Wall clock time and date at job start Mon Mar 30 2020 01:24:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35676 * 117.00047 * 2 1 4 4 C 1.38885 * 119.67873 * 180.02562 * 3 2 1 5 5 C 1.38419 * 119.14440 * 179.72122 * 4 3 2 6 6 C 1.38760 * 118.49786 * 0.49402 * 5 4 3 7 7 C 1.50704 * 120.36351 * 179.78259 * 6 5 4 8 8 N 1.46893 * 109.47295 * 104.71619 * 7 6 5 9 9 C 1.46901 * 111.00360 * 293.95434 * 8 7 6 10 10 C 1.46906 * 110.99932 * 170.00151 * 8 7 6 11 11 C 1.50703 * 109.47109 * 190.00029 * 10 8 7 12 12 H 1.08005 * 119.99876 * 0.02562 * 11 10 8 13 13 C 1.37875 * 119.99989 * 180.02562 * 11 10 8 14 14 N 1.31518 * 119.99944 * 359.97438 * 13 11 10 15 15 Si 1.86798 * 119.99979 * 180.02562 * 13 11 10 16 16 H 1.48493 * 109.47285 * 359.97438 * 15 13 11 17 17 H 1.48504 * 109.47233 * 119.99722 * 15 13 11 18 18 H 1.48500 * 109.46790 * 239.99650 * 15 13 11 19 19 C 1.38221 * 119.27954 * 359.50258 * 6 5 4 20 20 Cl 1.73603 * 119.60211 * 180.23410 * 19 6 5 21 21 N 1.32055 * 120.80028 * 0.25359 * 19 6 5 22 22 H 1.09000 * 109.46702 * 60.00453 * 1 2 3 23 23 H 1.09004 * 109.46999 * 180.02562 * 1 2 3 24 24 H 1.08997 * 109.47549 * 300.00723 * 1 2 3 25 25 H 1.08006 * 120.42733 * 359.97265 * 4 3 2 26 26 H 1.08002 * 120.75235 * 180.27101 * 5 4 3 27 27 H 1.09004 * 109.46439 * 344.71605 * 7 6 5 28 28 H 1.08994 * 109.47235 * 224.72406 * 7 6 5 29 29 H 1.08995 * 109.47046 * 296.04847 * 9 8 7 30 30 H 1.09008 * 109.46903 * 56.04730 * 9 8 7 31 31 H 1.08999 * 109.47457 * 176.04446 * 9 8 7 32 32 H 1.08992 * 109.47459 * 309.99948 * 10 8 7 33 33 H 1.09004 * 109.47040 * 70.00098 * 10 8 7 34 34 H 0.96997 * 119.99752 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2089 0.0000 4 6 3.4323 1.2738 -0.0005 5 6 4.0492 2.5129 -0.0064 6 6 3.2526 3.6491 -0.0011 7 6 3.8800 5.0193 -0.0022 8 7 3.7576 5.6128 -1.3403 9 6 4.5520 4.8639 -2.3231 10 6 4.1408 7.0309 -1.3243 11 6 3.7733 7.6655 -2.6408 12 1 3.3017 7.0746 -3.4121 13 6 4.0389 9.0004 -2.8606 14 7 4.6127 9.7201 -1.9212 15 14 3.5827 9.7872 -4.4923 16 1 2.9535 8.7708 -5.3732 17 1 2.6262 10.8982 -4.2558 18 1 4.8064 10.3180 -5.1451 19 6 1.8773 3.5105 -0.0006 20 17 0.8728 4.9263 0.0000 21 7 1.3183 2.3141 -0.0001 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 4.0222 0.3690 -0.0005 26 1 5.1261 2.5936 -0.0114 27 1 4.9339 4.9365 0.2636 28 1 3.3709 5.6526 0.7242 29 1 5.6091 4.9374 -2.0677 30 1 4.2480 3.8171 -2.3143 31 1 4.3884 5.2814 -3.3166 32 1 3.6155 7.5401 -0.5164 33 1 5.2163 7.1149 -1.1681 34 1 4.7992 10.6593 -2.0757 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001237794120.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:24:35 Heat of formation + Delta-G solvation = -1.146708 kcal Electronic energy + Delta-G solvation = -18289.044596 eV Core-core repulsion = 15248.596777 eV Total energy + Delta-G solvation = -3040.447819 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.71002 -38.32349 -36.40094 -36.17828 -32.98053 -32.26028 -30.96447 -27.82400 -27.09697 -26.26912 -24.10936 -23.33329 -21.91567 -20.24127 -18.52979 -17.36277 -16.41680 -16.15669 -15.25036 -15.02154 -14.82747 -14.64351 -14.27102 -13.86498 -13.48014 -13.41566 -12.99557 -12.14812 -11.93791 -11.84658 -11.84408 -11.37171 -11.17579 -10.94372 -10.83625 -10.64796 -10.59723 -10.47684 -9.88215 -9.77204 -9.74372 -9.20159 -8.43498 -8.29199 -7.25481 -6.01772 -4.02344 1.00592 1.19723 2.07432 2.99871 3.31897 3.39526 3.44619 3.62258 4.43372 4.46930 4.80826 4.86076 5.03196 5.15385 5.20200 5.22136 5.33297 5.36104 5.50254 5.64027 5.90940 6.04345 6.14956 6.20991 6.30343 6.36457 6.73590 7.06357 7.27484 7.32321 7.63904 7.80580 8.07465 8.18459 8.53736 9.05482 9.61772 11.09191 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.030815 B = 0.004594 C = 0.004405 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 908.415578 B = 6094.057139 C = 6355.524100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 O -0.308 6.308 3 C 0.327 3.673 4 C -0.190 4.190 5 C -0.029 4.029 6 C -0.134 4.134 7 C 0.096 3.904 8 N -0.529 5.529 9 C 0.038 3.962 10 C 0.195 3.805 11 C -0.503 4.503 12 H 0.064 0.936 13 C 0.055 3.945 14 N -0.899 5.899 15 Si 0.896 3.104 16 H -0.272 1.272 17 H -0.284 1.284 18 H -0.285 1.285 19 C 0.232 3.768 20 Cl -0.004 7.004 21 N -0.540 5.540 22 H 0.060 0.940 23 H 0.094 0.906 24 H 0.059 0.941 25 H 0.144 0.856 26 H 0.148 0.852 27 H 0.037 0.963 28 H 0.085 0.915 29 H 0.013 0.987 30 H 0.041 0.959 31 H 0.074 0.926 32 H 0.032 0.968 33 H -0.008 1.008 34 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.669 -17.083 5.615 18.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.215 6.215 3 C 0.147 3.853 4 C -0.211 4.211 5 C -0.055 4.055 6 C -0.138 4.138 7 C -0.033 4.033 8 N -0.253 5.253 9 C -0.111 4.111 10 C 0.070 3.930 11 C -0.542 4.542 12 H 0.082 0.918 13 C -0.146 4.146 14 N -0.539 5.539 15 Si 0.724 3.276 16 H -0.197 1.197 17 H -0.210 1.210 18 H -0.212 1.212 19 C 0.069 3.931 20 Cl 0.025 6.975 21 N -0.266 5.266 22 H 0.079 0.921 23 H 0.113 0.887 24 H 0.077 0.923 25 H 0.162 0.838 26 H 0.165 0.835 27 H 0.055 0.945 28 H 0.103 0.897 29 H 0.031 0.969 30 H 0.060 0.940 31 H 0.093 0.907 32 H 0.050 0.950 33 H 0.009 0.991 34 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -5.004 -17.124 5.505 18.671 hybrid contribution 1.096 0.847 -0.636 1.524 sum -3.908 -16.278 4.869 17.434 Atomic orbital electron populations 1.22856 0.77200 1.02764 1.02731 1.86228 1.22967 1.24213 1.88110 1.19530 0.89100 0.83746 0.92892 1.21037 0.91748 0.99538 1.08796 1.21350 1.00618 0.90188 0.93378 1.20573 0.92055 0.97745 1.03473 1.20931 0.97695 0.90102 0.94522 1.62152 1.55550 1.05153 1.02485 1.22220 0.94111 0.96565 0.98180 1.19745 0.94089 0.80900 0.98273 1.21181 1.38731 0.94421 0.99830 0.91807 1.24968 0.95404 0.97252 0.96961 1.69965 1.43109 1.07752 1.33084 0.86472 0.78034 0.79311 0.83796 1.19672 1.21042 1.21174 1.21135 0.88742 0.87303 0.95926 1.98447 1.69539 1.33719 1.95791 1.66564 1.41498 0.97891 1.20614 0.92142 0.88720 0.92260 0.83783 0.83466 0.94477 0.89705 0.96897 0.94034 0.90744 0.95037 0.99064 0.93027 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.39 10.38 101.05 1.05 1.44 16 2 O -0.31 -3.81 10.48 -18.73 -0.20 -4.01 16 3 C 0.33 4.53 7.49 -17.12 -0.13 4.40 16 4 C -0.19 -2.29 10.04 -39.28 -0.39 -2.68 16 5 C -0.03 -0.37 9.14 -39.32 -0.36 -0.73 16 6 C -0.13 -2.08 4.44 -104.43 -0.46 -2.54 16 7 C 0.10 1.67 4.44 -4.98 -0.02 1.65 16 8 N -0.53 -11.05 4.64 -245.82 -1.14 -12.19 16 9 C 0.04 0.72 9.17 60.07 0.55 1.27 16 10 C 0.19 4.93 4.72 -4.97 -0.02 4.91 16 11 C -0.50 -13.94 8.51 -34.44 -0.29 -14.24 16 12 H 0.06 1.77 7.10 -52.48 -0.37 1.40 16 13 C 0.06 1.55 5.46 -17.82 -0.10 1.46 16 14 N -0.90 -26.48 13.29 55.43 0.74 -25.74 16 15 Si 0.90 21.64 29.54 -169.99 -5.02 16.62 16 16 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 17 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 18 H -0.29 -6.82 7.11 56.52 0.40 -6.41 16 19 C 0.23 3.81 7.27 -17.46 -0.13 3.68 16 20 Cl 0.00 -0.07 27.70 -51.86 -1.44 -1.50 16 21 N -0.54 -8.41 9.19 -10.43 -0.10 -8.51 16 22 H 0.06 0.62 8.10 -51.93 -0.42 0.20 16 23 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.06 0.58 8.10 -51.93 -0.42 0.16 16 25 H 0.14 1.33 8.06 -52.48 -0.42 0.91 16 26 H 0.15 1.48 8.05 -52.49 -0.42 1.05 16 27 H 0.04 0.60 7.98 -51.93 -0.41 0.18 16 28 H 0.08 1.50 7.38 -51.93 -0.38 1.12 16 29 H 0.01 0.23 8.14 -51.93 -0.42 -0.19 16 30 H 0.04 0.70 6.66 -51.92 -0.35 0.35 16 31 H 0.07 1.54 6.86 -51.93 -0.36 1.18 16 32 H 0.03 0.85 7.93 -51.93 -0.41 0.44 16 33 H -0.01 -0.23 8.12 -51.93 -0.42 -0.65 16 34 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 306.14 15.07 4.61 4.61 Total: -1.00 -30.53 306.14 -7.22 -37.75 By element: Atomic # 1 Polarization: -1.27 SS G_CDS: -4.37 Total: -5.64 kcal Atomic # 6 Polarization: -1.07 SS G_CDS: -0.31 Total: -1.38 kcal Atomic # 7 Polarization: -45.95 SS G_CDS: -0.50 Total: -46.45 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -0.20 Total: -4.01 kcal Atomic # 14 Polarization: 21.64 SS G_CDS: -5.02 Total: 16.62 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.44 Total: -1.50 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -30.53 -7.22 -37.75 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001237794120.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.600 kcal (2) G-P(sol) polarization free energy of solvation -30.525 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.747 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds