Wall clock time and date at job start Mon Mar 30 2020 00:55:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52998 * 109.47166 * 2 1 4 4 C 1.50700 * 109.47029 * 119.99983 * 2 1 3 5 5 N 1.31786 * 119.09435 * 299.98179 * 4 2 1 6 6 C 1.32491 * 120.96444 * 180.02562 * 5 4 2 7 7 C 1.38230 * 119.17432 * 359.71429 * 6 5 4 8 8 C 1.39377 * 118.34868 * 0.54761 * 7 6 5 9 9 O 1.35526 * 120.50704 * 179.73510 * 8 7 6 10 10 C 1.42904 * 116.99449 * 179.72212 * 9 8 7 11 11 H 1.08998 * 109.47214 * 29.99497 * 10 9 8 12 12 C 1.50695 * 109.46709 * 149.99822 * 10 9 8 13 13 H 1.07999 * 120.00306 * 5.31452 * 12 10 9 14 14 C 1.37877 * 120.00026 * 185.31816 * 12 10 9 15 15 N 1.31517 * 119.99880 * 5.57226 * 14 12 10 16 16 Si 1.86802 * 120.00350 * 185.30117 * 14 12 10 17 17 H 1.48493 * 109.47251 * 84.99740 * 16 14 12 18 18 H 1.48502 * 109.46987 * 204.99718 * 16 14 12 19 19 H 1.48500 * 109.46658 * 324.99605 * 16 14 12 20 20 C 1.53004 * 109.46783 * 269.99419 * 10 9 8 21 21 Cl 1.80299 * 109.47239 * 65.67184 * 20 10 9 22 22 N 1.31765 * 119.09288 * 119.99765 * 4 2 1 23 23 H 1.08996 * 109.47138 * 300.00129 * 1 2 3 24 24 H 1.09003 * 109.46968 * 59.99898 * 1 2 3 25 25 H 1.08997 * 109.47280 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46824 * 240.00210 * 2 1 3 27 27 H 1.09000 * 109.47322 * 180.02562 * 3 2 1 28 28 H 1.09003 * 109.47261 * 299.99923 * 3 2 1 29 29 H 1.09004 * 109.47181 * 59.99605 * 3 2 1 30 30 H 1.08006 * 120.40954 * 180.02562 * 6 5 4 31 31 H 1.08003 * 120.82206 * 180.27162 * 7 6 5 32 32 H 0.96999 * 120.00508 * 179.72934 * 15 14 12 33 33 H 1.08997 * 109.46922 * 185.66828 * 20 10 9 34 34 H 1.09005 * 109.47215 * 305.67255 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 1.2305 5 7 1.7034 -0.2446 2.4185 6 6 2.1248 -0.8397 3.5247 7 6 2.9159 -1.9686 3.4230 8 6 3.2493 -2.4307 2.1511 9 8 4.0270 -3.5304 2.0006 10 6 4.3172 -3.9415 0.6631 11 1 4.3294 -3.0694 0.0094 12 6 5.6643 -4.6160 0.6261 13 1 6.2028 -4.7973 1.5445 14 6 6.2093 -5.0016 -0.5802 15 7 5.6070 -4.6840 -1.7054 16 14 7.8072 -5.9686 -0.6169 17 1 7.5146 -7.4147 -0.4489 18 1 8.4887 -5.7493 -1.9179 19 1 8.6884 -5.5103 0.4871 20 6 3.2430 -4.9212 0.1863 21 17 1.6591 -4.0674 0.0716 22 7 2.7886 -1.7801 1.0888 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3634 -1.0276 -0.0005 26 1 1.8933 -0.5138 -0.8900 27 1 3.1300 1.4425 -0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6766 1.9564 0.8900 30 1 1.8494 -0.4504 4.4938 31 1 3.2705 -2.4773 4.3073 32 1 5.9924 -4.9519 -2.5543 33 1 3.5169 -5.3120 -0.7937 34 1 3.1614 -5.7446 0.8959 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001233797567.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:55:57 Heat of formation + Delta-G solvation = -16.490547 kcal Electronic energy + Delta-G solvation = -18887.070944 eV Core-core repulsion = 15845.957766 eV Total energy + Delta-G solvation = -3041.113177 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.64774 -37.95003 -35.20101 -34.72698 -33.47256 -32.48221 -30.61450 -29.15711 -26.95640 -25.31187 -24.18318 -23.83706 -21.23814 -20.32254 -17.55557 -17.30357 -16.44106 -15.27812 -14.99680 -14.85639 -14.70809 -13.96636 -13.72432 -13.66076 -13.28366 -12.95047 -12.57316 -12.11392 -11.97054 -11.74192 -11.53019 -11.17851 -11.10243 -10.99502 -10.79499 -10.66261 -10.41569 -10.14995 -10.07947 -9.53755 -9.39629 -9.04130 -8.79597 -8.58374 -8.18365 -6.41111 -4.49418 1.46097 1.80301 3.13147 3.20368 3.23382 3.43364 3.79914 4.20219 4.31402 4.34304 4.62692 4.94090 5.23503 5.39356 5.41502 5.45607 5.60487 5.81680 5.87408 5.96892 6.03548 6.05451 6.17777 6.20600 6.29891 6.42610 6.46257 6.72318 6.91924 7.21252 7.46695 7.57534 7.77849 8.16002 8.60936 8.73326 9.17200 10.66484 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.022979 B = 0.006089 C = 0.005858 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1218.208026 B = 4597.284057 C = 4778.451910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.027 4.027 3 C -0.137 4.137 4 C 0.356 3.644 5 N -0.554 5.554 6 C 0.162 3.838 7 C -0.269 4.269 8 C 0.382 3.618 9 O -0.297 6.297 10 C 0.209 3.791 11 H 0.074 0.926 12 C -0.530 4.530 13 H 0.074 0.926 14 C 0.067 3.933 15 N -0.880 5.880 16 Si 0.913 3.087 17 H -0.275 1.275 18 H -0.282 1.282 19 H -0.270 1.270 20 C -0.026 4.026 21 Cl -0.229 7.229 22 N -0.538 5.538 23 H 0.063 0.937 24 H 0.060 0.940 25 H 0.051 0.949 26 H 0.096 0.904 27 H 0.052 0.948 28 H 0.060 0.940 29 H 0.064 0.936 30 H 0.163 0.837 31 H 0.142 0.858 32 H 0.271 0.729 33 H 0.117 0.883 34 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.747 6.471 4.519 10.384 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.047 4.047 3 C -0.195 4.195 4 C 0.088 3.912 5 N -0.274 5.274 6 C -0.001 4.001 7 C -0.293 4.293 8 C 0.195 3.805 9 O -0.199 6.199 10 C 0.155 3.845 11 H 0.092 0.908 12 C -0.568 4.568 13 H 0.092 0.908 14 C -0.137 4.137 15 N -0.515 5.515 16 Si 0.739 3.261 17 H -0.201 1.201 18 H -0.208 1.208 19 H -0.195 1.195 20 C -0.089 4.089 21 Cl -0.203 7.203 22 N -0.267 5.267 23 H 0.082 0.918 24 H 0.079 0.921 25 H 0.071 0.929 26 H 0.114 0.886 27 H 0.072 0.928 28 H 0.079 0.921 29 H 0.083 0.917 30 H 0.180 0.820 31 H 0.160 0.840 32 H 0.081 0.919 33 H 0.135 0.865 34 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -6.962 6.678 3.690 10.329 hybrid contribution 1.083 -1.195 0.503 1.689 sum -5.879 5.484 4.193 9.067 Atomic orbital electron populations 1.21729 0.93586 1.01925 1.02104 1.19907 0.96123 0.95463 0.93205 1.21755 1.01032 0.94520 1.02194 1.22710 0.88464 0.87326 0.92696 1.68078 1.26665 1.34047 0.98623 1.22785 0.90086 0.89875 0.97309 1.21852 1.07780 1.02398 0.97305 1.20270 0.85161 0.85767 0.89333 1.86304 1.60576 1.37445 1.35616 1.20554 0.92266 0.95271 0.76438 0.90810 1.20947 1.00976 1.40643 0.94197 0.90807 1.24974 0.98304 0.95616 0.94855 1.69941 1.40006 1.43844 0.97759 0.86252 0.81979 0.80040 0.77786 1.20063 1.20779 1.19483 1.25473 0.80601 0.97332 1.05468 1.98642 1.40311 1.82297 1.99090 1.68213 1.15007 1.09946 1.33542 0.91757 0.92143 0.92945 0.88575 0.92838 0.92093 0.91707 0.81979 0.83990 0.91884 0.86453 0.91110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.81 9.09 37.16 0.34 -1.47 16 2 C -0.03 -0.41 3.25 -91.77 -0.30 -0.71 16 3 C -0.14 -1.79 9.09 37.16 0.34 -1.45 16 4 C 0.36 6.49 6.34 -157.23 -1.00 5.49 16 5 N -0.55 -9.28 9.80 -10.79 -0.11 -9.38 16 6 C 0.16 2.44 11.29 -17.27 -0.20 2.24 16 7 C -0.27 -4.59 10.13 -39.16 -0.40 -4.98 16 8 C 0.38 8.02 6.69 -16.70 -0.11 7.91 16 9 O -0.30 -6.95 9.75 -18.27 -0.18 -7.13 16 10 C 0.21 5.24 2.12 -27.88 -0.06 5.18 16 11 H 0.07 2.04 7.00 -51.93 -0.36 1.67 16 12 C -0.53 -13.99 8.82 -34.44 -0.30 -14.29 16 13 H 0.07 1.94 7.82 -52.49 -0.41 1.53 16 14 C 0.07 1.73 5.22 -17.82 -0.09 1.64 16 15 N -0.88 -23.47 11.96 55.43 0.66 -22.81 16 16 Si 0.91 20.00 29.54 -169.99 -5.02 14.98 16 17 H -0.27 -5.92 7.11 56.52 0.40 -5.51 16 18 H -0.28 -6.13 7.11 56.52 0.40 -5.73 16 19 H -0.27 -5.89 7.11 56.52 0.40 -5.49 16 20 C -0.03 -0.60 6.22 37.16 0.23 -0.37 16 21 Cl -0.23 -4.93 25.95 -51.86 -1.35 -6.27 16 22 N -0.54 -11.27 6.42 -10.78 -0.07 -11.34 16 23 H 0.06 0.84 8.01 -51.93 -0.42 0.42 16 24 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.05 0.77 8.14 -51.93 -0.42 0.34 16 26 H 0.10 1.60 8.10 -51.93 -0.42 1.18 16 27 H 0.05 0.74 8.14 -51.93 -0.42 0.32 16 28 H 0.06 0.66 8.14 -51.93 -0.42 0.23 16 29 H 0.06 0.83 8.01 -51.93 -0.42 0.41 16 30 H 0.16 1.73 8.06 -52.48 -0.42 1.31 16 31 H 0.14 2.07 8.06 -52.48 -0.42 1.65 16 32 H 0.27 6.84 8.31 -40.82 -0.34 6.50 16 33 H 0.12 2.90 6.62 -51.93 -0.34 2.56 16 34 H 0.07 1.57 8.14 -51.93 -0.42 1.15 16 LS Contribution 303.69 15.07 4.58 4.58 Total: -1.00 -27.89 303.69 -7.49 -35.39 By element: Atomic # 1 Polarization: 7.27 SS G_CDS: -4.46 Total: 2.80 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -1.55 Total: -0.81 kcal Atomic # 7 Polarization: -44.02 SS G_CDS: 0.49 Total: -43.53 kcal Atomic # 8 Polarization: -6.95 SS G_CDS: -0.18 Total: -7.13 kcal Atomic # 14 Polarization: 20.00 SS G_CDS: -5.02 Total: 14.98 kcal Atomic # 17 Polarization: -4.93 SS G_CDS: -1.35 Total: -6.27 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -27.89 -7.49 -35.39 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001233797567.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.897 kcal (2) G-P(sol) polarization free energy of solvation -27.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.493 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.491 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds