Wall clock time and date at job start Mon Mar 30 2020 00:58:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47173 * 2 1 4 4 C 1.53009 * 109.47400 * 179.97438 * 3 2 1 5 5 N 1.46499 * 109.47149 * 173.75265 * 4 3 2 6 6 C 1.36884 * 119.99712 * 91.83138 * 5 4 3 7 7 H 1.08000 * 119.99778 * 227.46137 * 6 5 4 8 8 C 1.38797 * 119.99777 * 47.18803 * 6 5 4 9 9 N 1.31585 * 119.99638 * 210.97233 * 8 6 5 10 10 Si 1.86801 * 120.00279 * 30.97276 * 8 6 5 11 11 H 1.48507 * 109.46883 * 55.44680 * 10 8 6 12 12 H 1.48494 * 109.47032 * 175.44828 * 10 8 6 13 13 H 1.48503 * 109.46782 * 295.45092 * 10 8 6 14 14 C 1.39023 * 120.00361 * 271.82976 * 5 4 3 15 15 C 1.39137 * 119.69689 * 193.12002 * 14 5 4 16 16 C 1.38365 * 119.11445 * 179.70709 * 15 14 5 17 17 C 1.38940 * 118.51251 * 0.53714 * 16 15 14 18 18 Cl 1.73599 * 120.34322 * 179.77370 * 17 16 15 19 19 C 1.38282 * 119.31445 * 359.74052 * 17 16 15 20 20 N 1.31956 * 120.83365 * 359.97438 * 19 17 16 21 21 O 1.41597 * 119.19186 * 180.02562 * 20 19 17 22 22 H 1.09004 * 109.47213 * 179.97438 * 1 2 3 23 23 H 1.08999 * 109.47070 * 300.00090 * 1 2 3 24 24 H 1.08998 * 109.46621 * 60.00652 * 1 2 3 25 25 H 1.08998 * 109.47530 * 239.99292 * 2 1 3 26 26 H 1.09003 * 109.47079 * 119.99393 * 2 1 3 27 27 H 1.08995 * 109.47632 * 59.99756 * 3 2 1 28 28 H 1.09004 * 109.47465 * 299.99321 * 3 2 1 29 29 H 1.09000 * 109.46417 * 53.75446 * 4 3 2 30 30 H 1.09002 * 109.46928 * 293.75870 * 4 3 2 31 31 H 0.96999 * 120.00012 * 179.97438 * 9 8 6 32 32 H 1.07991 * 120.44443 * 359.97438 * 15 14 5 33 33 H 1.08000 * 120.74429 * 180.28379 * 16 15 14 34 34 H 1.08003 * 119.58692 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 3.5701 1.4425 0.0006 5 7 4.0584 2.8155 -0.1497 6 6 4.3218 3.5734 0.9593 7 1 3.9494 4.5852 1.0227 8 6 5.0625 3.0397 2.0047 9 7 4.8362 3.4337 3.2397 10 14 6.3807 1.7622 1.6586 11 1 7.3449 2.3021 0.6666 12 1 7.0966 1.4359 2.9180 13 1 5.7482 0.5330 1.1160 14 6 4.2544 3.3486 -1.4185 15 6 4.9674 4.5344 -1.5654 16 6 5.1605 5.0510 -2.8344 17 6 4.6222 4.3677 -3.9177 18 17 4.8308 4.9764 -5.5301 19 6 3.9193 3.1972 -3.6984 20 7 3.7559 2.7252 -2.4770 21 8 3.0303 1.5233 -2.2925 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8900 24 1 -0.3632 0.5137 -0.8900 25 1 1.8934 -0.5139 -0.8899 26 1 1.8933 -0.5138 0.8901 27 1 1.6767 1.9563 0.8899 28 1 1.6768 1.9563 -0.8901 29 1 3.9336 0.8348 -0.8279 30 1 3.9330 1.0286 0.9415 31 1 5.3536 3.0605 3.9703 32 1 5.3684 5.0424 -0.7009 33 1 5.7138 5.9672 -2.9791 34 1 3.4993 2.6622 -4.5374 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001167132248.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:58:30 Heat of formation + Delta-G solvation = 64.617656 kcal Electronic energy + Delta-G solvation = -19084.517003 eV Core-core repulsion = 16046.920941 eV Total energy + Delta-G solvation = -3037.596062 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -40.47375 -37.07601 -36.12788 -34.25754 -33.41040 -32.61811 -29.90191 -29.12315 -27.82592 -25.16950 -23.65637 -22.88125 -21.42612 -20.41196 -18.00358 -17.02662 -16.56460 -16.05783 -15.12749 -14.84077 -14.69256 -14.34622 -13.93667 -13.45551 -13.21862 -13.04292 -12.53243 -12.20171 -12.05327 -11.88080 -11.61097 -11.48134 -11.15343 -10.69064 -10.64862 -10.50126 -10.45440 -10.24822 -10.11376 -9.55314 -9.37691 -9.04066 -7.89548 -7.76961 -6.99515 -6.86806 -4.41771 1.45124 1.51237 2.35844 2.95587 3.02434 3.09284 3.48877 3.83815 3.89373 4.18949 4.51104 5.12148 5.16484 5.46490 5.62818 5.65641 5.80173 5.91107 6.13080 6.23943 6.36013 6.37867 6.44940 6.48613 6.58609 6.71353 6.78064 6.81078 7.00794 7.14809 7.38922 7.59629 7.62151 7.98565 8.33233 8.69669 9.02401 10.07285 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.015653 B = 0.007727 C = 0.005690 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1788.309498 B = 3622.922588 C = 4919.641551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.113 4.113 3 C -0.109 4.109 4 C 0.107 3.893 5 N -0.397 5.397 6 C -0.337 4.337 7 H 0.109 0.891 8 C 0.085 3.915 9 N -0.815 5.815 10 Si 0.868 3.132 11 H -0.260 1.260 12 H -0.278 1.278 13 H -0.256 1.256 14 C 0.342 3.658 15 C -0.189 4.189 16 C -0.027 4.027 17 C -0.177 4.177 18 Cl -0.071 7.071 19 C 0.149 3.851 20 N -0.190 5.190 21 O -0.582 6.582 22 H 0.044 0.956 23 H 0.048 0.952 24 H 0.051 0.949 25 H 0.062 0.938 26 H 0.046 0.954 27 H 0.042 0.958 28 H 0.084 0.916 29 H 0.102 0.898 30 H 0.054 0.946 31 H 0.285 0.715 32 H 0.162 0.838 33 H 0.140 0.860 34 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.904 1.222 -7.552 7.703 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.151 4.151 3 C -0.147 4.147 4 C -0.014 4.014 5 N -0.084 5.084 6 C -0.465 4.465 7 H 0.126 0.874 8 C -0.130 4.130 9 N -0.443 5.443 10 Si 0.692 3.308 11 H -0.185 1.185 12 H -0.204 1.204 13 H -0.180 1.180 14 C 0.110 3.890 15 C -0.215 4.215 16 C -0.052 4.052 17 C -0.212 4.212 18 Cl -0.043 7.043 19 C -0.001 4.001 20 N 0.111 4.889 21 O -0.628 6.628 22 H 0.063 0.937 23 H 0.067 0.933 24 H 0.070 0.930 25 H 0.081 0.919 26 H 0.065 0.935 27 H 0.060 0.940 28 H 0.102 0.898 29 H 0.120 0.880 30 H 0.072 0.928 31 H 0.096 0.904 32 H 0.180 0.820 33 H 0.158 0.842 34 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.654 0.706 -6.960 7.026 hybrid contribution 0.562 -0.561 -0.114 0.802 sum 1.216 0.145 -7.074 7.179 Atomic orbital electron populations 1.21713 0.96788 1.00364 1.01341 1.21332 0.94888 0.97922 1.00941 1.21918 0.95120 0.95992 1.01699 1.22453 0.95207 0.82477 1.01292 1.43129 1.52078 1.12916 1.00284 1.19029 1.35503 1.00947 0.90998 0.87400 1.25524 0.96444 0.96948 0.94116 1.69924 1.35074 1.40437 0.98891 0.87080 0.82421 0.82358 0.78960 1.18470 1.20367 1.18031 1.18829 0.94273 0.93407 0.82527 1.20908 1.04901 0.97319 0.98323 1.21134 0.95517 0.98299 0.90292 1.20136 1.14337 1.00127 0.86609 1.98303 1.96790 1.87249 1.21985 1.21692 0.96075 0.93365 0.88996 1.42453 1.27329 1.17657 1.01463 1.97384 1.61458 1.09508 1.94419 0.93701 0.93332 0.92979 0.91876 0.93489 0.93963 0.89782 0.88001 0.92781 0.90412 0.82027 0.84219 0.81600 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.33 9.91 37.16 0.37 -1.96 16 2 C -0.11 -2.11 5.93 -26.74 -0.16 -2.27 16 3 C -0.11 -2.38 4.62 -26.73 -0.12 -2.50 16 4 C 0.11 2.48 3.75 -4.04 -0.02 2.46 16 5 N -0.40 -9.24 2.05 -115.00 -0.24 -9.48 16 6 C -0.34 -8.14 8.17 -15.09 -0.12 -8.26 16 7 H 0.11 2.71 7.98 -52.49 -0.42 2.30 16 8 C 0.08 2.05 5.02 -17.45 -0.09 1.96 16 9 N -0.81 -20.39 13.97 55.49 0.77 -19.61 16 10 Si 0.87 18.85 26.86 -169.99 -4.57 14.29 16 11 H -0.26 -5.65 7.11 56.52 0.40 -5.25 16 12 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 13 H -0.26 -5.59 6.01 56.52 0.34 -5.25 16 14 C 0.34 7.37 7.24 -154.85 -1.12 6.25 16 15 C -0.19 -3.43 9.33 -39.20 -0.37 -3.80 16 16 C -0.03 -0.41 9.97 -39.27 -0.39 -0.80 16 17 C -0.18 -2.75 6.35 -39.31 -0.25 -3.00 16 18 Cl -0.07 -0.93 28.99 -51.86 -1.50 -2.43 16 19 C 0.15 2.64 10.49 -17.48 -0.18 2.46 16 20 N -0.19 -4.10 3.59 -12.33 -0.04 -4.14 16 21 O -0.58 -14.36 13.07 -11.47 -0.15 -14.51 16 22 H 0.04 0.62 8.14 -51.93 -0.42 0.20 16 23 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 24 H 0.05 0.85 8.14 -51.93 -0.42 0.42 16 25 H 0.06 1.24 8.14 -51.93 -0.42 0.81 16 26 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 27 H 0.04 0.94 8.14 -51.93 -0.42 0.52 16 28 H 0.08 2.00 6.27 -51.93 -0.33 1.67 16 29 H 0.10 2.49 5.92 -51.93 -0.31 2.18 16 30 H 0.05 1.26 5.02 -51.93 -0.26 1.00 16 31 H 0.29 6.61 8.31 -40.82 -0.34 6.28 16 32 H 0.16 2.86 7.02 -52.49 -0.37 2.49 16 33 H 0.14 1.67 8.06 -52.49 -0.42 1.25 16 34 H 0.17 2.63 8.06 -52.48 -0.42 2.21 16 LS Contribution 295.01 15.07 4.45 4.45 Total: -1.00 -26.83 295.01 -7.99 -34.82 By element: Atomic # 1 Polarization: 10.35 SS G_CDS: -4.26 Total: 6.09 kcal Atomic # 6 Polarization: -7.02 SS G_CDS: -2.45 Total: -9.47 kcal Atomic # 7 Polarization: -33.73 SS G_CDS: 0.50 Total: -33.23 kcal Atomic # 8 Polarization: -14.36 SS G_CDS: -0.15 Total: -14.51 kcal Atomic # 14 Polarization: 18.85 SS G_CDS: -4.57 Total: 14.29 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.50 Total: -2.43 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -26.83 -7.99 -34.82 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001167132248.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.441 kcal (2) G-P(sol) polarization free energy of solvation -26.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.989 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.823 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds