Wall clock time and date at job start Mon Mar 30 2020 01:03:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53003 * 109.47440 * 2 1 4 4 N 1.46510 * 109.47048 * 119.99766 * 2 1 3 5 5 C 1.46499 * 119.99988 * 117.32795 * 4 2 1 6 6 C 1.50696 * 109.47312 * 91.85003 * 5 4 2 7 7 H 1.07998 * 120.00022 * 0.02562 * 6 5 4 8 8 C 1.37880 * 119.99943 * 179.97438 * 6 5 4 9 9 N 1.31517 * 119.99863 * 180.02562 * 8 6 5 10 10 Si 1.86793 * 119.99978 * 0.02562 * 8 6 5 11 11 H 1.48502 * 109.47476 * 89.99767 * 10 8 6 12 12 H 1.48506 * 109.47148 * 209.99801 * 10 8 6 13 13 H 1.48501 * 109.47312 * 329.99581 * 10 8 6 14 14 C 1.34777 * 119.99689 * 297.32573 * 4 2 1 15 15 O 1.21708 * 120.00319 * 5.93852 * 14 4 2 16 16 C 1.46553 * 119.99443 * 185.93193 * 14 4 2 17 17 C 1.37937 * 126.22630 * 187.40571 * 16 14 4 18 18 C 1.39747 * 107.11874 * 179.97438 * 17 16 14 19 19 C 1.35667 * 107.88696 * 359.97438 * 18 17 16 20 20 Cl 1.73596 * 125.57341 * 180.02562 * 19 18 17 21 21 N 1.35579 * 108.84539 * 359.76847 * 19 18 17 22 22 H 0.96995 * 125.69259 * 180.23042 * 21 19 18 23 23 H 1.08998 * 109.46927 * 297.17322 * 1 2 3 24 24 H 1.08999 * 109.46644 * 57.17891 * 1 2 3 25 25 H 1.09000 * 109.46899 * 177.17274 * 1 2 3 26 26 H 1.09005 * 109.47514 * 239.99428 * 2 1 3 27 27 H 1.08993 * 109.46992 * 184.47582 * 3 2 1 28 28 H 1.09000 * 109.46644 * 304.47144 * 3 2 1 29 29 H 1.08998 * 109.47240 * 64.47365 * 3 2 1 30 30 H 1.08997 * 109.47049 * 211.85454 * 5 4 2 31 31 H 1.09006 * 109.46902 * 331.85058 * 5 4 2 32 32 H 0.96991 * 119.99649 * 180.02562 * 9 8 6 33 33 H 1.07991 * 126.43971 * 359.96316 * 17 16 14 34 34 H 1.08001 * 126.05669 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 2.0184 -0.6906 1.1963 5 6 2.8117 -1.9150 1.0627 6 6 4.2764 -1.5628 1.0243 7 1 4.5855 -0.5303 1.0930 8 6 5.2219 -2.5589 0.9026 9 7 6.5003 -2.2516 0.8696 10 14 4.6873 -4.3448 0.7845 11 1 4.4828 -4.7072 -0.6410 12 1 5.7375 -5.2158 1.3710 13 1 3.4164 -4.5314 1.5298 14 6 1.7378 -0.1994 2.4196 15 8 0.9903 0.7540 2.5359 16 6 2.3327 -0.8136 3.6098 17 6 2.0279 -0.5130 4.9211 18 6 2.8249 -1.3308 5.7266 19 6 3.5875 -2.1022 4.9117 20 17 4.7448 -3.2860 5.4341 21 7 3.2938 -1.8012 3.6228 22 1 3.6951 -2.2108 2.8405 23 1 -0.3633 0.4693 0.9142 24 1 -0.3632 0.5570 -0.8636 25 1 -0.3633 -1.0264 -0.0507 26 1 1.8934 -0.5139 -0.8899 27 1 3.1271 1.4435 -0.0802 28 1 1.6128 1.9789 -0.8472 29 1 1.7437 1.9327 0.9273 30 1 2.6172 -2.5684 1.9131 31 1 2.5368 -2.4272 0.1406 32 1 7.1654 -2.9523 0.7836 33 1 1.3086 0.2172 5.2612 34 1 2.8319 -1.3466 6.8064 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001263723676.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:03:50 Heat of formation + Delta-G solvation = 15.830738 kcal Electronic energy + Delta-G solvation = -19414.001600 eV Core-core repulsion = 16374.289979 eV Total energy + Delta-G solvation = -3039.711621 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.088 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.98860 -38.91710 -36.27584 -35.72881 -33.62385 -32.06291 -30.41305 -28.54946 -27.75526 -26.72894 -23.35788 -22.33804 -20.88870 -19.85880 -19.31727 -17.37413 -16.96542 -15.94075 -15.41330 -14.90129 -14.34162 -13.81218 -13.71928 -13.66900 -13.23501 -12.86160 -12.75441 -12.58628 -12.29592 -12.01020 -11.82663 -11.55117 -11.28941 -11.18715 -11.05832 -10.85099 -10.81392 -10.54038 -10.40449 -9.93948 -9.17992 -9.08581 -8.57958 -8.02526 -7.60357 -6.57750 -4.65374 1.95995 2.13052 2.91844 2.99047 3.00455 3.04238 3.59969 3.91590 3.92798 4.11946 4.70700 5.11752 5.49678 5.56866 5.66358 5.69975 5.80902 5.96121 6.02576 6.15772 6.21670 6.29787 6.33678 6.37521 6.44682 6.63102 6.76989 6.99556 7.03409 7.20454 7.33721 7.84408 7.96588 8.13294 8.53607 8.76522 8.95591 10.52633 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.014604 B = 0.010234 C = 0.006764 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1916.813043 B = 2735.240980 C = 4138.515159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.150 3.850 3 C -0.167 4.167 4 N -0.588 5.588 5 C 0.190 3.810 6 C -0.566 4.566 7 H 0.090 0.910 8 C 0.082 3.918 9 N -0.862 5.862 10 Si 0.849 3.151 11 H -0.262 1.262 12 H -0.272 1.272 13 H -0.261 1.261 14 C 0.594 3.406 15 O -0.548 6.548 16 C -0.022 4.022 17 C -0.124 4.124 18 C -0.192 4.192 19 C 0.074 3.926 20 Cl -0.032 7.032 21 N -0.505 5.505 22 H 0.443 0.557 23 H 0.078 0.922 24 H 0.058 0.942 25 H 0.048 0.952 26 H 0.085 0.915 27 H 0.058 0.942 28 H 0.056 0.944 29 H 0.075 0.925 30 H 0.030 0.970 31 H 0.042 0.958 32 H 0.274 0.726 33 H 0.149 0.851 34 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.782 -1.033 3.288 7.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.227 4.227 2 C 0.047 3.953 3 C -0.225 4.225 4 N -0.318 5.318 5 C 0.067 3.933 6 C -0.604 4.604 7 H 0.108 0.892 8 C -0.126 4.126 9 N -0.496 5.496 10 Si 0.674 3.326 11 H -0.187 1.187 12 H -0.197 1.197 13 H -0.186 1.186 14 C 0.384 3.616 15 O -0.428 6.428 16 C -0.139 4.139 17 C -0.151 4.151 18 C -0.218 4.218 19 C -0.072 4.072 20 Cl -0.004 7.004 21 N -0.117 5.117 22 H 0.303 0.697 23 H 0.097 0.903 24 H 0.077 0.923 25 H 0.068 0.932 26 H 0.103 0.897 27 H 0.077 0.923 28 H 0.075 0.925 29 H 0.094 0.906 30 H 0.047 0.953 31 H 0.060 0.940 32 H 0.084 0.916 33 H 0.167 0.833 34 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -6.758 -0.828 3.094 7.479 hybrid contribution 0.549 -1.482 -0.490 1.655 sum -6.209 -2.310 2.604 7.119 Atomic orbital electron populations 1.22248 0.95631 1.01524 1.03263 1.20902 0.93540 0.93513 0.87329 1.22159 1.01541 0.95914 1.02852 1.47881 1.52059 1.26967 1.04884 1.20178 0.92113 0.83147 0.97844 1.21526 0.88090 0.97134 1.53685 0.89244 1.24985 0.94947 0.98866 0.93845 1.69852 1.00166 1.34089 1.45522 0.87236 0.79680 0.85371 0.80348 1.18664 1.19652 1.18554 1.16927 0.80297 0.82661 0.81749 1.90685 1.37669 1.28251 1.86165 1.20475 0.99357 0.98388 0.95644 1.21087 1.02287 1.01825 0.89873 1.20494 1.01368 1.00906 0.99040 1.21132 0.99748 0.99753 0.86533 1.98357 1.57819 1.55648 1.88548 1.44319 1.30124 1.29100 1.08185 0.69738 0.90267 0.92342 0.93247 0.89657 0.92251 0.92526 0.90639 0.95314 0.94046 0.91555 0.83314 0.83751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.60 9.20 37.16 0.34 -2.26 16 2 C 0.15 2.65 3.27 -67.92 -0.22 2.43 16 3 C -0.17 -2.87 9.15 37.16 0.34 -2.53 16 4 N -0.59 -11.98 2.41 -169.04 -0.41 -12.39 16 5 C 0.19 4.09 3.73 -5.20 -0.02 4.07 16 6 C -0.57 -14.02 7.91 -34.44 -0.27 -14.29 16 7 H 0.09 2.52 8.06 -52.49 -0.42 2.10 16 8 C 0.08 2.06 5.17 -17.82 -0.09 1.97 16 9 N -0.86 -23.36 13.96 55.43 0.77 -22.58 16 10 Si 0.85 18.42 27.08 -169.99 -4.60 13.82 16 11 H -0.26 -5.56 7.11 56.52 0.40 -5.15 16 12 H -0.27 -5.89 7.11 56.52 0.40 -5.49 16 13 H -0.26 -5.39 6.54 56.52 0.37 -5.02 16 14 C 0.59 12.56 7.01 -12.91 -0.09 12.47 16 15 O -0.55 -11.79 13.09 5.18 0.07 -11.72 16 16 C -0.02 -0.46 6.63 -81.93 -0.54 -1.00 16 17 C -0.12 -2.25 10.66 -39.13 -0.42 -2.67 16 18 C -0.19 -3.26 10.78 -39.94 -0.43 -3.69 16 19 C 0.07 1.41 7.74 -16.82 -0.13 1.28 16 20 Cl -0.03 -0.55 29.30 -51.86 -1.52 -2.07 16 21 N -0.50 -10.67 4.83 -6.54 -0.03 -10.71 16 22 H 0.44 9.93 2.91 -40.82 -0.12 9.81 16 23 H 0.08 1.36 6.09 -51.93 -0.32 1.05 16 24 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 25 H 0.05 0.73 8.14 -51.93 -0.42 0.30 16 26 H 0.09 1.44 7.79 -51.93 -0.40 1.04 16 27 H 0.06 1.10 8.14 -51.93 -0.42 0.68 16 28 H 0.06 0.81 8.14 -51.93 -0.42 0.38 16 29 H 0.07 1.42 6.06 -51.93 -0.31 1.10 16 30 H 0.03 0.64 4.31 -51.93 -0.22 0.41 16 31 H 0.04 0.85 7.33 -51.93 -0.38 0.47 16 32 H 0.27 6.95 8.31 -40.82 -0.34 6.61 16 33 H 0.15 2.39 8.06 -52.49 -0.42 1.97 16 34 H 0.14 1.98 8.06 -52.49 -0.42 1.56 16 LS Contribution 292.20 15.07 4.40 4.40 Total: -1.00 -26.60 292.20 -6.74 -33.33 By element: Atomic # 1 Polarization: 16.03 SS G_CDS: -3.89 Total: 12.14 kcal Atomic # 6 Polarization: -2.70 SS G_CDS: -1.54 Total: -4.23 kcal Atomic # 7 Polarization: -46.01 SS G_CDS: 0.33 Total: -45.67 kcal Atomic # 8 Polarization: -11.79 SS G_CDS: 0.07 Total: -11.72 kcal Atomic # 14 Polarization: 18.42 SS G_CDS: -4.60 Total: 13.82 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.52 Total: -2.07 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -26.60 -6.74 -33.33 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001263723676.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.166 kcal (2) G-P(sol) polarization free energy of solvation -26.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.568 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.335 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds