Wall clock time and date at job start Mon Mar 30 2020 01:04:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.36932 * 120.00134 * 2 1 4 4 H 1.08002 * 120.00137 * 213.41730 * 3 2 1 5 5 C 1.38814 * 120.00008 * 33.41180 * 3 2 1 6 6 N 1.31618 * 119.99841 * 355.48628 * 5 3 2 7 7 Si 1.86805 * 120.00120 * 175.48454 * 5 3 2 8 8 H 1.48499 * 109.46771 * 0.02562 * 7 5 3 9 9 H 1.48497 * 109.46847 * 120.00137 * 7 5 3 10 10 H 1.48496 * 109.46980 * 240.00392 * 7 5 3 11 11 C 1.46502 * 119.99934 * 179.97438 * 2 1 3 12 12 C 1.50703 * 109.47040 * 90.00219 * 11 2 1 13 13 O 1.21300 * 119.99767 * 0.02562 * 12 11 2 14 14 N 1.34769 * 120.00077 * 180.27184 * 12 11 2 15 15 C 1.40152 * 119.99986 * 175.90552 * 14 12 11 16 16 C 1.38788 * 120.05395 * 34.21723 * 15 14 12 17 17 C 1.38144 * 119.97782 * 179.72625 * 16 15 14 18 18 C 1.38480 * 120.08584 * 0.57054 * 17 16 15 19 19 F 1.35104 * 119.94266 * 179.72804 * 18 17 16 20 20 C 1.38444 * 120.10573 * 359.70227 * 18 17 16 21 21 C 1.38301 * 120.02406 * 359.97438 * 20 18 17 22 22 F 1.35098 * 120.04555 * 179.97438 * 21 20 18 23 23 H 1.08996 * 109.47524 * 274.84049 * 1 2 3 24 24 H 1.09001 * 109.47500 * 34.84574 * 1 2 3 25 25 H 1.09007 * 109.47139 * 154.84088 * 1 2 3 26 26 H 0.97000 * 119.99652 * 180.02562 * 6 5 3 27 27 H 1.08999 * 109.47510 * 330.00226 * 11 2 1 28 28 H 1.08998 * 109.47044 * 210.00095 * 11 2 1 29 29 H 0.96999 * 120.00445 * 355.91325 * 14 12 11 30 30 H 1.08007 * 120.00561 * 359.97438 * 16 15 14 31 31 H 1.08008 * 119.95650 * 180.27131 * 17 16 15 32 32 H 1.08007 * 119.98814 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 3.0958 1.2632 -0.5151 5 6 1.6277 2.2887 0.6620 6 7 0.4347 2.2211 1.2138 7 14 2.6185 3.8687 0.7697 8 1 3.9174 3.6868 0.0733 9 1 1.8620 4.9721 0.1252 10 1 2.8633 4.2031 2.1956 11 6 2.1975 -1.2688 0.0006 12 6 2.4487 -1.7044 -1.4201 13 8 2.0550 -1.0219 -2.3423 14 7 3.1064 -2.8547 -1.6659 15 6 3.2650 -3.3033 -2.9841 16 6 3.4295 -2.3884 -4.0147 17 6 3.5914 -2.8325 -5.3127 18 6 3.5780 -4.1894 -5.5890 19 9 3.7311 -4.6203 -6.8603 20 6 3.4084 -5.1050 -4.5645 21 6 3.2526 -4.6656 -3.2624 22 9 3.0866 -5.5586 -2.2624 23 1 -0.3634 0.0867 1.0239 24 1 -0.3634 0.8434 -0.5872 25 1 -0.3634 -0.9302 -0.4369 26 1 0.0698 2.9919 1.6760 27 1 1.6084 -2.0282 0.5147 28 1 3.1499 -1.1382 0.5143 29 1 3.4699 -3.3723 -0.9304 30 1 3.4350 -1.3296 -3.8012 31 1 3.7239 -2.1203 -6.1138 32 1 3.3986 -6.1629 -4.7820 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068972874.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:04:20 Heat of formation + Delta-G solvation = -67.189596 kcal Electronic energy + Delta-G solvation = -20058.143434 eV Core-core repulsion = 16463.035101 eV Total energy + Delta-G solvation = -3595.108333 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.092 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -49.08693 -49.03563 -40.09937 -38.09550 -35.26899 -34.32175 -31.44623 -30.91702 -29.46260 -26.98634 -25.82453 -23.62024 -22.85449 -21.52965 -20.02399 -18.43430 -17.81316 -17.11959 -16.76664 -16.36896 -16.00101 -15.69979 -15.37765 -14.89038 -14.71747 -14.57843 -14.08153 -13.72034 -13.42043 -13.14096 -12.83693 -12.51124 -12.17300 -11.83274 -11.64525 -11.34834 -10.92939 -10.73965 -10.44185 -10.19966 -10.07680 -9.99750 -9.42991 -9.08184 -8.54440 -8.05729 -6.75403 -5.82720 -3.37530 0.83782 0.94006 3.00320 3.15878 3.34756 3.41765 3.44068 3.46061 3.78319 4.26433 4.43643 4.51644 4.74793 5.05641 5.20264 5.35072 5.50271 5.63260 5.66654 5.79928 6.01511 6.07551 6.11015 6.20144 6.39645 6.75306 6.86290 7.38152 7.59159 7.72076 7.78811 8.34536 8.62042 9.15695 9.72305 10.25005 11.22368 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.031137 B = 0.004241 C = 0.003953 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 899.043722 B = 6599.922204 C = 7081.466543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.162 3.838 2 N -0.573 5.573 3 C -0.262 4.262 4 H 0.065 0.935 5 C 0.016 3.984 6 N -0.901 5.901 7 Si 0.907 3.093 8 H -0.277 1.277 9 H -0.289 1.289 10 H -0.287 1.287 11 C 0.138 3.862 12 C 0.476 3.524 13 O -0.502 6.502 14 N -0.684 5.684 15 C 0.124 3.876 16 C -0.072 4.072 17 C -0.140 4.140 18 C 0.098 3.902 19 F -0.137 7.137 20 C -0.173 4.173 21 C 0.089 3.911 22 F -0.131 7.131 23 H 0.036 0.964 24 H 0.044 0.956 25 H -0.006 1.006 26 H 0.254 0.746 27 H 0.074 0.926 28 H 0.086 0.914 29 H 0.410 0.590 30 H 0.162 0.838 31 H 0.143 0.857 32 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.689 -14.058 -7.784 17.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 N -0.292 5.292 3 C -0.392 4.392 4 H 0.083 0.917 5 C -0.184 4.184 6 N -0.545 5.545 7 Si 0.736 3.264 8 H -0.202 1.202 9 H -0.215 1.215 10 H -0.214 1.214 11 C 0.004 3.996 12 C 0.262 3.738 13 O -0.373 6.373 14 N -0.332 5.332 15 C 0.027 3.973 16 C -0.092 4.092 17 C -0.160 4.160 18 C 0.078 3.922 19 F -0.116 7.116 20 C -0.193 4.193 21 C 0.067 3.933 22 F -0.110 7.110 23 H 0.055 0.945 24 H 0.063 0.937 25 H 0.013 0.987 26 H 0.065 0.935 27 H 0.092 0.908 28 H 0.104 0.896 29 H 0.246 0.754 30 H 0.180 0.820 31 H 0.161 0.839 32 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 6.186 -13.335 -8.244 16.854 hybrid contribution 0.590 0.253 0.192 0.670 sum 6.776 -13.081 -8.053 16.789 Atomic orbital electron populations 1.20928 0.82126 0.95780 0.99340 1.43569 1.01950 0.99666 1.84008 1.19123 1.04476 0.88277 1.27303 0.91716 1.25299 0.96781 0.99154 0.97124 1.70045 1.15695 1.29949 1.38762 0.86158 0.79767 0.83043 0.77440 1.20151 1.21528 1.21351 1.20715 0.99004 0.90956 0.88918 1.24208 0.75129 0.78263 0.96236 1.90625 1.48338 1.51966 1.46357 1.44241 1.57436 1.26449 1.05062 1.18010 1.01212 0.90414 0.87691 1.21234 0.96193 1.01585 0.90219 1.21168 1.02878 0.93761 0.98148 1.17234 1.03929 0.92238 0.78792 1.91504 1.93229 1.90487 1.36331 1.20775 1.06842 1.01150 0.90523 1.17088 1.06136 0.85261 0.84840 1.91496 1.93141 1.67032 1.59318 0.94527 0.93709 0.98723 0.93528 0.90828 0.89644 0.75390 0.82035 0.83868 0.83476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 4.06 8.97 59.85 0.54 4.60 16 2 N -0.57 -14.28 2.40 -182.50 -0.44 -14.71 16 3 C -0.26 -7.17 9.57 -15.06 -0.14 -7.31 16 4 H 0.07 1.77 7.83 -52.49 -0.41 1.36 16 5 C 0.02 0.44 5.38 -17.43 -0.09 0.34 16 6 N -0.90 -25.84 10.60 55.49 0.59 -25.25 16 7 Si 0.91 21.54 29.56 -169.99 -5.02 16.52 16 8 H -0.28 -6.43 7.11 56.52 0.40 -6.02 16 9 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 10 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 11 C 0.14 2.61 6.13 -5.19 -0.03 2.58 16 12 C 0.48 8.71 7.74 -10.99 -0.09 8.63 16 13 O -0.50 -11.16 13.84 5.54 0.08 -11.08 16 14 N -0.68 -9.68 5.23 -9.79 -0.05 -9.73 16 15 C 0.12 1.75 6.32 -83.55 -0.53 1.22 16 16 C -0.07 -1.02 8.70 -39.41 -0.34 -1.37 16 17 C -0.14 -1.69 10.02 -39.53 -0.40 -2.09 16 18 C 0.10 1.16 7.30 -39.42 -0.29 0.87 16 19 F -0.14 -1.60 17.26 2.25 0.04 -1.57 16 20 C -0.17 -1.94 10.00 -39.48 -0.39 -2.33 16 21 C 0.09 1.11 7.31 -39.26 -0.29 0.83 16 22 F -0.13 -1.60 16.95 2.25 0.04 -1.56 16 23 H 0.04 0.95 7.27 -51.93 -0.38 0.58 16 24 H 0.04 1.23 7.56 -51.93 -0.39 0.83 16 25 H -0.01 -0.13 8.04 -51.93 -0.42 -0.55 16 26 H 0.25 7.03 8.31 -40.82 -0.34 6.69 16 27 H 0.07 1.21 8.07 -51.93 -0.42 0.79 16 28 H 0.09 1.48 8.04 -51.93 -0.42 1.06 16 29 H 0.41 4.50 8.66 -40.82 -0.35 4.15 16 30 H 0.16 2.62 6.18 -52.48 -0.32 2.30 16 31 H 0.14 1.45 8.06 -52.48 -0.42 1.02 16 32 H 0.15 1.32 8.06 -52.48 -0.42 0.90 16 LS Contribution 290.67 15.07 4.38 4.38 Total: -1.00 -31.30 290.67 -5.54 -36.84 By element: Atomic # 1 Polarization: 3.30 SS G_CDS: -3.09 Total: 0.21 kcal Atomic # 6 Polarization: 8.01 SS G_CDS: -2.05 Total: 5.96 kcal Atomic # 7 Polarization: -49.79 SS G_CDS: 0.10 Total: -49.69 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: 0.08 Total: -11.08 kcal Atomic # 9 Polarization: -3.20 SS G_CDS: 0.08 Total: -3.13 kcal Atomic # 14 Polarization: 21.54 SS G_CDS: -5.02 Total: 16.52 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -31.30 -5.54 -36.84 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068972874.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.347 kcal (2) G-P(sol) polarization free energy of solvation -31.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds