Wall clock time and date at job start Mon Mar 30 2020 00:51:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 N 1.31486 * 119.81839 * 2 1 4 4 C 1.32737 * 121.73349 * 180.27454 * 3 2 1 5 5 N 1.38378 * 119.42957 * 179.97438 * 4 3 2 6 6 C 1.46502 * 119.99773 * 180.02562 * 5 4 3 7 7 C 1.52996 * 109.46643 * 180.02562 * 6 5 4 8 8 H 1.08995 * 109.47376 * 59.99839 * 7 6 5 9 9 O 1.42898 * 109.47207 * 299.99031 * 7 6 5 10 10 C 1.53003 * 109.46932 * 179.97438 * 7 6 5 11 11 Cl 1.80299 * 109.47417 * 184.99673 * 10 7 6 12 12 C 1.39704 * 121.13808 * 359.97438 * 4 3 2 13 13 C 1.36565 * 119.49748 * 0.02562 * 12 4 3 14 14 C 1.40761 * 119.81461 * 180.27122 * 2 1 3 15 15 C 1.41201 * 120.57004 * 359.74812 * 14 2 1 16 16 H 1.07992 * 119.99921 * 334.74467 * 15 14 2 17 17 C 1.39871 * 119.99816 * 154.74479 * 15 14 2 18 18 N 1.30903 * 120.00091 * 343.65019 * 17 15 14 19 19 Si 1.86795 * 119.99926 * 163.65273 * 17 15 14 20 20 H 1.48499 * 109.47193 * 359.97438 * 19 17 15 21 21 H 1.48499 * 109.47367 * 119.99890 * 19 17 15 22 22 H 1.48503 * 109.47317 * 239.99737 * 19 17 15 23 23 H 1.09001 * 109.47479 * 269.72714 * 1 2 3 24 24 H 1.08995 * 109.47042 * 29.72777 * 1 2 3 25 25 H 1.09002 * 109.47106 * 149.72665 * 1 2 3 26 26 H 0.97001 * 119.99679 * 0.02562 * 5 4 3 27 27 H 1.09004 * 109.46631 * 299.99975 * 6 5 4 28 28 H 1.08995 * 109.47366 * 60.00051 * 6 5 4 29 29 H 0.96698 * 114.00336 * 300.00685 * 9 7 6 30 30 H 1.09002 * 109.47329 * 305.00093 * 10 7 6 31 31 H 1.09000 * 109.47395 * 64.99627 * 10 7 6 32 32 H 1.08009 * 120.25322 * 180.02562 * 12 4 3 33 33 H 1.07991 * 120.79705 * 179.97438 * 13 12 4 34 34 H 0.97001 * 120.00164 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1608 1.1408 0.0000 4 6 3.4874 1.1851 -0.0054 5 7 4.1267 2.4124 -0.0057 6 6 5.5903 2.4759 -0.0122 7 6 6.0372 3.9391 -0.0104 8 1 5.6560 4.4344 0.8825 9 8 5.5270 4.5944 -1.1733 10 6 7.5658 4.0055 -0.0166 11 17 8.0935 5.7230 0.1335 12 6 4.2494 0.0142 -0.0108 13 6 3.6199 -1.1977 -0.0111 14 6 2.2069 -1.2213 -0.0058 15 6 1.5091 -2.4488 -0.0062 16 1 0.5084 -2.5013 0.3965 17 6 2.1140 -3.5969 -0.5283 18 7 3.1698 -3.4895 -1.2946 19 14 1.4150 -5.2832 -0.1321 20 1 0.2286 -5.1329 0.7482 21 1 1.0150 -5.9616 -1.3911 22 1 2.4461 -6.0959 0.5620 23 1 -0.3634 -0.0049 1.0276 24 1 -0.3633 0.8924 -0.5096 25 1 -0.3633 -0.8875 -0.5181 26 1 3.6057 3.2306 -0.0016 27 1 5.9795 1.9764 0.8750 28 1 5.9716 1.9802 -0.9049 29 1 5.8258 4.2058 -2.0068 30 1 7.9579 3.4303 0.8222 31 1 7.9438 3.5896 -0.9505 32 1 5.3282 0.0670 -0.0148 33 1 4.1882 -2.1160 -0.0157 34 1 3.5891 -4.2857 -1.6569 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001158702208.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:51:10 Heat of formation + Delta-G solvation = -39.286193 kcal Electronic energy + Delta-G solvation = -17953.519494 eV Core-core repulsion = 14911.417823 eV Total energy + Delta-G solvation = -3042.101671 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -38.89604 -38.00510 -36.00000 -34.94002 -33.53250 -31.46291 -30.89270 -29.76712 -26.89940 -25.84907 -23.96929 -22.14403 -21.17930 -19.99373 -17.24361 -16.94755 -16.38678 -16.31258 -15.22431 -15.02350 -14.52032 -13.92639 -13.69094 -13.63184 -13.23986 -13.15794 -12.56021 -12.46295 -11.82520 -11.62220 -11.54820 -11.36547 -11.22040 -11.16641 -10.91645 -10.83427 -10.64583 -10.54649 -10.08478 -9.69958 -9.39626 -8.68034 -8.17408 -8.01706 -6.83940 -6.60692 -4.19689 1.97009 2.70818 2.94756 3.08163 3.13374 3.26911 3.81291 3.95027 4.18691 4.56491 4.63889 4.68180 4.80633 5.07663 5.22099 5.62574 5.67192 5.89288 5.97557 6.37156 6.46847 6.50583 6.68924 6.80727 7.04067 7.20971 7.35885 7.43236 7.45770 7.72470 7.89079 8.24060 8.42691 8.63935 8.83777 8.90747 9.72468 10.22395 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.036810 B = 0.003583 C = 0.003336 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 760.486845 B = 7812.016177 C = 8390.900755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C 0.038 3.962 3 N -0.519 5.519 4 C 0.283 3.717 5 N -0.738 5.738 6 C 0.115 3.885 7 C 0.091 3.909 8 H 0.114 0.886 9 O -0.546 6.546 10 C -0.064 4.064 11 Cl -0.174 7.174 12 C -0.210 4.210 13 C -0.092 4.092 14 C 0.034 3.966 15 C -0.453 4.453 16 H 0.081 0.919 17 C 0.073 3.927 18 N -0.806 5.806 19 Si 0.906 3.094 20 H -0.261 1.261 21 H -0.276 1.276 22 H -0.274 1.274 23 H 0.047 0.953 24 H 0.047 0.953 25 H 0.068 0.932 26 H 0.394 0.606 27 H 0.060 0.940 28 H 0.054 0.946 29 H 0.377 0.623 30 H 0.104 0.896 31 H 0.098 0.902 32 H 0.094 0.906 33 H 0.127 0.873 34 H 0.278 0.722 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.034 7.951 1.305 11.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.101 4.101 3 N -0.235 5.235 4 C 0.050 3.950 5 N -0.379 5.379 6 C -0.012 4.012 7 C 0.031 3.969 8 H 0.131 0.869 9 O -0.351 6.351 10 C -0.128 4.128 11 Cl -0.148 7.148 12 C -0.234 4.234 13 C -0.119 4.119 14 C 0.029 3.971 15 C -0.484 4.484 16 H 0.099 0.901 17 C -0.143 4.143 18 N -0.433 5.433 19 Si 0.731 3.269 20 H -0.184 1.184 21 H -0.201 1.201 22 H -0.199 1.199 23 H 0.066 0.934 24 H 0.066 0.934 25 H 0.087 0.913 26 H 0.229 0.771 27 H 0.078 0.922 28 H 0.072 0.928 29 H 0.224 0.776 30 H 0.123 0.877 31 H 0.117 0.883 32 H 0.113 0.887 33 H 0.144 0.856 34 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 7.631 8.972 1.624 11.890 hybrid contribution 0.629 -1.742 -0.322 1.880 sum 8.260 7.230 1.303 11.054 Atomic orbital electron populations 1.20257 0.91162 1.01130 1.00289 1.20752 0.94720 0.87348 1.07258 1.66297 1.07337 1.31292 1.18551 1.17654 0.88285 0.84795 1.04251 1.43368 1.02729 1.05304 1.86460 1.21592 0.83571 0.94594 1.01448 1.22400 0.90198 0.93380 0.90953 0.86865 1.86653 1.74186 1.58670 1.15562 1.25062 0.97811 0.83940 1.05995 1.98727 1.91723 1.25535 1.98800 1.20768 0.97981 0.92957 1.11650 1.21268 0.94903 0.96130 0.99571 1.18170 0.92182 0.93106 0.93675 1.19381 1.01723 0.92031 1.35239 0.90133 1.25864 0.94403 1.01274 0.92740 1.69825 1.18734 1.31349 1.23437 0.86288 0.79981 0.81477 0.79134 1.18425 1.20133 1.19914 0.93392 0.93373 0.91314 0.77107 0.92206 0.92758 0.77579 0.87722 0.88328 0.88750 0.85576 0.91140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.51 9.57 36.01 0.34 -1.16 16 2 C 0.04 0.95 6.86 -81.79 -0.56 0.39 16 3 N -0.52 -12.67 10.29 -8.04 -0.08 -12.76 16 4 C 0.28 6.34 7.64 -155.12 -1.19 5.15 16 5 N -0.74 -12.97 5.60 -60.36 -0.34 -13.30 16 6 C 0.12 1.47 4.53 -4.04 -0.02 1.45 16 7 C 0.09 0.92 3.13 -26.73 -0.08 0.84 16 8 H 0.11 1.22 8.14 -51.93 -0.42 0.80 16 9 O -0.55 -6.17 12.92 -35.23 -0.46 -6.62 16 10 C -0.06 -0.51 6.31 37.16 0.23 -0.28 16 11 Cl -0.17 -1.76 29.00 -51.86 -1.50 -3.26 16 12 C -0.21 -4.76 9.24 -39.64 -0.37 -5.13 16 13 C -0.09 -2.34 8.73 -39.01 -0.34 -2.68 16 14 C 0.03 0.89 5.58 -106.65 -0.59 0.29 16 15 C -0.45 -11.65 8.13 -37.85 -0.31 -11.96 16 16 H 0.08 1.99 6.87 -52.49 -0.36 1.62 16 17 C 0.07 1.79 5.18 -17.34 -0.09 1.70 16 18 N -0.81 -20.43 10.95 55.54 0.61 -19.82 16 19 Si 0.91 18.36 29.59 -169.99 -5.03 13.33 16 20 H -0.26 -5.22 7.11 56.52 0.40 -4.82 16 21 H -0.28 -5.54 7.11 56.52 0.40 -5.13 16 22 H -0.27 -5.47 7.11 56.52 0.40 -5.07 16 23 H 0.05 0.94 8.14 -51.93 -0.42 0.52 16 24 H 0.05 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.07 1.44 6.77 -51.93 -0.35 1.09 16 26 H 0.39 6.87 8.46 -40.82 -0.35 6.53 16 27 H 0.06 0.75 7.90 -51.93 -0.41 0.34 16 28 H 0.05 0.69 7.90 -51.93 -0.41 0.27 16 29 H 0.38 3.19 9.05 45.56 0.41 3.60 16 30 H 0.10 0.69 8.14 -51.93 -0.42 0.26 16 31 H 0.10 0.64 8.14 -51.93 -0.42 0.21 16 32 H 0.09 1.86 6.64 -52.48 -0.35 1.51 16 33 H 0.13 3.26 6.26 -52.49 -0.33 2.94 16 34 H 0.28 6.42 8.30 -40.82 -0.34 6.08 16 LS Contribution 303.44 15.07 4.57 4.57 Total: -1.00 -29.36 303.44 -8.59 -37.95 By element: Atomic # 1 Polarization: 14.68 SS G_CDS: -3.39 Total: 11.29 kcal Atomic # 6 Polarization: -8.40 SS G_CDS: -2.97 Total: -11.37 kcal Atomic # 7 Polarization: -46.07 SS G_CDS: 0.19 Total: -45.88 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -0.46 Total: -6.62 kcal Atomic # 14 Polarization: 18.36 SS G_CDS: -5.03 Total: 13.33 kcal Atomic # 17 Polarization: -1.76 SS G_CDS: -1.50 Total: -3.26 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -29.36 -8.59 -37.95 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001158702208.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.339 kcal (2) G-P(sol) polarization free energy of solvation -29.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.286 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds