Wall clock time and date at job start Mon Mar 30 2020 00:48:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46500 * 109.47042 * 77.40518 * 3 2 1 5 5 C 1.36939 * 120.00066 * 278.15854 * 4 3 2 6 6 H 1.07998 * 120.00128 * 253.58416 * 5 4 3 7 7 C 1.39001 * 120.00384 * 73.58964 * 5 4 3 8 8 N 1.31393 * 120.00400 * 64.64020 * 7 5 4 9 9 Si 1.86807 * 119.99844 * 244.64671 * 7 5 4 10 10 H 1.48498 * 109.47121 * 89.99707 * 9 7 5 11 11 H 1.48495 * 109.46925 * 209.99601 * 9 7 5 12 12 H 1.48504 * 109.47084 * 329.99388 * 9 7 5 13 13 C 1.34770 * 120.00229 * 98.15570 * 4 3 2 14 14 O 1.21614 * 120.00748 * 185.88176 * 13 4 3 15 15 C 1.47514 * 119.99709 * 5.88110 * 13 4 3 16 16 C 1.38628 * 119.74799 * 329.44196 * 15 13 4 17 17 N 1.33767 * 122.04588 * 179.97438 * 16 15 13 18 18 H 0.97000 * 119.63173 * 180.02562 * 17 16 15 19 19 C 1.37225 * 120.74800 * 0.02562 * 17 16 15 20 20 N 1.32012 * 134.45932 * 180.02562 * 19 17 16 21 21 C 1.33411 * 110.93010 * 179.97438 * 20 19 17 22 22 C 1.35792 * 110.89467 * 0.26454 * 21 20 19 23 23 C 1.41393 * 106.44988 * 359.58744 * 22 21 20 24 24 C 1.38753 * 135.64677 * 180.11425 * 23 22 21 25 25 H 1.09003 * 109.46869 * 317.40730 * 3 2 1 26 26 H 1.08988 * 109.47166 * 197.40625 * 3 2 1 27 27 H 0.96996 * 120.00417 * 180.02562 * 8 7 5 28 28 H 1.07999 * 118.97849 * 0.02562 * 16 15 13 29 29 H 1.08003 * 124.55108 * 179.97438 * 21 20 19 30 30 H 1.07998 * 126.77423 * 179.72515 * 22 21 20 31 31 H 1.08000 * 120.73288 * 0.32704 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0965 -0.3003 -1.3480 5 6 3.1666 -1.5989 -1.7768 6 1 4.1255 -2.0884 -1.8623 7 6 2.0037 -2.2873 -2.1021 8 7 1.2691 -1.8930 -3.1177 9 14 1.4849 -3.7728 -1.0953 10 1 0.6151 -3.3324 0.0248 11 1 0.7366 -4.7200 -1.9601 12 1 2.6907 -4.4470 -0.5503 13 6 3.4768 0.7009 -2.1661 14 8 3.7803 0.4620 -3.3193 15 6 3.5248 2.0867 -1.6628 16 6 2.6470 2.4879 -0.6677 17 7 2.6508 3.7325 -0.1775 18 1 2.0210 3.9754 0.5192 19 6 3.5355 4.6696 -0.6489 20 7 3.7736 5.9381 -0.3718 21 6 4.7650 6.4131 -1.1278 22 6 5.2365 5.4547 -1.9663 23 6 4.4832 4.2872 -1.7039 24 6 4.4598 2.9902 -2.1961 25 1 2.9717 -0.7558 0.6955 26 1 2.9709 0.9813 0.3074 27 1 0.4574 -2.3731 -3.3446 28 1 1.9386 1.7732 -0.2755 29 1 5.1388 7.4254 -1.0825 30 1 6.0317 5.5623 -2.6891 31 1 5.1454 2.6816 -2.9714 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001626566734.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:48:34 Heat of formation + Delta-G solvation = 132.928211 kcal Electronic energy + Delta-G solvation = -19800.804359 eV Core-core repulsion = 16665.062971 eV Total energy + Delta-G solvation = -3135.741388 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.086 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.41676 -39.30990 -37.56115 -36.46878 -34.61057 -33.56956 -32.61094 -29.68915 -28.75484 -27.66827 -25.31064 -23.97286 -22.76246 -21.23284 -19.45216 -18.03952 -17.73747 -17.37165 -16.96564 -16.41659 -15.68903 -15.14262 -14.89380 -14.66655 -14.15379 -13.85575 -13.68707 -13.06158 -12.54373 -12.51391 -12.36644 -12.32412 -12.18352 -11.77186 -11.66344 -11.54663 -11.07331 -10.80314 -10.46282 -10.40465 -9.34191 -9.01357 -8.53860 -7.96457 -7.75188 -7.60667 -6.81284 -4.29497 0.31744 1.30777 2.38768 2.86548 2.98420 3.06564 3.21497 3.22758 3.39190 3.59056 3.93954 3.99513 4.25181 4.25891 4.43863 4.51432 4.64028 4.84794 5.16699 5.25940 5.32062 5.45846 5.80903 5.84233 6.00026 6.08814 6.22010 6.47226 6.67117 6.98333 7.19239 7.26600 7.82666 8.20385 8.22769 8.41748 8.92587 8.98104 9.78083 10.04293 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.033850 B = 0.005629 C = 0.005085 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 826.987121 B = 4972.975731 C = 5504.812250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.429 5.429 2 C 0.187 3.813 3 C 0.158 3.842 4 N -0.435 5.435 5 C -0.443 4.443 6 H 0.093 0.907 7 C 0.134 3.866 8 N -0.725 5.725 9 Si 0.825 3.175 10 H -0.271 1.271 11 H -0.284 1.284 12 H -0.255 1.255 13 C 0.537 3.463 14 O -0.516 6.516 15 C -0.211 4.211 16 C 0.141 3.859 17 N -0.492 5.492 18 H 0.423 0.577 19 C 0.242 3.758 20 N -0.540 5.540 21 C 0.047 3.953 22 C -0.228 4.228 23 C -0.171 4.171 24 C 0.080 3.920 25 H 0.122 0.878 26 H 0.109 0.891 27 H 0.272 0.728 28 H 0.191 0.809 29 H 0.155 0.845 30 H 0.136 0.864 31 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.633 7.376 7.125 10.880 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.108 5.108 2 C -0.132 4.132 3 C 0.031 3.969 4 N -0.158 5.158 5 C -0.563 4.563 6 H 0.110 0.890 7 C -0.093 4.093 8 N -0.346 5.346 9 Si 0.647 3.353 10 H -0.196 1.196 11 H -0.210 1.210 12 H -0.179 1.179 13 C 0.325 3.675 14 O -0.392 6.392 15 C -0.221 4.221 16 C -0.001 4.001 17 N -0.085 5.085 18 H 0.261 0.739 19 C -0.006 4.006 20 N -0.260 5.260 21 C -0.096 4.096 22 C -0.251 4.251 23 C -0.179 4.179 24 C 0.056 3.944 25 H 0.139 0.861 26 H 0.126 0.874 27 H 0.083 0.917 28 H 0.207 0.793 29 H 0.173 0.827 30 H 0.154 0.846 31 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.520 7.975 6.999 10.719 hybrid contribution -0.058 -1.191 0.155 1.202 sum 1.462 6.784 7.154 9.967 Atomic orbital electron populations 1.81105 1.13325 1.08148 1.08254 1.30299 0.96375 0.93404 0.93118 1.20201 0.80250 1.03917 0.92511 1.42818 1.59080 1.05773 1.08119 1.18210 0.93584 0.85610 1.58886 0.89007 1.25518 0.95976 0.96733 0.91023 1.70862 1.11422 1.37647 1.14699 0.87617 0.79815 0.84515 0.83401 1.19587 1.21008 1.17893 1.18454 0.80783 0.82184 0.86114 1.90711 1.49393 1.82735 1.16324 1.20220 1.01661 0.98834 1.01342 1.23430 0.98763 0.84241 0.93682 1.40354 1.28555 1.07585 1.32019 0.73947 1.20478 0.93014 0.90742 0.96331 1.69494 1.20516 1.06093 1.29938 1.22237 0.94032 0.99025 0.94331 1.21338 1.05003 0.92684 1.06051 1.20143 1.01343 0.95104 1.01338 1.21492 0.91520 0.89573 0.91831 0.86068 0.87419 0.91714 0.79320 0.82719 0.84611 0.83456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -8.26 18.54 42.15 0.78 -7.48 16 2 C 0.19 3.22 13.00 -20.76 -0.27 2.95 16 3 C 0.16 2.38 5.39 -6.83 -0.04 2.34 16 4 N -0.43 -8.96 2.52 -119.13 -0.30 -9.26 16 5 C -0.44 -10.59 8.18 -14.99 -0.12 -10.72 16 6 H 0.09 2.31 8.06 -52.49 -0.42 1.88 16 7 C 0.13 3.24 4.70 -17.46 -0.08 3.16 16 8 N -0.72 -18.81 13.96 55.50 0.77 -18.04 16 9 Si 0.83 17.63 29.69 -169.99 -5.05 12.58 16 10 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 11 H -0.28 -6.20 7.11 56.52 0.40 -5.80 16 12 H -0.26 -5.29 7.11 56.52 0.40 -4.88 16 13 C 0.54 11.40 7.38 -12.48 -0.09 11.31 16 14 O -0.52 -13.29 16.70 5.26 0.09 -13.20 16 15 C -0.21 -3.51 5.55 -105.11 -0.58 -4.09 16 16 C 0.14 1.88 8.55 -16.56 -0.14 1.74 16 17 N -0.49 -6.02 5.27 -10.36 -0.05 -6.08 16 18 H 0.42 3.72 8.91 -40.82 -0.36 3.36 16 19 C 0.24 3.77 8.64 -153.89 -1.33 2.44 16 20 N -0.54 -8.88 11.17 -11.08 -0.12 -9.00 16 21 C 0.05 0.71 11.69 -17.74 -0.21 0.50 16 22 C -0.23 -3.39 10.99 -39.26 -0.43 -3.82 16 23 C -0.17 -2.75 6.41 -105.01 -0.67 -3.42 16 24 C 0.08 1.29 9.72 -38.53 -0.37 0.92 16 25 H 0.12 1.55 8.10 -51.93 -0.42 1.13 16 26 H 0.11 1.22 4.16 -51.94 -0.22 1.00 16 27 H 0.27 6.59 8.31 -40.82 -0.34 6.25 16 28 H 0.19 2.38 3.00 -52.49 -0.16 2.22 16 29 H 0.16 1.82 8.06 -52.48 -0.42 1.40 16 30 H 0.14 1.70 8.06 -52.49 -0.42 1.27 16 31 H 0.15 2.27 7.95 -52.49 -0.42 1.85 16 LS Contribution 283.96 15.07 4.28 4.28 Total: -1.00 -32.70 283.96 -5.93 -38.63 By element: Atomic # 1 Polarization: 6.23 SS G_CDS: -1.98 Total: 4.25 kcal Atomic # 6 Polarization: 7.66 SS G_CDS: -4.34 Total: 3.31 kcal Atomic # 7 Polarization: -50.93 SS G_CDS: 1.08 Total: -49.86 kcal Atomic # 8 Polarization: -13.29 SS G_CDS: 0.09 Total: -13.20 kcal Atomic # 14 Polarization: 17.63 SS G_CDS: -5.05 Total: 12.58 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -32.70 -5.93 -38.63 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001626566734.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 171.556 kcal (2) G-P(sol) polarization free energy of solvation -32.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.853 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.628 kcal (6) G-S(sol) free energy of system = (1) + (5) 132.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds