Wall clock time and date at job start Mon Mar 30 2020 01:04:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46499 * 120.00048 * 2 1 4 4 C 1.50694 * 109.47297 * 270.00425 * 3 2 1 5 5 H 1.08005 * 119.99947 * 359.97438 * 4 3 2 6 6 C 1.37872 * 120.00038 * 180.02562 * 4 3 2 7 7 N 1.31516 * 120.00023 * 359.97438 * 6 4 3 8 8 Si 1.86806 * 120.00237 * 179.97438 * 6 4 3 9 9 H 1.48506 * 109.47018 * 89.99869 * 8 6 4 10 10 H 1.48501 * 109.47441 * 209.99737 * 8 6 4 11 11 H 1.48505 * 109.47133 * 329.99997 * 8 6 4 12 12 C 1.34780 * 119.99703 * 180.02562 * 2 1 3 13 13 O 1.21592 * 119.99374 * 179.97438 * 12 2 1 14 14 N 1.34770 * 120.00021 * 0.27285 * 12 2 1 15 15 C 1.40192 * 119.99637 * 174.05378 * 14 12 2 16 16 C 1.38773 * 120.05451 * 335.21866 * 15 14 12 17 17 C 1.38155 * 119.98410 * 179.67946 * 16 15 14 18 18 C 1.38483 * 120.07718 * 0.61609 * 17 16 15 19 19 F 1.35103 * 119.94298 * 179.70334 * 18 17 16 20 20 C 1.38445 * 120.10562 * 359.68370 * 18 17 16 21 21 C 1.38314 * 120.02121 * 359.97438 * 20 18 17 22 22 F 1.35096 * 120.03982 * 180.02562 * 21 20 18 23 23 H 1.08997 * 109.46914 * 269.99671 * 1 2 3 24 24 H 1.08994 * 109.46992 * 30.00071 * 1 2 3 25 25 H 1.09007 * 109.46983 * 149.99503 * 1 2 3 26 26 H 1.09007 * 109.46608 * 30.00088 * 3 2 1 27 27 H 1.08999 * 109.47069 * 150.00020 * 3 2 1 28 28 H 0.97001 * 120.00061 * 180.02562 * 7 6 4 29 29 H 0.96996 * 120.00333 * 354.05636 * 14 12 2 30 30 H 1.08000 * 120.01055 * 359.97438 * 16 15 14 31 31 H 1.07995 * 119.96572 * 180.29590 * 17 16 15 32 32 H 1.08003 * 119.98978 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4486 1.7038 -1.4207 5 1 2.0980 1.0958 -2.2417 6 6 3.1269 2.8775 -1.6726 7 7 3.5542 3.6175 -0.6730 8 14 3.4388 3.4165 -3.4338 9 1 2.3091 4.2598 -3.9008 10 1 4.6993 4.1990 -3.4962 11 1 3.5557 2.2193 -4.3046 12 6 2.1389 -1.1673 -0.0005 13 8 3.3548 -1.1672 -0.0010 14 7 1.4650 -2.3344 -0.0066 15 6 2.1608 -3.5448 -0.1329 16 6 3.4048 -3.5705 -0.7475 17 6 4.0922 -4.7631 -0.8653 18 6 3.5357 -5.9356 -0.3821 19 9 4.2077 -7.1013 -0.5042 20 6 2.2922 -5.9150 0.2260 21 6 1.6034 -4.7223 0.3525 22 9 0.3901 -4.7016 0.9464 23 1 -0.3633 -0.0001 1.0276 24 1 -0.3633 0.8899 -0.5138 25 1 -0.3633 -0.8900 -0.5139 26 1 1.6084 2.0283 0.5139 27 1 3.1500 1.1384 0.5138 28 1 4.0311 4.4435 -0.8502 29 1 0.4986 -2.3369 0.0764 30 1 3.8376 -2.6577 -1.1293 31 1 5.0624 -4.7820 -1.3393 32 1 1.8601 -6.8304 0.6025 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000034673802.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:04:09 Heat of formation + Delta-G solvation = -79.624719 kcal Electronic energy + Delta-G solvation = -20158.879512 eV Core-core repulsion = 16563.231951 eV Total energy + Delta-G solvation = -3595.647561 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.092 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -49.04881 -48.95211 -40.32257 -38.30138 -35.13971 -34.47933 -32.60915 -30.83248 -29.22563 -27.67573 -25.88457 -23.74792 -23.13554 -22.08533 -19.70378 -18.53079 -17.92407 -17.11885 -16.75946 -16.54113 -16.02815 -15.67915 -15.33941 -15.07188 -14.90097 -14.54461 -14.20970 -13.93747 -13.24250 -13.14849 -12.86336 -12.42462 -12.25157 -12.15405 -11.93048 -11.57116 -11.26446 -10.96982 -10.64239 -10.32040 -10.19160 -9.73702 -9.43070 -9.00879 -8.49255 -8.06865 -7.69059 -6.10114 -4.15431 0.92963 1.03043 2.90406 3.26642 3.27653 3.33961 3.38125 3.79005 3.84751 4.26444 4.32568 4.42938 4.59360 4.82917 5.14267 5.24159 5.35906 5.46598 5.71129 5.76751 5.84309 6.03656 6.11304 6.26963 6.42881 6.62560 6.92781 7.23516 7.37113 7.51707 7.86380 8.15027 8.38775 8.83714 9.03853 9.50059 10.97831 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.025853 B = 0.004647 C = 0.004151 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1082.773475 B = 6023.697241 C = 6743.439502 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.607 5.607 3 C 0.258 3.742 4 C -0.529 4.529 5 H 0.058 0.942 6 C 0.062 3.938 7 N -0.894 5.894 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.274 1.274 12 C 0.698 3.302 13 O -0.565 6.565 14 N -0.689 5.689 15 C 0.151 3.849 16 C -0.080 4.080 17 C -0.134 4.134 18 C 0.092 3.908 19 F -0.138 7.138 20 C -0.168 4.168 21 C 0.079 3.921 22 F -0.134 7.134 23 H 0.048 0.952 24 H 0.082 0.918 25 H 0.051 0.949 26 H 0.036 0.964 27 H 0.047 0.953 28 H 0.264 0.736 29 H 0.407 0.593 30 H 0.173 0.827 31 H 0.144 0.856 32 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.812 -15.687 1.274 16.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.342 5.342 3 C 0.139 3.861 4 C -0.568 4.568 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.533 5.533 8 Si 0.727 3.273 9 H -0.206 1.206 10 H -0.210 1.210 11 H -0.199 1.199 12 C 0.400 3.600 13 O -0.441 6.441 14 N -0.337 5.337 15 C 0.052 3.948 16 C -0.101 4.101 17 C -0.154 4.154 18 C 0.071 3.929 19 F -0.117 7.117 20 C -0.188 4.188 21 C 0.056 3.944 22 F -0.113 7.113 23 H 0.066 0.934 24 H 0.100 0.900 25 H 0.070 0.930 26 H 0.054 0.946 27 H 0.065 0.935 28 H 0.074 0.926 29 H 0.244 0.756 30 H 0.190 0.810 31 H 0.162 0.838 32 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.888 -15.357 1.338 16.171 hybrid contribution -0.564 0.157 -0.774 0.971 sum -5.452 -15.200 0.564 16.158 Atomic orbital electron populations 1.21653 0.81388 1.02697 1.00678 1.47546 1.05944 1.06220 1.74453 1.19315 0.92440 0.76620 0.97692 1.21423 1.36775 1.06409 0.92220 0.92410 1.24923 0.95246 0.96329 0.97488 1.69927 1.38226 1.14324 1.30775 0.86485 0.77720 0.78605 0.84521 1.20635 1.21042 1.19896 1.15889 0.85523 0.79925 0.78653 1.90853 1.11215 1.85334 1.56705 1.42943 1.10478 1.03513 1.76770 1.17661 0.94517 0.84215 0.98430 1.21469 0.92822 0.99623 0.96142 1.21182 1.01691 0.90597 1.01938 1.17236 0.91270 0.81851 1.02515 1.91497 1.79625 1.46283 1.94258 1.20711 0.95252 0.98060 1.04758 1.16913 0.83480 0.93087 1.00888 1.91479 1.41038 1.97164 1.81588 0.93385 0.89954 0.93011 0.94588 0.93497 0.92617 0.75605 0.80966 0.83810 0.83498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.19 10.16 59.85 0.61 1.80 16 2 N -0.61 -12.37 2.86 -188.74 -0.54 -12.91 16 3 C 0.26 6.50 5.16 -5.20 -0.03 6.48 16 4 C -0.53 -14.49 9.39 -34.44 -0.32 -14.81 16 5 H 0.06 1.58 7.81 -52.48 -0.41 1.17 16 6 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 7 N -0.89 -25.88 13.29 55.43 0.74 -25.15 16 8 Si 0.90 21.30 29.54 -169.99 -5.02 16.28 16 9 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 10 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 11 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 12 C 0.70 14.16 8.08 -86.92 -0.70 13.46 16 13 O -0.56 -13.43 13.09 5.28 0.07 -13.36 16 14 N -0.69 -10.90 5.15 -14.15 -0.07 -10.98 16 15 C 0.15 2.27 6.44 -83.54 -0.54 1.73 16 16 C -0.08 -1.22 8.72 -39.41 -0.34 -1.57 16 17 C -0.13 -1.71 10.02 -39.52 -0.40 -2.11 16 18 C 0.09 1.12 7.30 -39.41 -0.29 0.83 16 19 F -0.14 -1.67 17.26 2.25 0.04 -1.63 16 20 C -0.17 -1.94 10.00 -39.48 -0.39 -2.34 16 21 C 0.08 1.03 7.31 -39.26 -0.29 0.74 16 22 F -0.13 -1.68 16.81 2.25 0.04 -1.64 16 23 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.08 1.25 8.07 -51.93 -0.42 0.83 16 25 H 0.05 0.62 6.45 -51.93 -0.33 0.29 16 26 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 27 H 0.05 1.33 7.42 -51.93 -0.39 0.95 16 28 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 29 H 0.41 5.29 6.26 -40.82 -0.26 5.04 16 30 H 0.17 3.08 5.79 -52.49 -0.30 2.78 16 31 H 0.14 1.54 8.06 -52.49 -0.42 1.12 16 32 H 0.15 1.36 8.06 -52.48 -0.42 0.93 16 LS Contribution 289.78 15.07 4.37 4.37 Total: -1.00 -30.83 289.78 -6.10 -36.93 By element: Atomic # 1 Polarization: 5.16 SS G_CDS: -2.93 Total: 2.23 kcal Atomic # 6 Polarization: 8.64 SS G_CDS: -2.79 Total: 5.85 kcal Atomic # 7 Polarization: -49.15 SS G_CDS: 0.12 Total: -49.03 kcal Atomic # 8 Polarization: -13.43 SS G_CDS: 0.07 Total: -13.36 kcal Atomic # 9 Polarization: -3.35 SS G_CDS: 0.08 Total: -3.27 kcal Atomic # 14 Polarization: 21.30 SS G_CDS: -5.02 Total: 16.28 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -30.83 -6.10 -36.93 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000034673802.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.695 kcal (2) G-P(sol) polarization free energy of solvation -30.826 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.521 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.929 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.625 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds