Wall clock time and date at job start Mon Mar 30 2020 01:24:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35673 * 116.99829 * 2 1 4 4 N 1.32304 * 119.67731 * 359.97438 * 3 2 1 5 5 C 1.31960 * 121.68083 * 180.02562 * 4 3 2 6 6 C 1.38036 * 120.84508 * 359.97438 * 5 4 3 7 7 C 1.38926 * 119.27213 * 0.02562 * 6 5 4 8 8 Cl 1.73600 * 120.77351 * 179.97438 * 7 6 5 9 9 C 1.38575 * 118.45814 * 0.02562 * 7 6 5 10 10 C 1.50703 * 120.44986 * 179.72679 * 9 7 6 11 11 N 1.46900 * 109.47039 * 90.00126 * 10 9 7 12 12 C 1.46906 * 110.99928 * 293.95046 * 11 10 9 13 13 C 1.46895 * 110.99970 * 170.00141 * 11 10 9 14 14 C 1.50703 * 109.47157 * 189.99735 * 13 11 10 15 15 H 1.08003 * 119.99973 * 0.02562 * 14 13 11 16 16 C 1.37879 * 119.99978 * 179.97438 * 14 13 11 17 17 N 1.31519 * 119.99996 * 180.02562 * 16 14 13 18 18 Si 1.86805 * 120.00146 * 359.97438 * 16 14 13 19 19 H 1.48500 * 109.46742 * 90.00079 * 18 16 14 20 20 H 1.48492 * 109.47138 * 210.00411 * 18 16 14 21 21 H 1.48503 * 109.46918 * 330.00321 * 18 16 14 22 22 H 1.09006 * 109.47109 * 60.00634 * 1 2 3 23 23 H 1.09003 * 109.46717 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47379 * 300.00334 * 1 2 3 25 25 H 1.07997 * 119.57540 * 180.02562 * 5 4 3 26 26 H 1.08001 * 120.36142 * 179.97438 * 6 5 4 27 27 H 1.08997 * 109.46805 * 209.99712 * 10 9 7 28 28 H 1.08996 * 109.47235 * 329.99987 * 10 9 7 29 29 H 1.09001 * 109.46868 * 59.99991 * 12 11 10 30 30 H 1.08994 * 109.47310 * 180.02562 * 12 11 10 31 31 H 1.08999 * 109.47305 * 300.00570 * 12 11 10 32 32 H 1.08999 * 109.46955 * 309.99659 * 13 11 10 33 33 H 1.08999 * 109.47605 * 69.99392 * 13 11 10 34 34 H 0.96998 * 119.99624 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2089 0.0000 4 7 1.3181 2.3144 -0.0005 5 6 1.8757 3.5104 -0.0010 6 6 3.2489 3.6511 -0.0005 7 6 4.0481 2.5148 0.0000 8 17 5.7791 2.6464 0.0000 9 6 3.4316 1.2737 -0.0006 10 6 4.2552 0.0117 -0.0062 11 7 4.5277 -0.4014 1.3769 12 6 5.3887 0.5748 2.0580 13 6 5.1203 -1.7448 1.4180 14 6 5.1588 -2.2335 2.8431 15 1 4.7805 -1.6087 3.6387 16 6 5.6761 -3.4787 3.1312 17 7 5.7092 -3.9053 4.3748 18 14 6.3285 -4.5603 1.7550 19 1 7.7726 -4.2821 1.5491 20 1 6.1465 -5.9884 2.1192 21 1 5.5850 -4.2702 0.5026 22 1 -0.3634 0.5138 -0.8901 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 1.2496 4.3904 -0.0010 26 1 3.6969 4.6338 -0.0014 27 1 3.7067 -0.7778 -0.5198 28 1 5.1973 0.1950 -0.5229 29 1 4.8944 1.5462 2.0742 30 1 5.5750 0.2444 3.0798 31 1 6.3359 0.6581 1.5250 32 1 4.5184 -2.4260 0.8165 33 1 6.1340 -1.7073 1.0193 34 1 6.0728 -4.7815 4.5774 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001248791616.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:24:47 Heat of formation + Delta-G solvation = 8.442294 kcal Electronic energy + Delta-G solvation = -18731.590052 eV Core-core repulsion = 15691.558044 eV Total energy + Delta-G solvation = -3040.032008 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.77007 -37.99569 -36.94366 -36.40915 -32.94979 -31.97516 -31.05415 -27.97687 -27.18800 -26.83402 -24.15179 -22.97032 -21.83964 -20.12130 -18.41292 -17.35774 -16.84960 -16.04817 -15.77020 -14.92716 -14.76961 -14.43926 -14.21126 -13.94878 -13.64189 -13.44125 -12.98001 -12.33815 -12.26741 -12.10179 -11.88770 -11.49806 -11.19436 -11.18162 -11.03370 -10.67676 -10.61879 -10.23948 -9.85049 -9.73083 -9.40238 -9.23873 -8.54893 -8.45528 -7.31920 -6.01548 -3.98318 0.95703 1.09426 1.86467 3.21882 3.30813 3.38285 3.40932 3.61367 4.22085 4.45272 4.70395 4.85976 4.90431 5.07586 5.29708 5.31518 5.36986 5.39508 5.54308 5.66283 5.80794 6.00767 6.07688 6.15453 6.23477 6.34820 6.75176 6.89118 7.02738 7.26000 7.62784 7.74962 7.92183 8.06844 8.69485 9.07382 9.60172 11.11658 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.020332 B = 0.006139 C = 0.005164 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1376.830461 B = 4559.897002 C = 5420.883690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 O -0.286 6.286 3 C 0.353 3.647 4 N -0.540 5.540 5 C 0.144 3.856 6 C -0.208 4.208 7 C 0.039 3.961 8 Cl -0.041 7.041 9 C -0.126 4.126 10 C 0.096 3.904 11 N -0.520 5.520 12 C 0.034 3.966 13 C 0.163 3.837 14 C -0.506 4.506 15 H 0.081 0.919 16 C 0.068 3.932 17 N -0.901 5.901 18 Si 0.874 3.126 19 H -0.278 1.278 20 H -0.286 1.286 21 H -0.266 1.266 22 H 0.055 0.945 23 H 0.097 0.903 24 H 0.059 0.941 25 H 0.166 0.834 26 H 0.144 0.856 27 H 0.087 0.913 28 H 0.041 0.959 29 H 0.044 0.956 30 H 0.078 0.922 31 H 0.017 0.983 32 H 0.030 0.970 33 H -0.016 1.016 34 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.570 14.746 -11.746 19.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.191 6.191 3 C 0.173 3.827 4 N -0.265 5.265 5 C -0.012 4.012 6 C -0.229 4.229 7 C 0.004 3.996 8 Cl -0.012 7.012 9 C -0.130 4.130 10 C -0.033 4.033 11 N -0.243 5.243 12 C -0.114 4.114 13 C 0.037 3.963 14 C -0.544 4.544 15 H 0.099 0.901 16 C -0.133 4.133 17 N -0.541 5.541 18 Si 0.702 3.298 19 H -0.204 1.204 20 H -0.212 1.212 21 H -0.191 1.191 22 H 0.074 0.926 23 H 0.116 0.884 24 H 0.078 0.922 25 H 0.183 0.817 26 H 0.162 0.838 27 H 0.105 0.895 28 H 0.059 0.941 29 H 0.063 0.937 30 H 0.096 0.904 31 H 0.035 0.965 32 H 0.048 0.952 33 H 0.002 0.998 34 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -7.612 14.185 -11.378 19.714 hybrid contribution 1.957 -0.361 -0.985 2.220 sum -5.655 13.824 -12.363 19.389 Atomic orbital electron populations 1.22885 0.77329 1.03188 1.02052 1.86380 1.22565 1.23441 1.86744 1.19391 0.88102 0.84822 0.90412 1.67369 1.40765 0.98732 1.19594 1.22299 0.91824 0.93918 0.93115 1.21831 0.94545 0.98516 1.07993 1.20937 0.85966 0.93692 0.98996 1.98394 1.08561 1.98054 1.96214 1.19754 0.91920 0.95650 1.05692 1.20893 0.96775 0.92659 0.92928 1.62003 1.47384 1.03743 1.11199 1.22447 0.93694 0.94559 1.00703 1.20200 0.91975 0.85262 0.98831 1.21020 1.39953 1.01852 0.91557 0.90147 1.24886 0.95621 0.97538 0.95278 1.69897 1.46620 1.19658 1.17886 0.86875 0.79612 0.80152 0.83206 1.20386 1.21169 1.19101 0.92620 0.88426 0.92213 0.81733 0.83794 0.89514 0.94091 0.93723 0.90373 0.96482 0.95206 0.99790 0.92718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.49 10.38 101.05 1.05 1.54 16 2 O -0.29 -4.66 9.54 -18.72 -0.18 -4.84 16 3 C 0.35 5.65 7.46 -17.14 -0.13 5.52 16 4 N -0.54 -7.54 9.22 -13.35 -0.12 -7.66 16 5 C 0.14 1.60 11.17 -17.57 -0.20 1.40 16 6 C -0.21 -2.33 9.93 -39.40 -0.39 -2.73 16 7 C 0.04 0.55 5.28 -39.20 -0.21 0.34 16 8 Cl -0.04 -0.56 24.32 -51.86 -1.26 -1.82 16 9 C -0.13 -2.06 4.91 -104.28 -0.51 -2.57 16 10 C 0.10 1.76 4.70 -4.97 -0.02 1.74 16 11 N -0.52 -11.39 4.74 -245.83 -1.17 -12.56 16 12 C 0.03 0.70 7.83 60.07 0.47 1.17 16 13 C 0.16 4.07 3.79 -4.98 -0.02 4.05 16 14 C -0.51 -14.63 9.01 -34.44 -0.31 -14.94 16 15 H 0.08 2.54 7.37 -52.48 -0.39 2.15 16 16 C 0.07 1.99 5.47 -17.82 -0.10 1.90 16 17 N -0.90 -27.91 13.96 55.43 0.77 -27.14 16 18 Si 0.87 21.76 27.47 -169.99 -4.67 17.09 16 19 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 20 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 21 H -0.27 -6.37 6.54 56.52 0.37 -6.00 16 22 H 0.06 0.59 8.10 -51.93 -0.42 0.17 16 23 H 0.10 0.98 8.14 -51.93 -0.42 0.55 16 24 H 0.06 0.71 8.10 -51.93 -0.42 0.29 16 25 H 0.17 1.18 8.06 -52.49 -0.42 0.75 16 26 H 0.14 1.20 8.06 -52.49 -0.42 0.78 16 27 H 0.09 1.60 7.34 -51.93 -0.38 1.22 16 28 H 0.04 0.72 7.00 -51.93 -0.36 0.36 16 29 H 0.04 0.82 5.62 -51.93 -0.29 0.53 16 30 H 0.08 1.76 6.76 -51.93 -0.35 1.41 16 31 H 0.02 0.33 7.17 -51.93 -0.37 -0.05 16 32 H 0.03 0.75 6.99 -51.93 -0.36 0.39 16 33 H -0.02 -0.39 7.55 -51.93 -0.39 -0.78 16 34 H 0.26 7.62 8.31 -40.82 -0.34 7.28 16 LS Contribution 294.50 15.07 4.44 4.44 Total: -1.00 -32.33 294.50 -6.73 -39.06 By element: Atomic # 1 Polarization: 0.19 SS G_CDS: -4.18 Total: -3.99 kcal Atomic # 6 Polarization: -2.21 SS G_CDS: -0.36 Total: -2.58 kcal Atomic # 7 Polarization: -46.85 SS G_CDS: -0.52 Total: -47.36 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -0.18 Total: -4.84 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -4.67 Total: 17.09 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.26 Total: -1.82 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -32.33 -6.73 -39.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001248791616.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.502 kcal (2) G-P(sol) polarization free energy of solvation -32.331 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.729 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.060 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds