37.88670 -35.73898 -35.40436 -34.71635 -31.87024 -31.27911 -29.42560 -27.75208 -24.87690 -24.17748 -22.27375 -21.44205 -21.08994 -18.04831 -17.55884 -16.85849 -16.18521 -15.80005 -14.69475 -14.65863 -14.32932 -14.07903 -13.68143 -13.55171 -13.21795 -12.90535 -12.40198 -12.39268 -11.90959 -11.60120 -11.43512 -11.27737 -11.24271 -11.05568 -11.02790 -10.69703 -10.64572 -10.48662 -10.17287 -10.01012 -8.70004 -8.62495 -8.51959 -6.81518 -6.64244 -3.78910 1.89923 2.26413 2.87763 3.15523 3.17010 3.18877 3.75398 4.00473 4.50221 4.73887 4.76664 4.88055 4.94488 5.14731 5.18439 5.34453 5.39673 5.48637 5.54677 5.62466 5.66756 5.71732 5.83428 5.94871 6.08979 6.15696 6.29042 6.54387 6.61765 7.06121 7.36528 7.66654 8.01569 8.56520 8.82395 9.17217 9.57811 10.51088 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.020955 B = 0.004281 C = 0.003569 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1335.907439 B = 6538.270220 C = 7843.126513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.123 4.123 3 C -0.118 4.118 4 C 0.063 3.937 5 O -0.322 6.322 6 C -0.064 4.064 7 C 0.103 3.897 8 N -0.510 5.510 9 C 0.343 3.657 10 N -0.517 5.517 11 C -0.284 4.284 12 H 0.115 0.885 13 C 0.018 3.982 14 N -0.886 5.886 15 Si 0.939 3.061 16 H -0.270 1.270 17 H -0.282 1.282 18 H -0.270 1.270 19 C -0.169 4.169 20 Cl -0.084 7.084 21 C -0.032 4.032 22 H 0.054 0.946 23 H 0.054 0.946 24 H 0.054 0.946 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.054 0.946 30 H 0.054 0.946 31 H 0.143 0.857 32 H 0.412 0.588 33 H 0.278 0.722 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.990 -3.368 0.001 15.363 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.160 4.160 3 C -0.155 4.155 4 C -0.013 4.013 5 O -0.236 6.236 6 C -0.116 4.116 7 C -0.063 4.063 8 N -0.231 5.231 9 C 0.099 3.901 10 N -0.124 5.124 11 C -0.415 4.415 12 H 0.132 0.868 13 C -0.186 4.186 14 N -0.522 5.522 15 Si 0.765 3.235 16 H -0.196 1.196 17 H -0.207 1.207 18 H -0.196 1.196 19 C -0.207 4.207 20 Cl -0.056 7.056 21 C -0.059 4.059 22 H 0.073 0.927 23 H 0.073 0.927 24 H 0.074 0.926 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.161 0.839 32 H 0.250 0.750 33 H 0.088 0.912 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -13.951 -3.821 -0.001 14.465 hybrid contribution 0.381 0.395 -0.002 0.548 sum -13.570 -3.427 -0.003 13.996 Atomic orbital electron populations 1.21749 0.95524 1.01608 1.01961 1.21441 0.96080 0.96074 1.02424 1.21538 0.93396 0.97215 1.03368 1.22599 0.94537 0.83340 1.00822 1.85879 1.19023 1.27272 1.91443 1.18982 0.82671 0.93876 1.16077 1.22445 0.88789 0.97315 0.97737 1.67241 1.11506 1.22632 1.21766 1.17807 0.85970 0.87238 0.99128 1.41095 1.00018 1.10240 1.61032 1.19966 0.87687 0.88157 1.45662 0.86759 1.25459 0.97422 0.98682 0.97084 1.69695 1.12661 1.22525 1.47348 0.85766 0.78105 0.80271 0.79310 1.19563 1.20744 1.19567 1.20491 0.92368 0.84852 1.22964 1.98283 1.83224 1.26405 1.97692 1.20048 0.91952 0.95410 0.98470 0.92655 0.92692 0.92649 0.91702 0.91699 0.91105 0.91112 0.92771 0.92769 0.83949 0.75006 0.91197 0.85244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.07 9.91 37.16 0.37 -0.70 16 2 C -0.12 -0.99 5.93 -26.73 -0.16 -1.15 16 3 C -0.12 -1.17 5.58 -26.73 -0.15 -1.32 16 4 C 0.06 0.79 4.75 37.16 0.18 0.96 16 5 O -0.32 -5.28 10.15 -19.61 -0.20 -5.48 16 6 C -0.06 -1.20 6.71 -39.04 -0.26 -1.46 16 7 C 0.10 1.98 10.21 -17.38 -0.18 1.81 16 8 N -0.51 -11.75 9.08 -12.25 -0.11 -11.86 16 9 C 0.34 8.18 7.43 -154.93 -1.15 7.03 16 10 N -0.52 -13.31 5.38 -11.12 -0.06 -13.37 16 11 C -0.28 -7.55 9.70 -15.10 -0.15 -7.70 16 12 H 0.11 3.03 7.08 -52.49 -0.37 2.66 16 13 C 0.02 0.46 5.50 -17.45 -0.10 0.36 16 14 N -0.89 -23.76 13.05 55.49 0.72 -23.03 16 15 Si 0.94 20.10 29.55 -169.99 -5.02 15.08 16 16 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 17 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 18 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 19 C -0.17 -3.59 6.36 -39.13 -0.25 -3.84 16 20 Cl -0.08 -1.64 27.61 -51.86 -1.43 -3.07 16 21 C -0.03 -0.62 9.92 -39.15 -0.39 -1.01 16 22 H 0.05 0.38 8.14 -51.93 -0.42 -0.04 16 23 H 0.05 0.34 8.14 -51.93 -0.42 -0.08 16 24 H 0.05 0.38 8.14 -51.93 -0.42 -0.04 16 25 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 26 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 27 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 28 H 0.07 0.71 8.14 -51.93 -0.42 0.28 16 29 H 0.05 0.65 7.67 -51.93 -0.40 0.25 16 30 H 0.05 0.65 7.67 -51.93 -0.40 0.25 16 31 H 0.14 2.28 6.30 -52.49 -0.33 1.95 16 32 H 0.41 10.64 6.54 -40.82 -0.27 10.38 16 33 H 0.28 7.01 8.31 -40.82 -0.34 6.67 16 34 H 0.13 2.19 8.06 -52.49 -0.42 1.77 16 LS Contribution 306.80 15.07 4.62 4.62 Total: -1.00 -27.79 306.80 -7.99 -35.79 By element: Atomic # 1 Polarization: 12.61 SS G_CDS: -4.28 Total: 8.33 kcal Atomic # 6 Polarization: -4.78 SS G_CDS: -2.23 Total: -7.01 kcal Atomic # 7 Polarization: -48.81 SS G_CDS: 0.55 Total: -48.26 kcal Atomic # 8 Polarization: -5.28 SS G_CDS: -0.20 Total: -5.48 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -5.02 Total: 15.08 kcal Atomic # 17 Polarization: -1.64 SS G_CDS: -1.43 Total: -3.07 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -27.79 -7.99 -35.79 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155534428.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.667 kcal (2) G-P(sol) polarization free energy of solvation -27.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.787 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds