Wall clock time and date at job start Mon Mar 30 2020 00:55:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53002 * 109.47004 * 2 1 4 4 C 1.50701 * 109.47325 * 120.00494 * 2 1 3 5 5 C 1.38760 * 120.01113 * 274.99739 * 4 2 1 6 6 C 1.38638 * 118.01886 * 179.97438 * 5 4 2 7 7 C 1.39266 * 117.91984 * 0.02562 * 6 5 4 8 8 O 1.35692 * 120.13919 * 179.97438 * 7 6 5 9 9 C 1.42899 * 116.99998 * 180.02562 * 8 7 6 10 10 H 1.08999 * 109.47469 * 30.00558 * 9 8 7 11 11 C 1.50709 * 109.47151 * 150.00340 * 9 8 7 12 12 H 1.07992 * 120.00020 * 95.12271 * 11 9 8 13 13 C 1.37879 * 119.99294 * 275.12512 * 11 9 8 14 14 N 1.31506 * 120.00602 * 355.67605 * 13 11 9 15 15 Si 1.86803 * 119.99461 * 175.68004 * 13 11 9 16 16 H 1.48495 * 109.47130 * 59.99705 * 15 13 11 17 17 H 1.48503 * 109.47008 * 179.97438 * 15 13 11 18 18 H 1.48501 * 109.47173 * 299.99703 * 15 13 11 19 19 C 1.52997 * 109.47465 * 270.00032 * 9 8 7 20 20 Cl 1.80298 * 109.47009 * 65.71854 * 19 9 8 21 21 N 1.32347 * 119.72380 * 0.25350 * 7 6 5 22 22 N 1.28346 * 122.09452 * 359.46740 * 21 7 6 23 23 H 1.08998 * 109.46540 * 299.99646 * 1 2 3 24 24 H 1.09000 * 109.47219 * 59.99530 * 1 2 3 25 25 H 1.09004 * 109.46890 * 179.97438 * 1 2 3 26 26 H 1.09008 * 109.46723 * 240.00432 * 2 1 3 27 27 H 1.08996 * 109.46680 * 60.00791 * 3 2 1 28 28 H 1.09002 * 109.46945 * 180.02562 * 3 2 1 29 29 H 1.08996 * 109.47039 * 300.00291 * 3 2 1 30 30 H 1.07996 * 120.98923 * 0.02562 * 5 4 2 31 31 H 1.08001 * 121.04083 * 180.02562 * 6 5 4 32 32 H 0.96998 * 120.00181 * 5.56864 * 14 13 11 33 33 H 1.08997 * 109.47393 * 185.71888 * 19 9 8 34 34 H 1.09003 * 109.47057 * 305.71976 * 19 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0324 -0.7105 1.2304 5 6 2.1651 -0.0186 2.4258 6 6 2.6304 -0.7128 3.5320 7 6 2.9363 -2.0622 3.3737 8 8 3.3956 -2.7848 4.4264 9 6 3.6889 -4.1630 4.1887 10 1 4.0011 -4.2947 3.1527 11 6 4.7980 -4.6064 5.1077 12 1 4.5624 -5.0866 6.0458 13 6 6.1135 -4.3988 4.7506 14 7 6.4029 -3.8920 3.5722 15 14 7.4847 -4.8377 5.9409 16 1 7.4225 -6.2878 6.2546 17 1 8.7972 -4.5213 5.3224 18 1 7.3244 -4.0533 7.1916 19 6 2.4389 -5.0039 4.4554 20 17 1.1671 -4.5904 3.2461 21 7 2.7824 -2.6356 2.1908 22 7 2.3464 -1.9893 1.1713 23 1 -0.3632 0.5138 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 1.8933 -0.5138 -0.8901 27 1 1.6767 1.9562 0.8900 28 1 3.1300 1.4425 -0.0005 29 1 1.6766 1.9563 -0.8899 30 1 1.9126 1.0293 2.4928 31 1 2.7519 -0.2226 4.4866 32 1 5.6915 -3.5892 2.9864 33 1 2.6882 -6.0618 4.3731 34 1 2.0678 -4.7950 5.4588 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001233887828.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:55:53 Heat of formation + Delta-G solvation = -10.960353 kcal Electronic energy + Delta-G solvation = -18756.158119 eV Core-core repulsion = 15715.284749 eV Total energy + Delta-G solvation = -3040.873370 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.60506 -37.92647 -35.64254 -35.02998 -33.48853 -32.30895 -30.33792 -29.37692 -27.25087 -24.86481 -24.18128 -23.90795 -21.43555 -20.50699 -18.03302 -17.36087 -16.57463 -15.78924 -15.25327 -14.37937 -14.24826 -14.00179 -13.88528 -13.71163 -13.22339 -13.01633 -12.79354 -12.22567 -12.15329 -11.97584 -11.90063 -11.41147 -11.12960 -10.99988 -10.96934 -10.52084 -10.41288 -10.24694 -9.79497 -9.63412 -9.54072 -9.15293 -8.91597 -8.59139 -7.94936 -6.76215 -4.61068 1.34000 1.66765 3.06952 3.26929 3.31446 3.49673 3.88475 4.16916 4.29650 4.46589 4.81076 4.95567 5.07872 5.16125 5.26023 5.28620 5.39648 5.55967 5.66968 5.74463 5.77402 5.84326 5.89417 5.92505 6.08698 6.17608 6.22225 6.24906 6.50901 6.69301 6.85803 7.56309 8.01435 8.29966 8.43038 9.20520 9.39997 10.60919 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.023389 B = 0.005962 C = 0.005135 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1196.851200 B = 4695.036290 C = 5451.435462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.032 4.032 3 C -0.147 4.147 4 C 0.013 3.987 5 C -0.092 4.092 6 C -0.154 4.154 7 C 0.277 3.723 8 O -0.301 6.301 9 C 0.178 3.822 10 H 0.072 0.928 11 C -0.598 4.598 12 H 0.065 0.935 13 C 0.036 3.964 14 N -0.873 5.873 15 Si 1.076 2.924 16 H -0.282 1.282 17 H -0.278 1.278 18 H -0.282 1.282 19 C -0.029 4.029 20 Cl -0.208 7.208 21 N -0.275 5.275 22 N -0.205 5.205 23 H 0.053 0.947 24 H 0.059 0.941 25 H 0.058 0.942 26 H 0.088 0.912 27 H 0.057 0.943 28 H 0.058 0.942 29 H 0.061 0.939 30 H 0.143 0.857 31 H 0.145 0.855 32 H 0.278 0.722 33 H 0.097 0.903 34 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.608 7.916 -2.722 12.007 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C -0.052 4.052 3 C -0.204 4.204 4 C -0.134 4.134 5 C -0.120 4.120 6 C -0.184 4.184 7 C 0.093 3.907 8 O -0.205 6.205 9 C 0.125 3.875 10 H 0.090 0.910 11 C -0.634 4.634 12 H 0.083 0.917 13 C -0.174 4.174 14 N -0.506 5.506 15 Si 0.902 3.098 16 H -0.208 1.208 17 H -0.203 1.203 18 H -0.208 1.208 19 C -0.092 4.092 20 Cl -0.182 7.182 21 N -0.133 5.133 22 N -0.050 5.050 23 H 0.073 0.927 24 H 0.078 0.922 25 H 0.077 0.923 26 H 0.106 0.894 27 H 0.076 0.924 28 H 0.077 0.923 29 H 0.080 0.920 30 H 0.160 0.840 31 H 0.162 0.838 32 H 0.090 0.910 33 H 0.116 0.884 34 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -6.856 6.492 -3.200 9.970 hybrid contribution -1.927 1.320 0.764 2.458 sum -8.783 7.812 -2.436 12.004 Atomic orbital electron populations 1.21806 0.94121 1.02281 1.01623 1.19796 0.95723 0.94998 0.94714 1.21909 1.01485 0.95113 1.01935 1.22430 1.01983 0.93189 0.95839 1.21956 0.96968 1.00989 0.92106 1.21595 1.02733 0.93161 1.00904 1.21888 0.88788 0.90415 0.89630 1.86872 1.75021 1.27639 1.30998 1.20763 0.90578 0.75013 1.01147 0.91001 1.21888 0.91081 1.42274 1.08205 0.91696 1.26209 0.99855 0.93280 0.98100 1.70756 1.37901 1.34847 1.07075 0.83446 0.75204 0.76635 0.74513 1.20779 1.20295 1.20820 1.25117 0.89251 1.02538 0.92260 1.98682 1.60153 1.95208 1.64149 1.73269 1.14633 1.29187 0.96204 1.72666 1.05335 1.06241 1.20712 0.92749 0.92163 0.92319 0.89358 0.92369 0.92308 0.92012 0.83965 0.83758 0.90991 0.88421 0.90017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.53 9.18 37.16 0.34 -1.19 16 2 C -0.03 -0.40 3.25 -91.77 -0.30 -0.70 16 3 C -0.15 -1.44 8.63 37.16 0.32 -1.12 16 4 C 0.01 0.21 5.87 -82.41 -0.48 -0.27 16 5 C -0.09 -1.41 9.26 -39.24 -0.36 -1.77 16 6 C -0.15 -2.79 10.16 -39.05 -0.40 -3.19 16 7 C 0.28 6.20 6.74 -16.95 -0.11 6.09 16 8 O -0.30 -7.45 9.75 -18.78 -0.18 -7.63 16 9 C 0.18 4.46 1.96 -27.88 -0.05 4.40 16 10 H 0.07 1.98 5.55 -51.93 -0.29 1.69 16 11 C -0.60 -15.93 8.69 -34.44 -0.30 -16.22 16 12 H 0.06 1.66 7.81 -52.49 -0.41 1.25 16 13 C 0.04 0.97 5.46 -17.82 -0.10 0.88 16 14 N -0.87 -25.54 13.62 55.43 0.75 -24.78 16 15 Si 1.08 23.50 29.91 -169.99 -5.08 18.42 16 16 H -0.28 -5.79 7.11 56.52 0.40 -5.39 16 17 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 18 H -0.28 -5.90 7.11 56.52 0.40 -5.50 16 19 C -0.03 -0.61 6.31 37.16 0.23 -0.38 16 20 Cl -0.21 -4.33 25.96 -51.86 -1.35 -5.67 16 21 N -0.28 -6.29 7.58 30.50 0.23 -6.06 16 22 N -0.21 -4.22 11.42 33.60 0.38 -3.84 16 23 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 24 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 25 H 0.06 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.09 1.13 8.14 -51.92 -0.42 0.71 16 27 H 0.06 0.51 6.55 -51.93 -0.34 0.17 16 28 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 29 H 0.06 0.50 8.14 -51.93 -0.42 0.07 16 30 H 0.14 1.60 6.41 -52.49 -0.34 1.27 16 31 H 0.14 2.27 8.06 -52.49 -0.42 1.85 16 32 H 0.28 8.35 6.67 -40.82 -0.27 8.08 16 33 H 0.10 1.96 8.14 -51.93 -0.42 1.53 16 34 H 0.08 1.64 8.14 -51.93 -0.42 1.22 16 LS Contribution 301.24 15.07 4.54 4.54 Total: -1.00 -30.35 301.24 -6.16 -36.52 By element: Atomic # 1 Polarization: 6.23 SS G_CDS: -4.25 Total: 1.98 kcal Atomic # 6 Polarization: -12.26 SS G_CDS: -1.21 Total: -13.47 kcal Atomic # 7 Polarization: -36.05 SS G_CDS: 1.37 Total: -34.68 kcal Atomic # 8 Polarization: -7.45 SS G_CDS: -0.18 Total: -7.63 kcal Atomic # 14 Polarization: 23.50 SS G_CDS: -5.08 Total: 18.42 kcal Atomic # 17 Polarization: -4.33 SS G_CDS: -1.35 Total: -5.67 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -30.35 -6.16 -36.52 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001233887828.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.557 kcal (2) G-P(sol) polarization free energy of solvation -30.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.517 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.960 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds