Wall clock time and date at job start Mon Mar 30 2020 01:27:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34742 * 116.99990 * 2 1 4 4 O 1.21507 * 120.00158 * 0.02562 * 3 2 1 5 5 C 1.47403 * 120.00131 * 180.02562 * 3 2 1 6 6 C 1.39961 * 120.19579 * 89.72640 * 5 3 2 7 7 F 1.35091 * 120.09995 * 359.97438 * 6 5 3 8 8 C 1.38218 * 119.79713 * 179.72216 * 6 5 3 9 9 C 1.38311 * 120.19680 * 0.53430 * 8 6 5 10 10 C 1.50697 * 119.80210 * 179.74188 * 9 8 6 11 11 C 1.52995 * 109.47183 * 270.01881 * 10 9 8 12 12 C 1.50697 * 109.47187 * 179.97438 * 11 10 9 13 13 H 1.08001 * 119.99922 * 0.02562 * 12 11 10 14 14 C 1.37881 * 120.00202 * 179.97438 * 12 11 10 15 15 N 1.31521 * 119.99590 * 0.02562 * 14 12 11 16 16 Si 1.86795 * 120.00299 * 180.02562 * 14 12 11 17 17 H 1.48497 * 109.47055 * 90.00159 * 16 14 12 18 18 H 1.48504 * 109.47281 * 210.00371 * 16 14 12 19 19 H 1.48498 * 109.46858 * 330.00030 * 16 14 12 20 20 C 1.38306 * 120.39658 * 359.75994 * 9 8 6 21 21 C 1.38214 * 120.19998 * 359.95770 * 20 9 8 22 22 F 1.35098 * 120.10482 * 180.02562 * 21 20 9 23 23 H 1.09000 * 109.47070 * 300.00014 * 1 2 3 24 24 H 1.09001 * 109.46626 * 60.00031 * 1 2 3 25 25 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 26 26 H 1.08004 * 119.89976 * 180.29329 * 8 6 5 27 27 H 1.09006 * 109.47080 * 30.01558 * 10 9 8 28 28 H 1.08998 * 109.46987 * 150.01570 * 10 9 8 29 29 H 1.09003 * 109.47433 * 300.00273 * 11 10 9 30 30 H 1.09010 * 109.47002 * 59.99783 * 11 10 9 31 31 H 0.97004 * 119.99716 * 179.97438 * 15 14 12 32 32 H 1.08005 * 119.90453 * 179.97438 * 20 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0638 1.2006 0.0000 4 8 1.4020 2.2196 0.0005 5 6 3.5358 1.2777 -0.0006 6 6 4.2386 1.3091 -1.2105 7 9 3.5699 1.2682 -2.3836 8 6 5.6185 1.3873 -1.2015 9 6 6.3054 1.4234 -0.0015 10 6 7.8103 1.5029 -0.0020 11 6 8.3956 0.0893 -0.0028 12 6 9.9005 0.1687 -0.0040 13 1 10.3904 1.1312 -0.0037 14 6 10.6519 -0.9873 -0.0043 15 7 10.0552 -2.1594 -0.0041 16 14 12.5173 -0.8889 -0.0050 17 1 13.0121 -0.8629 1.3948 18 1 13.0752 -2.0736 -0.7054 19 1 12.9473 0.3480 -0.7052 20 6 5.6194 1.3867 1.1989 21 6 4.2392 1.3144 1.2090 22 9 3.5711 1.2792 2.3826 23 1 -0.3633 0.5138 0.8900 24 1 -0.3632 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 6.1622 1.4164 -2.1342 27 1 8.1457 2.0355 -0.8920 28 1 8.1463 2.0348 0.8880 29 1 8.0602 -0.4434 0.8870 30 1 8.0594 -0.4426 -0.8930 31 1 10.5838 -2.9727 -0.0047 32 1 6.1638 1.4150 2.1312 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001250060767.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:27:26 Heat of formation + Delta-G solvation = -163.546952 kcal Electronic energy + Delta-G solvation = -19846.649667 eV Core-core repulsion = 16215.070214 eV Total energy + Delta-G solvation = -3631.579453 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.085 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -49.15491 -49.13071 -40.55336 -38.89765 -36.59775 -34.26994 -32.41493 -30.43136 -29.91278 -27.85660 -25.77175 -23.28235 -23.01940 -21.50206 -20.55605 -18.38711 -17.62789 -17.56559 -17.22340 -16.38097 -16.13691 -15.97114 -15.75479 -15.41811 -15.06897 -14.56434 -14.25397 -13.55424 -13.43244 -13.30948 -12.72164 -12.47905 -12.44381 -12.03314 -11.92665 -11.82856 -11.17870 -11.00837 -11.00412 -10.74672 -10.66006 -10.06318 -9.85245 -9.27433 -8.81594 -8.73298 -8.45470 -6.10282 -4.14475 0.70298 0.96061 1.81706 2.46771 3.26556 3.30107 3.33746 3.36449 3.61241 4.26203 4.36860 4.44591 4.70749 4.75356 4.89632 4.98047 5.18291 5.26025 5.28589 5.60540 5.60946 5.76916 5.87454 6.06017 6.06846 6.36397 6.54897 6.59532 6.81984 7.42503 7.51537 7.60200 7.86765 8.25143 8.91762 9.50694 11.00581 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.032647 B = 0.003902 C = 0.003823 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 857.448028 B = 7174.675195 C = 7321.568534 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.346 6.346 3 C 0.527 3.473 4 O -0.488 6.488 5 C -0.206 4.206 6 C 0.170 3.830 7 F -0.126 7.126 8 C -0.162 4.162 9 C 0.026 3.974 10 C -0.086 4.086 11 C 0.028 3.972 12 C -0.527 4.527 13 H 0.058 0.942 14 C 0.059 3.941 15 N -0.892 5.892 16 Si 0.894 3.106 17 H -0.280 1.280 18 H -0.286 1.286 19 H -0.273 1.273 20 C -0.162 4.162 21 C 0.170 3.830 22 F -0.126 7.126 23 H 0.065 0.935 24 H 0.065 0.935 25 H 0.105 0.895 26 H 0.154 0.846 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.022 0.978 30 H 0.022 0.978 31 H 0.262 0.738 32 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.512 5.351 0.004 15.468 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.262 6.262 3 C 0.368 3.632 4 O -0.375 6.375 5 C -0.209 4.209 6 C 0.150 3.850 7 F -0.104 7.104 8 C -0.181 4.181 9 C 0.025 3.975 10 C -0.124 4.124 11 C -0.009 4.009 12 C -0.565 4.565 13 H 0.076 0.924 14 C -0.143 4.143 15 N -0.531 5.531 16 Si 0.722 3.278 17 H -0.206 1.206 18 H -0.212 1.212 19 H -0.198 1.198 20 C -0.181 4.181 21 C 0.150 3.850 22 F -0.104 7.104 23 H 0.084 0.916 24 H 0.084 0.916 25 H 0.123 0.877 26 H 0.171 0.829 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.040 0.960 30 H 0.040 0.960 31 H 0.072 0.928 32 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -14.785 5.449 0.000 15.757 hybrid contribution 0.469 -0.132 0.011 0.487 sum -14.316 5.316 0.011 15.271 Atomic orbital electron populations 1.23357 0.75841 1.04076 1.02722 1.86695 1.23695 1.32199 1.83564 1.20703 0.88286 0.81934 0.72229 1.90861 1.66406 1.36065 1.44163 1.18771 0.90345 1.18292 0.93466 1.17163 0.89795 0.98910 0.79085 1.91538 1.80671 1.93299 1.44895 1.21133 0.90753 1.05330 1.00841 1.20333 0.98574 0.88121 0.90447 1.21070 0.85680 1.02774 1.02842 1.19132 0.95441 0.88270 0.98055 1.21177 0.91141 0.92627 1.51539 0.92365 1.25017 0.98772 0.95430 0.95055 1.69963 1.35598 0.97363 1.50139 0.86565 0.85443 0.77661 0.78177 1.20598 1.21184 1.19794 1.21129 0.90749 1.05337 1.00836 1.17164 0.89798 0.98925 0.79072 1.91540 1.80699 1.93316 1.44850 0.91635 0.91643 0.87657 0.82868 0.90826 0.90834 0.96006 0.95999 0.92812 0.82869 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.32 10.57 101.05 1.07 1.39 16 2 O -0.35 -4.83 10.58 -40.61 -0.43 -5.26 16 3 C 0.53 8.31 6.68 34.46 0.23 8.54 16 4 O -0.49 -8.43 16.90 -19.27 -0.33 -8.76 16 5 C -0.21 -3.22 5.76 -104.87 -0.60 -3.82 16 6 C 0.17 2.58 7.29 -38.94 -0.28 2.29 16 7 F -0.13 -1.89 16.83 2.25 0.04 -1.85 16 8 C -0.16 -2.38 9.65 -39.56 -0.38 -2.76 16 9 C 0.03 0.40 5.14 -104.57 -0.54 -0.14 16 10 C -0.09 -1.52 5.27 -27.89 -0.15 -1.67 16 11 C 0.03 0.65 4.95 -27.89 -0.14 0.52 16 12 C -0.53 -13.80 9.11 -34.44 -0.31 -14.12 16 13 H 0.06 1.46 7.74 -52.49 -0.41 1.06 16 14 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 15 N -0.89 -25.63 13.29 55.43 0.74 -24.90 16 16 Si 0.89 20.64 29.54 -169.99 -5.02 15.62 16 17 H -0.28 -6.40 7.11 56.52 0.40 -5.99 16 18 H -0.29 -6.60 7.11 56.52 0.40 -6.20 16 19 H -0.27 -6.16 7.11 56.52 0.40 -5.75 16 20 C -0.16 -2.38 9.65 -39.57 -0.38 -2.76 16 21 C 0.17 2.57 7.29 -38.94 -0.28 2.29 16 22 F -0.13 -1.89 16.83 2.25 0.04 -1.85 16 23 H 0.06 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.06 0.59 8.14 -51.93 -0.42 0.17 16 25 H 0.11 0.68 8.14 -51.93 -0.42 0.26 16 26 H 0.15 2.02 8.06 -52.48 -0.42 1.60 16 27 H 0.07 1.22 8.08 -51.93 -0.42 0.80 16 28 H 0.07 1.22 8.08 -51.93 -0.42 0.80 16 29 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 30 H 0.02 0.54 8.14 -51.92 -0.42 0.12 16 31 H 0.26 7.14 8.31 -40.82 -0.34 6.80 16 32 H 0.15 2.02 8.06 -52.48 -0.42 1.59 16 LS Contribution 301.14 15.07 4.54 4.54 Total: -1.00 -30.01 301.14 -5.64 -35.65 By element: Atomic # 1 Polarization: -1.12 SS G_CDS: -3.34 Total: -4.46 kcal Atomic # 6 Polarization: -6.86 SS G_CDS: -1.87 Total: -8.73 kcal Atomic # 7 Polarization: -25.63 SS G_CDS: 0.74 Total: -24.90 kcal Atomic # 8 Polarization: -13.26 SS G_CDS: -0.76 Total: -14.02 kcal Atomic # 9 Polarization: -3.77 SS G_CDS: 0.08 Total: -3.70 kcal Atomic # 14 Polarization: 20.64 SS G_CDS: -5.02 Total: 15.62 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -30.01 -5.64 -35.65 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001250060767.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.900 kcal (2) G-P(sol) polarization free energy of solvation -30.011 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.647 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.547 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds