Wall clock time and date at job start Mon Mar 30 2020 01:35:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39632 * 120.14745 * 141.85068 * 3 2 1 5 5 C 1.37948 * 119.84486 * 179.75684 * 4 3 2 6 6 C 1.38365 * 120.14846 * 0.49722 * 5 4 3 7 7 C 1.50705 * 119.84595 * 179.73823 * 6 5 4 8 8 C 1.50702 * 109.46990 * 270.01987 * 7 6 5 9 9 O 1.21291 * 119.99807 * 359.97438 * 8 7 6 10 10 N 1.34775 * 119.99913 * 179.97438 * 8 7 6 11 11 C 1.37101 * 120.00027 * 180.02562 * 10 8 7 12 12 H 1.07996 * 119.99952 * 224.47434 * 11 10 8 13 13 C 1.38948 * 119.99969 * 44.47704 * 11 10 8 14 14 N 1.31420 * 120.00142 * 18.00085 * 13 11 10 15 15 Si 1.86803 * 120.00218 * 198.00063 * 13 11 10 16 16 H 1.48497 * 109.46904 * 59.99989 * 15 13 11 17 17 H 1.48496 * 109.47215 * 179.97438 * 15 13 11 18 18 H 1.48497 * 109.46995 * 300.00129 * 15 13 11 19 19 C 1.46496 * 119.99970 * 359.97438 * 10 8 7 20 20 C 1.53002 * 117.49789 * 183.20416 * 19 10 8 21 21 C 1.53001 * 117.49760 * 114.54892 * 19 10 8 22 22 C 1.38359 * 120.30567 * 359.75993 * 6 5 4 23 23 C 1.37947 * 120.15523 * 359.97438 * 22 6 5 24 24 H 1.08003 * 120.07709 * 359.97438 * 4 3 2 25 25 H 1.07994 * 119.92747 * 180.23090 * 5 4 3 26 26 H 1.09000 * 109.47326 * 30.02021 * 7 6 5 27 27 H 1.08995 * 109.46962 * 150.02043 * 7 6 5 28 28 H 0.96996 * 120.00153 * 174.95714 * 14 13 11 29 29 H 1.09001 * 115.55456 * 328.87365 * 19 10 8 30 30 H 1.08997 * 117.49727 * 0.02562 * 20 19 10 31 31 H 1.09000 * 117.49660 * 145.02261 * 20 19 10 32 32 H 1.09008 * 117.49497 * 214.97950 * 21 19 10 33 33 H 1.09003 * 117.49903 * 359.97107 * 21 19 10 34 34 H 1.08005 * 119.92083 * 179.97438 * 22 6 5 35 35 H 1.07999 * 120.07757 * 179.97438 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2689 0.9505 -0.7459 5 6 4.6483 0.9485 -0.7374 6 6 5.3374 0.0018 -0.0002 7 6 6.8444 0.0023 -0.0005 8 6 7.3468 -0.8701 -1.1220 9 8 6.5586 -1.4368 -1.8492 10 7 8.6718 -1.0205 -1.3170 11 6 9.1289 -1.8137 -2.3376 12 1 9.9386 -2.5064 -2.1620 13 6 8.5504 -1.7262 -3.5979 14 7 7.8321 -0.6738 -3.9196 15 14 8.7935 -3.1046 -4.8350 16 1 8.2517 -4.3703 -4.2786 17 1 8.0791 -2.7719 -6.0936 18 1 10.2426 -3.2676 -5.1159 19 6 9.6238 -0.3355 -0.4391 20 6 11.1127 -0.4858 -0.7575 21 6 10.5125 -1.2040 0.4536 22 6 4.6492 -0.9456 0.7368 23 6 3.2698 -0.9518 0.7417 24 1 2.7322 1.6872 -1.3253 25 1 5.1917 1.6849 -1.3108 26 1 7.2075 1.0203 -0.1416 27 1 7.2080 -0.3845 0.9514 28 1 7.4894 -0.5779 -4.8220 29 1 9.2890 0.6210 -0.0378 30 1 11.3839 -1.0939 -1.6205 31 1 11.7575 0.3718 -0.5654 32 1 10.7626 -0.8185 1.4421 33 1 10.3885 -2.2850 0.3880 34 1 5.1933 -1.6820 1.3097 35 1 2.7339 -1.6921 1.3171 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299511402.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:35:52 Heat of formation + Delta-G solvation = 58.109176 kcal Electronic energy + Delta-G solvation = -19708.344252 eV Core-core repulsion = 16672.898811 eV Total energy + Delta-G solvation = -3035.445441 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.111 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -39.51763 -38.37808 -36.48536 -35.94347 -33.07086 -32.27312 -30.90555 -30.87935 -27.94444 -24.88461 -22.56389 -22.45244 -21.72137 -21.15014 -19.24774 -18.73171 -16.47727 -16.09111 -15.48267 -15.42135 -14.66067 -14.39087 -14.24828 -13.88521 -13.77621 -13.51734 -13.25862 -12.91794 -12.72708 -12.62703 -12.05019 -11.75590 -11.52014 -11.13961 -11.09188 -10.91789 -10.88434 -10.82342 -10.50979 -10.22396 -10.00651 -9.77999 -8.79874 -8.77728 -8.52320 -8.00930 -7.05930 -6.14401 -3.90003 0.97507 1.58277 2.73483 3.08902 3.28711 3.36196 3.39397 3.98037 4.05082 4.08934 4.26402 4.72341 4.82115 5.01263 5.03637 5.12964 5.26595 5.52990 5.58323 5.60946 5.66013 5.72662 5.86236 5.90090 6.06810 6.11640 6.18376 6.23839 6.38468 6.45656 6.47462 6.70208 6.86060 6.89639 7.04761 7.55499 7.59058 8.24168 9.03103 9.11904 9.62949 10.25050 10.94679 Molecular weight = 270.11amu Principal moments of inertia in cm(-1) A = 0.019558 B = 0.005459 C = 0.004605 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1431.271041 B = 5127.743052 C = 6079.124155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.439 5.439 2 C 0.267 3.733 3 C -0.052 4.052 4 C -0.068 4.068 5 C -0.104 4.104 6 C -0.006 4.006 7 C -0.109 4.109 8 C 0.486 3.514 9 O -0.524 6.524 10 N -0.428 5.428 11 C -0.350 4.350 12 H 0.076 0.924 13 C 0.076 3.924 14 N -0.833 5.833 15 Si 0.912 3.088 16 H -0.274 1.274 17 H -0.286 1.286 18 H -0.278 1.278 19 C 0.074 3.926 20 C -0.174 4.174 21 C -0.208 4.208 22 C -0.111 4.111 23 C -0.069 4.069 24 H 0.127 0.873 25 H 0.132 0.868 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.265 0.735 29 H 0.103 0.897 30 H 0.107 0.893 31 H 0.083 0.917 32 H 0.084 0.916 33 H 0.090 0.910 34 H 0.130 0.870 35 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.326 3.841 9.506 10.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.115 5.115 2 C -0.048 4.048 3 C -0.055 4.055 4 C -0.088 4.088 5 C -0.122 4.122 6 C -0.008 4.008 7 C -0.149 4.149 8 C 0.273 3.727 9 O -0.401 6.401 10 N -0.150 5.150 11 C -0.476 4.476 12 H 0.094 0.906 13 C -0.135 4.135 14 N -0.466 5.466 15 Si 0.739 3.261 16 H -0.200 1.200 17 H -0.212 1.212 18 H -0.204 1.204 19 C -0.032 4.032 20 C -0.212 4.212 21 C -0.247 4.247 22 C -0.129 4.129 23 C -0.090 4.090 24 H 0.145 0.855 25 H 0.149 0.851 26 H 0.106 0.894 27 H 0.107 0.893 28 H 0.075 0.925 29 H 0.120 0.880 30 H 0.125 0.875 31 H 0.102 0.898 32 H 0.102 0.898 33 H 0.109 0.891 34 H 0.148 0.852 35 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.048 3.604 8.964 9.876 hybrid contribution 0.727 -0.540 -0.761 1.182 sum -1.322 3.064 8.203 8.856 Atomic orbital electron populations 1.81202 1.12216 1.08773 1.09311 1.25843 0.92765 0.93109 0.93042 1.15925 0.83883 1.01047 1.04680 1.21055 0.94253 0.96894 0.96612 1.20967 0.93257 0.99593 0.98394 1.19775 0.95295 0.92895 0.92801 1.20865 0.91333 1.02071 1.00671 1.19548 0.82946 0.84605 0.85572 1.90568 1.53978 1.48724 1.46820 1.42749 1.02190 1.42834 1.27190 1.18781 1.21876 1.18622 0.88339 0.90625 1.25212 0.95112 0.95768 0.97410 1.69795 1.31570 1.26055 1.19215 0.86290 0.77709 0.82414 0.79697 1.19963 1.21206 1.20402 1.21716 0.88680 0.95645 0.97174 1.23067 0.95737 1.02597 0.99760 1.23330 1.07176 0.99719 0.94481 1.20915 0.93298 0.98453 1.00254 1.21022 0.94201 0.96494 0.97267 0.85456 0.85053 0.89352 0.89320 0.92543 0.87983 0.87510 0.89826 0.89795 0.89127 0.85246 0.85491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -7.02 18.54 41.84 0.78 -6.25 16 2 C 0.27 3.83 15.33 -22.47 -0.34 3.49 16 3 C -0.05 -0.71 5.73 -106.93 -0.61 -1.32 16 4 C -0.07 -0.92 9.76 -39.17 -0.38 -1.30 16 5 C -0.10 -1.57 9.68 -39.64 -0.38 -1.95 16 6 C -0.01 -0.10 4.38 -104.53 -0.46 -0.56 16 7 C -0.11 -1.81 4.44 -29.03 -0.13 -1.94 16 8 C 0.49 11.24 6.96 -10.99 -0.08 11.17 16 9 O -0.52 -14.39 13.81 5.55 0.08 -14.31 16 10 N -0.43 -9.97 2.83 -107.73 -0.31 -10.28 16 11 C -0.35 -9.11 7.91 -14.93 -0.12 -9.22 16 12 H 0.08 1.92 7.26 -52.49 -0.38 1.54 16 13 C 0.08 2.05 4.39 -17.46 -0.08 1.98 16 14 N -0.83 -23.70 11.75 55.50 0.65 -23.04 16 15 Si 0.91 21.43 29.59 -169.99 -5.03 16.40 16 16 H -0.27 -6.57 7.11 56.52 0.40 -6.17 16 17 H -0.29 -6.76 7.11 56.52 0.40 -6.35 16 18 H -0.28 -6.23 7.11 56.52 0.40 -5.82 16 19 C 0.07 1.35 5.87 -67.93 -0.40 0.95 16 20 C -0.17 -2.92 9.80 -26.70 -0.26 -3.19 16 21 C -0.21 -3.25 10.36 -26.70 -0.28 -3.53 16 22 C -0.11 -1.58 9.68 -39.64 -0.38 -1.96 16 23 C -0.07 -0.90 9.76 -39.17 -0.38 -1.28 16 24 H 0.13 1.46 8.06 -52.48 -0.42 1.03 16 25 H 0.13 1.91 8.06 -52.49 -0.42 1.49 16 26 H 0.09 1.33 7.50 -51.93 -0.39 0.94 16 27 H 0.09 1.25 8.05 -51.93 -0.42 0.83 16 28 H 0.26 7.29 8.32 -40.82 -0.34 6.95 16 29 H 0.10 1.61 6.96 -51.93 -0.36 1.25 16 30 H 0.11 2.03 6.73 -51.93 -0.35 1.68 16 31 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 32 H 0.08 1.07 8.14 -51.92 -0.42 0.64 16 33 H 0.09 1.54 8.14 -51.93 -0.42 1.11 16 34 H 0.13 1.63 8.06 -52.48 -0.42 1.21 16 35 H 0.13 1.35 8.06 -52.49 -0.42 0.93 16 LS Contribution 313.36 15.07 4.72 4.72 Total: -1.00 -32.01 313.36 -7.39 -39.40 By element: Atomic # 1 Polarization: 6.01 SS G_CDS: -3.99 Total: 2.02 kcal Atomic # 6 Polarization: -4.38 SS G_CDS: -4.28 Total: -8.67 kcal Atomic # 7 Polarization: -40.69 SS G_CDS: 1.12 Total: -39.57 kcal Atomic # 8 Polarization: -14.39 SS G_CDS: 0.08 Total: -14.31 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.03 Total: 16.40 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -32.01 -7.39 -39.40 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299511402.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.512 kcal (2) G-P(sol) polarization free energy of solvation -32.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.403 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds