Wall clock time and date at job start Mon Mar 30 2020 01:26:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35694 * 117.00278 * 2 1 4 4 C 1.38743 * 119.63164 * 179.97438 * 3 2 1 5 5 C 1.38617 * 119.28783 * 180.02562 * 4 3 2 6 6 C 1.38569 * 118.55566 * 359.97438 * 5 4 3 7 7 Cl 1.73599 * 120.39810 * 179.97438 * 6 5 4 8 8 C 1.39070 * 119.19790 * 0.25608 * 6 5 4 9 9 N 1.39066 * 119.67151 * 179.74484 * 8 6 5 10 10 C 1.46503 * 119.99666 * 179.97438 * 9 8 6 11 11 C 1.53002 * 109.46703 * 180.02562 * 10 9 8 12 12 C 1.53004 * 109.46756 * 180.02562 * 11 10 9 13 13 C 1.50699 * 109.46861 * 180.02562 * 12 11 10 14 14 H 1.07999 * 120.00400 * 359.97438 * 13 12 11 15 15 C 1.37884 * 119.99859 * 180.02562 * 13 12 11 16 16 N 1.31510 * 119.99825 * 359.97438 * 15 13 12 17 17 Si 1.86797 * 119.99998 * 179.97438 * 15 13 12 18 18 H 1.48502 * 109.47003 * 59.99661 * 17 15 13 19 19 H 1.48495 * 109.47162 * 179.97438 * 17 15 13 20 20 H 1.48500 * 109.47292 * 300.00074 * 17 15 13 21 21 N 1.32330 * 119.62427 * 0.02562 * 3 2 1 22 22 H 1.08997 * 109.46938 * 179.97438 * 1 2 3 23 23 H 1.09002 * 109.47468 * 299.99952 * 1 2 3 24 24 H 1.09002 * 109.46704 * 60.00026 * 1 2 3 25 25 H 1.08004 * 120.35694 * 0.04112 * 4 3 2 26 26 H 1.07998 * 120.72573 * 179.97438 * 5 4 3 27 27 H 0.96999 * 120.00118 * 0.02562 * 9 8 6 28 28 H 1.08997 * 109.47537 * 300.00372 * 10 9 8 29 29 H 1.09002 * 109.46752 * 60.00275 * 10 9 8 30 30 H 1.09000 * 109.46863 * 299.99706 * 11 10 9 31 31 H 1.08994 * 109.47163 * 59.99914 * 11 10 9 32 32 H 1.09005 * 109.47234 * 299.99848 * 12 11 10 33 33 H 1.09003 * 109.47328 * 60.00233 * 12 11 10 34 34 H 0.97000 * 120.00015 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2090 0.0000 4 6 3.4310 1.2726 0.0005 5 6 4.0530 2.5115 0.0011 6 6 3.2624 3.6495 0.0005 7 17 3.9911 5.2252 0.0018 8 6 1.8784 3.5141 0.0049 9 7 1.0756 4.6497 0.0097 10 6 -0.3833 4.5153 0.0137 11 6 -1.0233 5.9050 0.0180 12 6 -2.5469 5.7647 0.0229 13 6 -3.1773 7.1335 0.0265 14 1 -2.5538 8.0153 0.0258 15 6 -4.5503 7.2601 0.0316 16 7 -5.3096 6.1863 0.0330 17 14 -5.3318 8.9567 0.0368 18 1 -4.9074 9.7009 -1.1762 19 1 -6.8105 8.8206 0.0414 20 1 -4.8986 9.6976 1.2487 21 7 1.3171 2.3141 0.0005 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 4.0190 0.3667 0.0003 26 1 5.1302 2.5880 0.0019 27 1 1.4815 5.5306 0.0097 28 1 -0.7006 3.9722 -0.8764 29 1 -0.6953 3.9684 0.9035 30 1 -0.7060 6.4484 0.9081 31 1 -0.7112 6.4515 -0.8719 32 1 -2.8646 5.2211 -0.8669 33 1 -2.8587 5.2184 0.9131 34 1 -6.2755 6.2754 0.0362 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001157640840.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:00 Heat of formation + Delta-G solvation = -21.128452 kcal Electronic energy + Delta-G solvation = -17719.021620 eV Core-core repulsion = 14677.707328 eV Total energy + Delta-G solvation = -3041.314292 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.69824 -38.36921 -36.47821 -36.07447 -33.66251 -32.20065 -31.45552 -29.43823 -27.38853 -26.11654 -23.62659 -23.09713 -22.00802 -20.43756 -18.56826 -17.24932 -16.52792 -16.33011 -16.13124 -15.95235 -14.92787 -14.78664 -14.46480 -13.86965 -13.83103 -13.46736 -12.89195 -12.31209 -12.17469 -12.11185 -11.89030 -11.82037 -11.26036 -11.10335 -10.85015 -10.72180 -10.61841 -10.18739 -9.81043 -9.77293 -9.45844 -9.18185 -9.16037 -8.38878 -7.56911 -6.03960 -4.06822 1.08943 1.30406 2.10485 2.96572 3.28375 3.31138 3.35736 3.38346 3.69555 4.35837 4.43936 4.82897 5.00519 5.12828 5.25942 5.32034 5.33594 5.59220 5.63769 5.70187 5.75765 5.89217 6.12039 6.15225 6.57938 6.57994 6.89717 6.97583 7.30429 7.33121 7.60370 7.73040 7.94558 8.08002 8.36257 8.99365 9.57444 11.07329 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.021051 B = 0.003981 C = 0.003361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1329.759048 B = 7031.348317 C = 8330.053521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.306 6.306 3 C 0.375 3.625 4 C -0.253 4.253 5 C 0.010 3.990 6 C -0.202 4.202 7 Cl -0.067 7.067 8 C 0.462 3.538 9 N -0.707 5.707 10 C 0.127 3.873 11 C -0.124 4.124 12 C 0.027 3.973 13 C -0.523 4.523 14 H 0.055 0.945 15 C 0.058 3.942 16 N -0.895 5.895 17 Si 0.893 3.107 18 H -0.277 1.277 19 H -0.287 1.287 20 H -0.277 1.277 21 N -0.580 5.580 22 H 0.095 0.905 23 H 0.062 0.938 24 H 0.062 0.938 25 H 0.143 0.857 26 H 0.146 0.854 27 H 0.411 0.589 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.054 0.946 31 H 0.054 0.946 32 H 0.018 0.982 33 H 0.019 0.981 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 17.877 -9.847 -0.063 20.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.212 6.212 3 C 0.194 3.806 4 C -0.277 4.277 5 C -0.015 4.015 6 C -0.237 4.237 7 Cl -0.038 7.038 8 C 0.222 3.778 9 N -0.337 5.337 10 C 0.004 3.996 11 C -0.162 4.162 12 C -0.011 4.011 13 C -0.561 4.561 14 H 0.073 0.927 15 C -0.144 4.144 16 N -0.534 5.534 17 Si 0.721 3.279 18 H -0.202 1.202 19 H -0.212 1.212 20 H -0.202 1.202 21 N -0.314 5.314 22 H 0.114 0.886 23 H 0.081 0.919 24 H 0.081 0.919 25 H 0.160 0.840 26 H 0.164 0.836 27 H 0.249 0.751 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.037 0.963 33 H 0.037 0.963 34 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 16.701 -10.104 -0.063 19.520 hybrid contribution 0.250 1.546 0.003 1.566 sum 16.951 -8.558 -0.060 18.989 Atomic orbital electron populations 1.22915 0.76707 1.02956 1.03150 1.86241 1.23359 1.24339 1.87265 1.19524 0.89007 0.83827 0.88233 1.20613 0.91552 0.98668 1.16858 1.20959 1.00045 0.89406 0.91132 1.20923 0.91726 0.87823 1.23207 1.98332 1.82593 1.25202 1.97721 1.17596 0.85911 0.86438 0.87881 1.45181 1.06941 1.04828 1.76752 1.21632 0.76487 0.99678 1.01769 1.21917 1.00076 0.93217 1.00960 1.19001 0.87148 0.97384 0.97554 1.21173 0.91453 0.92491 1.51033 0.92701 1.25014 0.97444 0.96681 0.95214 1.69948 1.04697 1.28170 1.50538 0.86642 0.78116 0.84521 0.78634 1.20229 1.21248 1.20224 1.66889 1.39457 0.96964 1.28125 0.88617 0.91902 0.91914 0.83952 0.83607 0.75075 0.91870 0.91869 0.92729 0.92722 0.96314 0.96311 0.92877 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.41 10.38 101.05 1.05 1.46 16 2 O -0.31 -3.85 10.47 -18.78 -0.20 -4.05 16 3 C 0.37 5.07 7.48 -17.15 -0.13 4.94 16 4 C -0.25 -2.82 10.03 -39.26 -0.39 -3.22 16 5 C 0.01 0.11 9.96 -39.32 -0.39 -0.28 16 6 C -0.20 -2.57 6.36 -39.15 -0.25 -2.82 16 7 Cl -0.07 -0.77 27.60 -51.86 -1.43 -2.20 16 8 C 0.46 6.85 7.48 -154.92 -1.16 5.69 16 9 N -0.71 -10.76 5.66 -60.40 -0.34 -11.11 16 10 C 0.13 2.20 5.69 -4.04 -0.02 2.18 16 11 C -0.12 -2.44 5.27 -26.73 -0.14 -2.58 16 12 C 0.03 0.67 4.97 -27.88 -0.14 0.53 16 13 C -0.52 -14.59 9.11 -34.44 -0.31 -14.91 16 14 H 0.05 1.48 7.74 -52.49 -0.41 1.07 16 15 C 0.06 1.64 5.46 -17.82 -0.10 1.55 16 16 N -0.89 -26.60 13.29 55.43 0.74 -25.86 16 17 Si 0.89 21.46 29.54 -169.99 -5.02 16.44 16 18 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 19 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 20 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 21 N -0.58 -8.82 8.41 -12.48 -0.10 -8.92 16 22 H 0.10 0.76 8.14 -51.93 -0.42 0.34 16 23 H 0.06 0.73 8.10 -51.93 -0.42 0.31 16 24 H 0.06 0.73 8.10 -51.93 -0.42 0.30 16 25 H 0.14 1.24 8.06 -52.48 -0.42 0.82 16 26 H 0.15 1.11 8.06 -52.49 -0.42 0.69 16 27 H 0.41 5.79 7.12 -40.82 -0.29 5.50 16 28 H 0.06 1.13 8.14 -51.93 -0.42 0.71 16 29 H 0.06 1.13 8.14 -51.93 -0.42 0.71 16 30 H 0.05 1.05 8.14 -51.93 -0.42 0.63 16 31 H 0.05 1.06 8.14 -51.93 -0.42 0.63 16 32 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 33 H 0.02 0.50 8.14 -51.93 -0.42 0.07 16 34 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 LS Contribution 310.98 15.07 4.69 4.69 Total: -1.00 -30.14 310.98 -8.14 -38.27 By element: Atomic # 1 Polarization: 4.68 SS G_CDS: -4.48 Total: 0.20 kcal Atomic # 6 Polarization: -5.48 SS G_CDS: -1.99 Total: -7.46 kcal Atomic # 7 Polarization: -46.18 SS G_CDS: 0.29 Total: -45.89 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.20 Total: -4.05 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -5.02 Total: 16.44 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.43 Total: -2.20 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -30.14 -8.14 -38.27 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001157640840.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.146 kcal (2) G-P(sol) polarization free energy of solvation -30.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds