Wall clock time and date at job start Mon Mar 30 2020 01:26:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.36043 * 116.99964 * 2 1 4 4 C 1.38277 * 120.49190 * 359.97438 * 3 2 1 5 5 N 1.32052 * 120.77864 * 180.02562 * 4 3 2 6 6 C 1.32024 * 121.92341 * 0.02562 * 5 4 3 7 7 Cl 1.73596 * 119.55020 * 180.02562 * 6 5 4 8 8 C 1.38164 * 120.90354 * 359.97150 * 6 5 4 9 9 C 1.39246 * 119.11056 * 0.28083 * 8 6 5 10 10 N 1.39450 * 120.86499 * 179.74309 * 9 8 6 11 11 C 1.46498 * 120.00241 * 359.97438 * 10 9 8 12 12 C 1.52995 * 109.47519 * 180.02562 * 11 10 9 13 13 C 1.52999 * 109.47490 * 180.02562 * 12 11 10 14 14 C 1.50699 * 109.47300 * 180.02562 * 13 12 11 15 15 H 1.08000 * 120.00002 * 359.97438 * 14 13 12 16 16 C 1.37874 * 120.00214 * 180.02562 * 14 13 12 17 17 N 1.31517 * 119.99915 * 359.97438 * 16 14 13 18 18 Si 1.86804 * 120.00273 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.46925 * 89.99481 * 18 16 14 20 20 H 1.48493 * 109.47161 * 210.00026 * 18 16 14 21 21 H 1.48497 * 109.47162 * 330.00045 * 18 16 14 22 22 H 1.09005 * 109.47460 * 180.02562 * 1 2 3 23 23 H 1.08995 * 109.47017 * 300.00389 * 1 2 3 24 24 H 1.09002 * 109.47324 * 60.00021 * 1 2 3 25 25 H 1.07997 * 119.60990 * 0.02562 * 4 3 2 26 26 H 1.08002 * 120.44044 * 179.97438 * 8 6 5 27 27 H 0.97003 * 119.99910 * 180.02562 * 10 9 8 28 28 H 1.09001 * 109.47620 * 300.00421 * 11 10 9 29 29 H 1.09005 * 109.47012 * 59.99930 * 11 10 9 30 30 H 1.09001 * 109.46957 * 300.00752 * 12 11 10 31 31 H 1.09005 * 109.47097 * 59.99906 * 12 11 10 32 32 H 1.08997 * 109.47032 * 300.00266 * 13 12 11 33 33 H 1.08997 * 109.46732 * 60.00283 * 13 12 11 34 34 H 0.96993 * 120.00178 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0466 1.2122 0.0000 4 6 1.3035 2.3783 -0.0005 5 7 1.8971 3.5578 -0.0010 6 6 3.2119 3.6777 -0.0016 7 17 3.9274 5.2594 -0.0015 8 6 4.0262 2.5616 -0.0010 9 6 3.4427 1.2973 -0.0059 10 7 4.2298 0.1461 -0.0108 11 6 5.6905 0.2575 -0.0116 12 6 6.3087 -1.1420 -0.0180 13 6 7.8343 -1.0258 -0.0182 14 6 8.4431 -2.4042 -0.0252 15 1 7.8058 -3.2761 -0.0287 16 6 9.8139 -2.5525 -0.0260 17 7 10.5901 -1.4908 -0.0212 18 14 10.5687 -4.2612 -0.0339 19 1 10.7684 -4.7076 -1.4361 20 1 11.8778 -4.2273 0.6661 21 1 9.6597 -5.2071 0.6619 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8899 24 1 -0.3634 0.5138 -0.8900 25 1 0.2249 2.3236 -0.0005 26 1 5.1009 2.6684 -0.0019 27 1 3.8100 -0.7284 -0.0146 28 1 6.0131 0.8008 -0.8997 29 1 6.0145 0.7941 0.8802 30 1 5.9861 -1.6858 0.8699 31 1 5.9847 -1.6783 -0.9101 32 1 8.1571 -0.4819 -0.9059 33 1 8.1578 -0.4898 0.8740 34 1 11.5544 -1.5950 -0.0222 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001168427257.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:26:38 Heat of formation + Delta-G solvation = -23.386077 kcal Electronic energy + Delta-G solvation = -17584.442512 eV Core-core repulsion = 14543.030322 eV Total energy + Delta-G solvation = -3041.412190 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.80551 -38.24111 -36.90930 -36.34861 -33.89826 -32.01238 -30.45974 -29.76663 -27.70021 -26.55037 -23.78127 -22.98582 -21.97788 -20.51056 -18.31971 -17.72204 -17.14182 -16.31658 -16.10942 -14.92740 -14.91610 -14.77302 -14.59743 -14.45624 -14.14199 -14.12232 -12.58252 -12.55023 -12.23185 -12.13146 -11.97999 -11.83281 -11.26823 -11.19662 -11.01783 -10.79290 -10.62123 -10.57707 -9.84804 -9.69858 -9.50783 -9.19060 -8.75847 -8.41980 -7.56173 -6.06843 -4.09927 0.92431 1.32917 1.84112 2.96991 3.28048 3.34484 3.36431 3.40715 3.61471 4.35631 4.40727 4.62914 4.83250 4.90279 5.00322 5.23719 5.29346 5.29585 5.42186 5.48317 5.58068 5.60051 5.98574 6.19908 6.48076 6.49182 6.88062 6.89526 7.25936 7.56266 7.68024 7.68103 7.74365 7.91260 8.32644 8.96396 9.54762 11.04450 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.021144 B = 0.003643 C = 0.003119 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1323.960319 B = 7683.399110 C = 8976.304757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.313 6.313 3 C -0.003 4.003 4 C 0.068 3.932 5 N -0.497 5.497 6 C 0.190 3.810 7 Cl -0.037 7.037 8 C -0.210 4.210 9 C 0.253 3.747 10 N -0.717 5.717 11 C 0.114 3.886 12 C -0.120 4.120 13 C 0.025 3.975 14 C -0.524 4.524 15 H 0.055 0.945 16 C 0.058 3.942 17 N -0.894 5.894 18 Si 0.893 3.107 19 H -0.280 1.280 20 H -0.286 1.286 21 H -0.274 1.274 22 H 0.101 0.899 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.162 0.838 26 H 0.152 0.848 27 H 0.409 0.591 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.055 0.945 31 H 0.055 0.945 32 H 0.019 0.981 33 H 0.019 0.981 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.148 7.306 0.045 20.494 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.226 6.226 3 C -0.054 4.054 4 C -0.087 4.087 5 N -0.213 5.213 6 C 0.024 3.976 7 Cl -0.009 7.009 8 C -0.238 4.238 9 C 0.137 3.863 10 N -0.344 5.344 11 C -0.009 4.009 12 C -0.158 4.158 13 C -0.013 4.013 14 C -0.562 4.562 15 H 0.074 0.926 16 C -0.144 4.144 17 N -0.533 5.533 18 Si 0.721 3.279 19 H -0.206 1.206 20 H -0.212 1.212 21 H -0.199 1.199 22 H 0.119 0.881 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.179 0.821 26 H 0.169 0.831 27 H 0.245 0.755 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.037 0.963 33 H 0.038 0.962 34 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -19.104 8.030 0.051 20.723 hybrid contribution 0.674 -1.677 -0.017 1.808 sum -18.431 6.352 0.034 19.495 Atomic orbital electron populations 1.23051 0.78163 1.04145 1.01302 1.86019 1.21385 1.25440 1.89736 1.19493 0.91066 0.86529 1.08333 1.22362 0.99825 0.85569 1.00931 1.66878 1.10223 1.26935 1.17285 1.21087 0.89531 0.86766 1.00168 1.98388 1.81183 1.24703 1.96616 1.21126 1.01772 0.88872 1.12024 1.17386 0.87101 0.88425 0.93406 1.44961 1.06149 1.05263 1.78060 1.21808 0.77019 1.00785 1.01272 1.21863 1.00109 0.92688 1.01159 1.19030 0.87124 0.97531 0.97615 1.21189 0.91496 0.92442 1.51060 0.92646 1.25017 0.97389 0.96784 0.95175 1.69953 1.04223 1.28602 1.50505 0.86579 0.78663 0.84541 0.78140 1.20625 1.21162 1.19874 0.88079 0.92615 0.92612 0.82104 0.83083 0.75459 0.91891 0.91880 0.92585 0.92584 0.96256 0.96244 0.92883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.19 9.82 101.05 0.99 1.18 16 2 O -0.31 -3.48 9.86 -19.88 -0.20 -3.68 16 3 C 0.00 -0.03 6.73 -38.96 -0.26 -0.29 16 4 C 0.07 0.80 10.21 -17.44 -0.18 0.63 16 5 N -0.50 -6.86 10.33 -10.34 -0.11 -6.96 16 6 C 0.19 2.62 7.27 -17.50 -0.13 2.50 16 7 Cl -0.04 -0.47 29.10 -51.86 -1.51 -1.98 16 8 C -0.21 -2.89 9.15 -39.23 -0.36 -3.25 16 9 C 0.25 3.50 6.71 -83.41 -0.56 2.94 16 10 N -0.72 -10.09 5.72 -58.34 -0.33 -10.42 16 11 C 0.11 1.79 4.95 -4.05 -0.02 1.77 16 12 C -0.12 -2.26 5.27 -26.73 -0.14 -2.41 16 13 C 0.02 0.60 4.97 -27.88 -0.14 0.46 16 14 C -0.52 -14.36 9.11 -34.44 -0.31 -14.67 16 15 H 0.06 1.48 7.74 -52.49 -0.41 1.07 16 16 C 0.06 1.62 5.46 -17.82 -0.10 1.53 16 17 N -0.89 -26.28 13.29 55.43 0.74 -25.54 16 18 Si 0.89 21.22 29.54 -169.99 -5.02 16.20 16 19 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 20 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 21 H -0.27 -6.37 7.11 56.52 0.40 -5.97 16 22 H 0.10 0.50 8.14 -51.93 -0.42 0.08 16 23 H 0.06 0.31 7.68 -51.93 -0.40 -0.08 16 24 H 0.06 0.31 7.68 -51.93 -0.40 -0.08 16 25 H 0.16 1.37 6.31 -52.49 -0.33 1.04 16 26 H 0.15 1.98 6.90 -52.49 -0.36 1.62 16 27 H 0.41 5.48 7.94 -40.82 -0.32 5.16 16 28 H 0.06 0.99 8.00 -51.93 -0.42 0.57 16 29 H 0.06 0.99 8.00 -51.93 -0.42 0.57 16 30 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 31 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 32 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 33 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 34 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 LS Contribution 308.07 15.07 4.64 4.64 Total: -1.00 -30.29 308.07 -7.29 -37.59 By element: Atomic # 1 Polarization: 4.07 SS G_CDS: -4.30 Total: -0.23 kcal Atomic # 6 Polarization: -8.41 SS G_CDS: -1.20 Total: -9.62 kcal Atomic # 7 Polarization: -43.22 SS G_CDS: 0.30 Total: -42.92 kcal Atomic # 8 Polarization: -3.48 SS G_CDS: -0.20 Total: -3.68 kcal Atomic # 14 Polarization: 21.22 SS G_CDS: -5.02 Total: 16.20 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -1.51 Total: -1.98 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -30.29 -7.29 -37.59 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001168427257.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.200 kcal (2) G-P(sol) polarization free energy of solvation -30.294 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.586 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.386 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds