Wall clock time and date at job start Mon Mar 30 2020 01:26:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35681 * 116.99841 * 2 1 4 4 C 1.38725 * 119.63122 * 180.02562 * 3 2 1 5 5 C 1.38730 * 119.25667 * 180.25666 * 4 3 2 6 6 Cl 1.73601 * 120.72968 * 179.74696 * 5 4 3 7 7 C 1.38649 * 118.54182 * 359.49980 * 5 4 3 8 8 C 1.38921 * 119.20371 * 0.52061 * 7 5 4 9 9 N 1.39009 * 119.66138 * 179.70124 * 8 7 5 10 10 C 1.46497 * 120.00111 * 0.02562 * 9 8 7 11 11 C 1.52993 * 109.47449 * 180.02562 * 10 9 8 12 12 C 1.52997 * 109.47573 * 180.02562 * 11 10 9 13 13 C 1.50694 * 109.47215 * 179.97438 * 12 11 10 14 14 H 1.07999 * 120.00136 * 359.97438 * 13 12 11 15 15 C 1.37879 * 119.99790 * 179.97438 * 13 12 11 16 16 N 1.31523 * 119.99847 * 180.02562 * 15 13 12 17 17 Si 1.86801 * 120.00238 * 359.97438 * 15 13 12 18 18 H 1.48508 * 109.46693 * 90.00008 * 17 15 13 19 19 H 1.48499 * 109.47072 * 210.00049 * 17 15 13 20 20 H 1.48498 * 109.46922 * 330.00509 * 17 15 13 21 21 N 1.32345 * 119.63191 * 0.02562 * 3 2 1 22 22 H 1.09000 * 109.47313 * 300.00089 * 1 2 3 23 23 H 1.08995 * 109.47120 * 59.99905 * 1 2 3 24 24 H 1.08996 * 109.46934 * 180.02562 * 1 2 3 25 25 H 1.08002 * 120.36787 * 359.97295 * 4 3 2 26 26 H 1.07997 * 120.39601 * 180.24261 * 7 5 4 27 27 H 0.96999 * 119.99719 * 180.02562 * 9 8 7 28 28 H 1.09006 * 109.46992 * 300.00417 * 10 9 8 29 29 H 1.09007 * 109.47317 * 59.99729 * 10 9 8 30 30 H 1.09004 * 109.46812 * 300.00260 * 11 10 9 31 31 H 1.08998 * 109.47284 * 59.99282 * 11 10 9 32 32 H 1.09004 * 109.47224 * 299.99959 * 12 11 10 33 33 H 1.09001 * 109.46917 * 59.99863 * 12 11 10 34 34 H 0.97001 * 119.99909 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2089 0.0000 4 6 3.4307 1.2727 -0.0005 5 6 4.0524 2.5129 0.0049 6 17 5.7840 2.6371 0.0110 7 6 3.2605 3.6509 0.0001 8 6 1.8780 3.5147 0.0010 9 7 1.0749 4.6493 0.0025 10 6 1.6873 5.9802 0.0025 11 6 0.5902 7.0464 0.0049 12 6 1.2297 8.4364 0.0042 13 6 0.1490 9.4866 0.0060 14 1 -0.8901 9.1922 0.0070 15 6 0.4868 10.8233 0.0063 16 7 -0.4564 11.7399 0.0083 17 14 2.2840 11.3326 0.0052 18 1 2.7592 11.4681 -1.3952 19 1 2.4302 12.6338 0.7057 20 1 3.0913 10.3006 0.7042 21 7 1.3170 2.3142 0.0005 22 1 -0.3634 0.5138 0.8900 23 1 -0.3633 0.5138 -0.8899 24 1 -0.3633 -1.0276 0.0005 25 1 4.0190 0.3669 -0.0005 26 1 3.7130 4.6315 0.0001 27 1 0.1091 4.5598 0.0036 28 1 2.3070 6.0949 0.8918 29 1 2.3050 6.0959 -0.8882 30 1 -0.0299 6.9317 -0.8842 31 1 -0.0272 6.9305 0.8957 32 1 1.8500 8.5513 0.8931 33 1 1.8467 8.5519 -0.8868 34 1 -0.2188 12.6804 0.0082 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001157641356.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:05 Heat of formation + Delta-G solvation = -16.484130 kcal Electronic energy + Delta-G solvation = -17487.531171 eV Core-core repulsion = 14446.418272 eV Total energy + Delta-G solvation = -3041.112899 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.77730 -38.48867 -37.04325 -36.06148 -33.67233 -32.28517 -31.55208 -29.71738 -27.42954 -26.79760 -23.77750 -23.01137 -21.95617 -20.40674 -18.52631 -17.79561 -16.76562 -16.23781 -16.17312 -15.70327 -15.15631 -15.12265 -14.31999 -14.16086 -13.96073 -13.91952 -12.74980 -12.70003 -12.60338 -12.26141 -12.05291 -11.98082 -11.47298 -11.28208 -11.13674 -10.93613 -10.17650 -10.02345 -9.92214 -9.82443 -9.76275 -9.29748 -9.27346 -8.60931 -7.76312 -6.11154 -4.10525 1.00764 1.21746 1.69650 2.90061 3.14702 3.26294 3.34412 3.36363 3.64338 4.38872 4.57214 4.86711 4.93791 5.06118 5.14053 5.14345 5.22319 5.32685 5.42626 5.45788 5.56395 5.79647 5.88689 5.95816 6.31202 6.32885 6.66735 6.89654 6.95375 7.13507 7.27032 7.50570 7.69934 7.94715 8.44853 8.92694 9.50387 11.02101 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.021928 B = 0.003712 C = 0.003186 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1276.610247 B = 7541.629546 C = 8787.183679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 O -0.305 6.305 3 C 0.381 3.619 4 C -0.256 4.256 5 C 0.083 3.917 6 Cl -0.050 7.050 7 C -0.270 4.270 8 C 0.459 3.541 9 N -0.709 5.709 10 C 0.118 3.882 11 C -0.113 4.113 12 C -0.010 4.010 13 C -0.524 4.524 14 H 0.072 0.928 15 C 0.067 3.933 16 N -0.902 5.902 17 Si 0.880 3.120 18 H -0.276 1.276 19 H -0.287 1.287 20 H -0.265 1.265 21 N -0.598 5.598 22 H 0.060 0.940 23 H 0.060 0.940 24 H 0.095 0.905 25 H 0.145 0.855 26 H 0.146 0.854 27 H 0.408 0.592 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.062 0.938 31 H 0.063 0.937 32 H 0.019 0.981 33 H 0.015 0.985 34 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.563 -22.168 0.011 23.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.211 6.211 3 C 0.201 3.799 4 C -0.280 4.280 5 C 0.049 3.951 6 Cl -0.021 7.021 7 C -0.296 4.296 8 C 0.221 3.779 9 N -0.339 5.339 10 C -0.006 4.006 11 C -0.151 4.151 12 C -0.048 4.048 13 C -0.562 4.562 14 H 0.090 0.910 15 C -0.135 4.135 16 N -0.540 5.540 17 Si 0.708 3.292 18 H -0.202 1.202 19 H -0.213 1.213 20 H -0.189 1.189 21 N -0.333 5.333 22 H 0.079 0.921 23 H 0.079 0.921 24 H 0.113 0.887 25 H 0.163 0.837 26 H 0.164 0.836 27 H 0.244 0.756 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.081 0.919 31 H 0.081 0.919 32 H 0.037 0.963 33 H 0.033 0.967 34 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 6.989 -22.074 0.016 23.154 hybrid contribution 1.227 0.610 -0.021 1.371 sum 8.216 -21.464 -0.005 22.983 Atomic orbital electron populations 1.22870 0.76980 1.02861 1.02767 1.86240 1.23108 1.24255 1.87545 1.19073 0.88189 0.83772 0.88905 1.20384 0.91983 0.97788 1.17818 1.20500 0.85125 0.93532 0.95948 1.98389 1.08946 1.98410 1.96382 1.21120 0.92159 0.99421 1.16888 1.17699 0.87425 0.85348 0.87431 1.44912 1.08726 1.02576 1.77662 1.21831 0.97627 0.79710 1.01411 1.21692 0.96649 0.94623 1.02130 1.19499 0.97011 0.91624 0.96636 1.21077 0.93937 0.89877 1.51309 0.90996 1.25038 0.97369 0.96631 0.94428 1.69913 1.32570 1.00786 1.50774 0.86771 0.85782 0.78119 0.78575 1.20218 1.21326 1.18929 1.66675 1.40711 0.97566 1.28318 0.92130 0.92124 0.88652 0.83736 0.83628 0.75625 0.91731 0.91731 0.91891 0.91862 0.96273 0.96710 0.92633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.35 10.38 101.05 1.05 1.40 16 2 O -0.31 -3.50 10.47 -18.75 -0.20 -3.69 16 3 C 0.38 4.89 7.48 -17.15 -0.13 4.76 16 4 C -0.26 -3.03 9.85 -39.22 -0.39 -3.42 16 5 C 0.08 1.00 6.36 -39.25 -0.25 0.75 16 6 Cl -0.05 -0.54 29.01 -51.86 -1.50 -2.04 16 7 C -0.27 -3.48 9.14 -39.18 -0.36 -3.84 16 8 C 0.46 6.30 7.65 -155.00 -1.19 5.11 16 9 N -0.71 -9.49 5.73 -60.45 -0.35 -9.83 16 10 C 0.12 1.68 4.89 -4.05 -0.02 1.66 16 11 C -0.11 -1.98 5.27 -26.74 -0.14 -2.12 16 12 C -0.01 -0.22 4.04 -27.89 -0.11 -0.33 16 13 C -0.52 -14.40 9.66 -34.44 -0.33 -14.73 16 14 H 0.07 2.13 7.99 -52.49 -0.42 1.71 16 15 C 0.07 1.90 5.47 -17.82 -0.10 1.80 16 16 N -0.90 -27.32 13.96 55.43 0.77 -26.54 16 17 Si 0.88 21.07 27.47 -169.99 -4.67 16.40 16 18 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 19 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 20 H -0.26 -6.01 6.54 56.52 0.37 -5.64 16 21 N -0.60 -8.17 9.24 -12.53 -0.12 -8.28 16 22 H 0.06 0.54 8.10 -51.93 -0.42 0.12 16 23 H 0.06 0.54 8.10 -51.93 -0.42 0.12 16 24 H 0.10 0.56 8.14 -51.93 -0.42 0.13 16 25 H 0.14 1.46 8.06 -52.49 -0.42 1.03 16 26 H 0.15 1.78 6.69 -52.49 -0.35 1.43 16 27 H 0.41 5.17 8.60 -40.82 -0.35 4.81 16 28 H 0.06 0.90 7.92 -51.93 -0.41 0.49 16 29 H 0.06 0.90 7.92 -51.93 -0.41 0.48 16 30 H 0.06 1.11 8.14 -51.93 -0.42 0.68 16 31 H 0.06 1.11 8.14 -51.93 -0.42 0.69 16 32 H 0.02 0.42 7.20 -51.93 -0.37 0.05 16 33 H 0.01 0.32 7.57 -51.93 -0.39 -0.07 16 34 H 0.26 7.48 8.31 -40.82 -0.34 7.14 16 LS Contribution 307.72 15.07 4.64 4.64 Total: -1.00 -29.91 307.72 -7.79 -37.70 By element: Atomic # 1 Polarization: 5.02 SS G_CDS: -4.41 Total: 0.61 kcal Atomic # 6 Polarization: -6.99 SS G_CDS: -1.96 Total: -8.96 kcal Atomic # 7 Polarization: -44.97 SS G_CDS: 0.31 Total: -44.66 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.20 Total: -3.69 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -4.67 Total: 16.40 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -1.50 Total: -2.04 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -29.91 -7.79 -37.70 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001157641356.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.219 kcal (2) G-P(sol) polarization free energy of solvation -29.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.690 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.794 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.703 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds