Wall clock time and date at job start Mon Mar 30 2020 00:45:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 N 1.36035 * 126.34450 * 250.05938 * 3 2 1 5 5 C 1.29991 * 109.29551 * 179.68657 * 4 3 2 6 6 N 1.36575 * 109.46334 * 0.44658 * 5 4 3 7 7 C 1.40272 * 126.21330 * 179.81842 * 6 5 4 8 8 C 1.38684 * 120.09754 * 64.67002 * 7 6 5 9 9 C 1.38192 * 120.00172 * 180.02562 * 8 7 6 10 10 C 1.38350 * 120.19987 * 0.02562 * 9 8 7 11 11 C 1.38145 * 120.19382 * 359.70352 * 10 9 8 12 12 C 1.38770 * 119.99270 * 0.55356 * 11 10 9 13 13 O 1.35763 * 120.09824 * 179.74935 * 12 11 10 14 14 C 1.34810 * 117.00241 * 5.59126 * 13 12 11 15 15 H 1.07997 * 119.99730 * 354.94551 * 14 13 12 16 16 C 1.38643 * 120.00435 * 174.66130 * 14 13 12 17 17 N 1.31573 * 119.99609 * 0.28397 * 16 14 13 18 18 Si 1.86795 * 120.00425 * 180.27755 * 16 14 13 19 19 H 1.48504 * 109.46899 * 60.00149 * 18 16 14 20 20 H 1.48496 * 109.47223 * 180.02562 * 18 16 14 21 21 H 1.48503 * 109.46966 * 300.00261 * 18 16 14 22 22 C 1.36703 * 107.56441 * 359.55393 * 6 5 4 23 23 N 1.38251 * 126.81989 * 180.24086 * 22 6 5 24 24 H 1.08002 * 125.26657 * 180.30309 * 5 4 3 25 25 H 1.07998 * 120.00111 * 0.04207 * 8 7 6 26 26 H 1.07996 * 119.89866 * 180.02562 * 9 8 7 27 27 H 1.07998 * 119.90741 * 179.97438 * 10 9 8 28 28 H 1.07998 * 120.00389 * 180.27158 * 11 10 9 29 29 H 0.96999 * 119.99702 * 180.02562 * 17 16 14 30 30 H 0.97007 * 120.00256 * 0.02562 * 23 22 6 31 31 H 0.97003 * 120.00005 * 180.02562 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.3740 0.3747 1.0300 5 6 4.6168 0.2390 0.6741 6 7 4.6746 -0.2213 -0.6105 7 6 5.8404 -0.4878 -1.3437 8 6 6.7005 -1.4979 -0.9395 9 6 7.8487 -1.7583 -1.6630 10 6 8.1446 -1.0137 -2.7909 11 6 7.2907 -0.0093 -3.2040 12 6 6.1382 0.2626 -2.4805 13 8 5.3002 1.2525 -2.8816 14 6 5.5830 1.8566 -4.0532 15 1 6.4876 1.6041 -4.5863 16 6 4.7096 2.7975 -4.5766 17 7 3.6075 3.1051 -3.9271 18 14 5.0976 3.6288 -6.2038 19 1 5.2010 2.6021 -7.2718 20 1 4.0143 4.5870 -6.5409 21 1 6.3862 4.3584 -6.0921 22 6 3.3899 -0.3808 -1.0497 23 7 2.9896 -0.8322 -2.2937 24 1 5.4714 0.4586 1.2969 25 1 6.4728 -2.0811 -0.0595 26 1 8.5171 -2.5455 -1.3470 27 1 9.0434 -1.2210 -3.3525 28 1 7.5225 0.5672 -4.0873 29 1 2.9962 3.7631 -4.2935 30 1 3.6533 -1.0739 -2.9586 31 1 2.0451 -0.9073 -2.5015 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001212597409.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:45:39 Heat of formation + Delta-G solvation = 96.410084 kcal Electronic energy + Delta-G solvation = -19830.732705 eV Core-core repulsion = 16693.407773 eV Total energy + Delta-G solvation = -3137.324932 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -41.66942 -39.24430 -36.81135 -35.84052 -34.38540 -33.29281 -32.55125 -29.65793 -28.62739 -27.80751 -25.68304 -23.11037 -22.54569 -21.62323 -20.35449 -18.55987 -18.32548 -17.45684 -16.45729 -15.77688 -15.54099 -15.07931 -14.75633 -14.35297 -14.11246 -13.99445 -13.83594 -13.43213 -13.00431 -12.49900 -12.43681 -12.08325 -11.94553 -11.68292 -11.33878 -11.15237 -11.11817 -10.73575 -10.67714 -9.95226 -9.79768 -9.31452 -9.09972 -8.41838 -7.62678 -7.01407 -6.70995 -4.32802 1.53944 1.94584 2.33393 2.87168 2.96368 2.97368 3.00393 3.02439 3.21497 3.72316 4.08898 4.22285 4.26821 4.56210 4.74462 4.84489 5.30439 5.32054 5.44507 5.55662 5.70900 5.84300 6.12417 6.28532 6.31042 6.56549 6.71961 6.77883 6.93999 7.02432 7.25945 7.40921 7.66840 7.88844 7.94508 8.18108 8.41409 8.70772 9.29986 10.42857 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.013433 B = 0.008562 C = 0.005674 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2083.903898 B = 3269.569339 C = 4933.914196 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.459 5.459 2 C 0.325 3.675 3 C -0.071 4.071 4 N -0.434 5.434 5 C 0.187 3.813 6 N -0.409 5.409 7 C 0.006 3.994 8 C -0.051 4.051 9 C -0.209 4.209 10 C -0.057 4.057 11 C -0.225 4.225 12 C 0.153 3.847 13 O -0.151 6.151 14 C -0.402 4.402 15 H 0.095 0.905 16 C 0.047 3.953 17 N -0.839 5.839 18 Si 0.942 3.058 19 H -0.268 1.268 20 H -0.276 1.276 21 H -0.268 1.268 22 C 0.396 3.604 23 N -0.824 5.824 24 H 0.209 0.791 25 H 0.122 0.878 26 H 0.116 0.884 27 H 0.115 0.885 28 H 0.136 0.864 29 H 0.275 0.725 30 H 0.406 0.594 31 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.792 -7.717 0.370 10.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.139 5.139 2 C 0.012 3.988 3 C -0.200 4.200 4 N -0.151 5.151 5 C -0.097 4.097 6 N -0.098 5.098 7 C -0.086 4.086 8 C -0.071 4.071 9 C -0.229 4.229 10 C -0.075 4.075 11 C -0.245 4.245 12 C 0.095 3.905 13 O -0.052 6.052 14 C -0.478 4.478 15 H 0.113 0.887 16 C -0.161 4.161 17 N -0.471 5.471 18 Si 0.766 3.234 19 H -0.193 1.193 20 H -0.201 1.201 21 H -0.193 1.193 22 C 0.168 3.832 23 N -0.368 5.368 24 H 0.226 0.774 25 H 0.140 0.860 26 H 0.135 0.865 27 H 0.133 0.867 28 H 0.153 0.847 29 H 0.085 0.915 30 H 0.236 0.764 31 H 0.246 0.754 Dipole moment (debyes) X Y Z Total from point charges 5.378 -7.111 1.242 9.001 hybrid contribution 1.108 0.261 -2.026 2.324 sum 6.486 -6.850 -0.784 9.466 Atomic orbital electron populations 1.81170 1.11329 1.13089 1.08274 1.23880 0.90418 0.91666 0.92873 1.14948 0.85667 1.25860 0.93551 1.70312 1.00061 1.17737 1.27026 1.24682 0.96181 1.05167 0.83652 1.42081 1.02591 1.52122 1.12965 1.16681 0.90928 1.03065 0.97913 1.20677 0.93577 0.93962 0.98872 1.20509 0.99199 1.04255 0.98891 1.20941 0.97627 0.93784 0.95165 1.21111 0.96414 1.03092 1.03905 1.19333 0.90706 0.87865 0.92560 1.84027 1.44883 1.39309 1.36991 1.21329 1.08333 1.21785 0.96326 0.88743 1.25347 0.94736 0.96490 0.99506 1.70047 1.09556 1.29826 1.37646 0.85767 0.78670 0.79123 0.79880 1.19337 1.20089 1.19290 1.17905 0.84178 0.94042 0.87058 1.41177 1.10846 1.73572 1.11237 0.77405 0.85982 0.86548 0.86708 0.84689 0.91471 0.76390 0.75422 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -9.46 18.54 41.84 0.78 -8.68 16 2 C 0.33 6.53 15.65 -22.47 -0.35 6.18 16 3 C -0.07 -1.40 6.96 -83.92 -0.58 -1.99 16 4 N -0.43 -8.40 11.30 -11.45 -0.13 -8.53 16 5 C 0.19 3.20 12.44 -89.38 -1.11 2.08 16 6 N -0.41 -7.41 2.62 -60.58 -0.16 -7.57 16 7 C 0.01 0.10 5.48 -83.38 -0.46 -0.36 16 8 C -0.05 -0.74 9.90 -39.43 -0.39 -1.13 16 9 C -0.21 -2.79 10.04 -39.56 -0.40 -3.19 16 10 C -0.06 -0.81 10.04 -39.57 -0.40 -1.21 16 11 C -0.23 -3.97 9.16 -39.42 -0.36 -4.33 16 12 C 0.15 3.07 6.47 -38.94 -0.25 2.81 16 13 O -0.15 -3.67 9.19 0.07 0.00 -3.67 16 14 C -0.40 -9.81 9.49 30.88 0.29 -9.52 16 15 H 0.10 2.10 5.21 -52.49 -0.27 1.82 16 16 C 0.05 1.16 5.49 -17.51 -0.10 1.07 16 17 N -0.84 -22.61 13.67 55.48 0.76 -21.86 16 18 Si 0.94 18.71 29.55 -169.99 -5.02 13.69 16 19 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 20 H -0.28 -5.49 7.11 56.52 0.40 -5.09 16 21 H -0.27 -5.19 7.11 56.52 0.40 -4.79 16 22 C 0.40 7.47 7.63 -152.10 -1.16 6.31 16 23 N -0.82 -13.84 9.06 31.67 0.29 -13.55 16 24 H 0.21 2.70 8.06 -52.49 -0.42 2.28 16 25 H 0.12 1.50 8.06 -52.49 -0.42 1.07 16 26 H 0.12 1.24 8.06 -52.49 -0.42 0.82 16 27 H 0.11 1.32 8.06 -52.49 -0.42 0.90 16 28 H 0.14 2.39 5.64 -52.49 -0.30 2.09 16 29 H 0.28 6.97 8.31 -40.82 -0.34 6.63 16 30 H 0.41 6.71 8.46 -40.82 -0.35 6.37 16 31 H 0.41 6.27 8.69 -40.82 -0.35 5.91 16 LS Contribution 292.56 15.07 4.41 4.41 Total: -1.00 -29.31 292.56 -6.44 -35.75 By element: Atomic # 1 Polarization: 15.37 SS G_CDS: -2.10 Total: 13.28 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -5.27 Total: -3.27 kcal Atomic # 7 Polarization: -61.72 SS G_CDS: 1.53 Total: -60.19 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: 0.00 Total: -3.67 kcal Atomic # 14 Polarization: 18.71 SS G_CDS: -5.02 Total: 13.69 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -29.31 -6.44 -35.75 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001212597409.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.162 kcal (2) G-P(sol) polarization free energy of solvation -29.309 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.752 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds