Wall clock time and date at job start Mon Mar 30 2020 00:58:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46494 * 109.47006 * 2 1 4 4 C 1.46504 * 119.99999 * 274.94634 * 3 2 1 5 5 C 1.50697 * 109.47327 * 262.80068 * 4 3 2 6 6 H 1.08004 * 120.00332 * 0.02562 * 5 4 3 7 7 C 1.37879 * 119.99954 * 179.97438 * 5 4 3 8 8 N 1.31513 * 120.00417 * 0.02562 * 7 5 4 9 9 Si 1.86809 * 119.99946 * 180.02562 * 7 5 4 10 10 H 1.48504 * 109.46808 * 0.02562 * 9 7 5 11 11 H 1.48501 * 109.46963 * 119.99953 * 9 7 5 12 12 H 1.48492 * 109.47291 * 240.00351 * 9 7 5 13 13 C 1.34772 * 120.00306 * 94.95253 * 3 2 1 14 14 O 1.21548 * 119.99712 * 3.22864 * 13 3 2 15 15 C 1.47882 * 120.00340 * 183.22738 * 13 3 2 16 16 N 1.32844 * 119.71888 * 353.93548 * 15 13 3 17 17 C 1.31368 * 121.68938 * 179.97438 * 16 15 13 18 18 C 1.39005 * 120.93207 * 0.02562 * 17 16 15 19 19 F 1.35096 * 120.32850 * 180.02562 * 18 17 16 20 20 C 1.38721 * 119.33944 * 0.02562 * 18 17 16 21 21 C 1.38828 * 118.45211 * 359.97438 * 20 18 17 22 22 F 1.35102 * 120.48658 * 179.97438 * 21 20 18 23 23 H 1.08999 * 109.47194 * 180.02562 * 1 2 3 24 24 H 1.08996 * 109.46885 * 300.00322 * 1 2 3 25 25 H 1.09003 * 109.46703 * 59.99758 * 1 2 3 26 26 H 1.08996 * 109.46885 * 239.99678 * 2 1 3 27 27 H 1.08996 * 109.46938 * 119.99952 * 2 1 3 28 28 H 1.08998 * 109.47063 * 22.80081 * 4 3 2 29 29 H 1.08999 * 109.47446 * 142.80085 * 4 3 2 30 30 H 0.96999 * 120.00601 * 179.97438 * 8 7 5 31 31 H 1.07998 * 119.53907 * 180.28649 * 17 16 15 32 32 H 1.08004 * 120.77344 * 179.97438 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1594 2.1083 -1.2640 5 6 3.5904 2.0323 -1.7303 6 1 4.3217 1.4958 -1.1440 7 6 3.9659 2.6470 -2.9060 8 7 3.0754 3.3000 -3.6203 9 14 5.7396 2.5523 -3.4844 10 1 6.5367 1.7649 -2.5097 11 1 5.7922 1.8925 -4.8138 12 1 6.2998 3.9234 -3.5898 13 6 2.3380 1.9830 1.1628 14 8 2.2772 1.3614 2.2055 15 6 2.7627 3.3995 1.1700 16 7 2.9439 4.0386 0.0196 17 6 3.3201 5.2966 -0.0191 18 6 3.5450 6.0115 1.1516 19 9 3.9311 7.3050 1.0975 20 6 3.3689 5.3836 2.3759 21 6 2.9708 4.0536 2.3859 22 9 2.7876 3.4018 3.5550 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8900 28 1 1.5083 1.6609 -2.0151 29 1 1.8803 3.1515 -1.1162 30 1 3.3396 3.7327 -4.4472 31 1 3.4526 5.7836 -0.9740 32 1 3.5375 5.9169 3.2998 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000429595169.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:58:42 Heat of formation + Delta-G solvation = -82.393342 kcal Electronic energy + Delta-G solvation = -21063.396184 eV Core-core repulsion = 17467.628566 eV Total energy + Delta-G solvation = -3595.767617 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.092 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -50.19055 -50.12745 -41.60590 -39.94684 -37.01003 -34.61420 -33.64607 -32.45541 -31.24773 -28.85145 -26.11367 -25.10082 -24.79023 -23.68552 -20.88027 -19.35913 -19.19801 -18.62380 -18.08832 -17.36664 -17.15684 -16.95305 -16.53659 -16.46527 -16.11883 -15.75798 -15.44784 -14.83759 -14.60987 -14.37464 -14.25727 -14.04456 -13.60562 -13.46523 -13.09537 -13.05811 -12.65488 -12.59592 -12.15146 -11.81201 -11.60553 -11.19849 -10.96571 -10.58149 -10.11109 -9.99368 -9.39640 -8.04017 -6.09674 -0.73390 -0.17054 1.40440 1.45500 1.52650 1.59981 2.09581 2.46936 2.54939 2.58682 2.89124 3.14530 3.28786 3.48414 3.51523 3.92402 4.15799 4.29390 4.38967 4.47875 4.55407 4.69175 4.83924 4.99027 5.11401 5.26896 5.33699 5.57679 5.89978 5.90750 6.28049 6.48737 6.59734 6.95416 7.19419 7.54062 9.03006 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.012704 B = 0.010132 C = 0.006372 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2203.541078 B = 2762.827866 C = 4392.948544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.102 3.898 3 N -0.578 5.578 4 C 0.240 3.760 5 C -0.505 4.505 6 H 0.033 0.967 7 C 0.037 3.963 8 N -0.910 5.910 9 Si 0.935 3.065 10 H -0.283 1.283 11 H -0.282 1.282 12 H -0.276 1.276 13 C 0.556 3.444 14 O -0.580 6.580 15 C 0.013 3.987 16 N -0.358 5.358 17 C 0.055 3.945 18 C 0.114 3.886 19 F -0.111 7.111 20 C -0.145 4.145 21 C 0.125 3.875 22 F -0.111 7.111 23 H 0.091 0.909 24 H 0.044 0.956 25 H 0.053 0.947 26 H 0.080 0.920 27 H 0.074 0.926 28 H 0.011 0.989 29 H 0.079 0.921 30 H 0.263 0.737 31 H 0.184 0.816 32 H 0.201 0.799 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.412 4.893 7.707 9.238 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.020 4.020 3 N -0.306 5.306 4 C 0.120 3.880 5 C -0.544 4.544 6 H 0.051 0.949 7 C -0.163 4.163 8 N -0.550 5.550 9 Si 0.762 3.238 10 H -0.208 1.208 11 H -0.208 1.208 12 H -0.201 1.201 13 C 0.343 3.657 14 O -0.462 6.462 15 C -0.125 4.125 16 N -0.068 5.068 17 C -0.107 4.107 18 C 0.092 3.908 19 F -0.089 7.089 20 C -0.171 4.171 21 C 0.102 3.898 22 F -0.089 7.089 23 H 0.110 0.890 24 H 0.063 0.937 25 H 0.072 0.928 26 H 0.098 0.902 27 H 0.092 0.908 28 H 0.029 0.971 29 H 0.096 0.904 30 H 0.072 0.928 31 H 0.201 0.799 32 H 0.218 0.782 Dipole moment (debyes) X Y Z Total from point charges -1.631 4.169 7.311 8.573 hybrid contribution 1.232 0.420 0.225 1.321 sum -0.399 4.589 7.536 8.832 Atomic orbital electron populations 1.22014 0.94225 1.03306 1.01393 1.21567 0.95570 0.82088 1.02770 1.48306 1.60265 1.14315 1.07692 1.19830 0.95731 0.94102 0.78303 1.21311 0.94875 1.32200 1.06056 0.94894 1.25240 0.99553 0.95043 0.96455 1.69993 1.34450 1.35323 1.15250 0.85885 0.82129 0.77909 0.77902 1.20804 1.20801 1.20111 1.17909 0.78159 0.85709 0.83926 1.90712 1.57349 1.65679 1.32445 1.21522 1.05540 0.96398 0.89043 1.68857 1.05736 1.07911 1.24264 1.23595 0.97936 0.90233 0.98984 1.18734 0.97965 0.79985 0.94127 1.91577 1.87698 1.32595 1.97073 1.21730 1.02419 0.92426 1.00567 1.18467 0.98974 0.91009 0.81327 1.91588 1.91923 1.80944 1.44452 0.89006 0.93668 0.92786 0.90190 0.90790 0.97120 0.90393 0.92757 0.79937 0.78209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -4.64 10.24 71.98 0.74 -3.90 16 2 C 0.10 3.79 6.17 86.38 0.53 4.32 16 3 N -0.58 -25.33 2.48 -829.55 -2.06 -27.39 16 4 C 0.24 11.57 4.79 85.63 0.41 11.98 16 5 C -0.51 -26.22 7.99 25.60 0.20 -26.02 16 6 H 0.03 1.81 7.81 -2.91 -0.02 1.79 16 7 C 0.04 1.91 5.46 84.66 0.46 2.37 16 8 N -0.91 -48.15 13.29 21.45 0.28 -47.87 16 9 Si 0.93 41.64 29.54 68.60 2.03 43.67 16 10 H -0.28 -12.86 7.11 99.48 0.71 -12.15 16 11 H -0.28 -12.41 7.11 99.48 0.71 -11.71 16 12 H -0.28 -11.85 7.11 99.48 0.71 -11.15 16 13 C 0.56 24.73 7.58 86.80 0.66 25.38 16 14 O -0.58 -27.11 14.82 -3.87 -0.06 -27.17 16 15 C 0.01 0.52 6.63 41.88 0.28 0.80 16 16 N -0.36 -14.42 4.98 -184.60 -0.92 -15.34 16 17 C 0.05 1.78 11.17 84.95 0.95 2.73 16 18 C 0.11 2.99 7.35 22.57 0.17 3.15 16 19 F -0.11 -2.58 17.28 44.97 0.78 -1.80 16 20 C -0.15 -3.58 10.14 22.53 0.23 -3.36 16 21 C 0.13 4.16 7.31 22.75 0.17 4.32 16 22 F -0.11 -3.87 15.56 44.97 0.70 -3.17 16 23 H 0.09 2.20 8.14 -2.39 -0.02 2.18 16 24 H 0.04 1.44 8.14 -2.39 -0.02 1.42 16 25 H 0.05 1.69 8.14 -2.39 -0.02 1.67 16 26 H 0.08 2.89 8.11 -2.39 -0.02 2.87 16 27 H 0.07 2.74 7.24 -2.39 -0.02 2.73 16 28 H 0.01 0.55 8.02 -2.39 -0.02 0.53 16 29 H 0.08 3.87 5.21 -4.04 -0.02 3.85 16 30 H 0.26 13.25 8.31 -92.71 -0.77 12.48 16 31 H 0.18 5.61 8.06 -2.91 -0.02 5.59 16 32 H 0.20 3.26 8.06 -2.91 -0.02 3.24 16 Total: -1.00 -60.63 289.34 6.69 -53.94 By element: Atomic # 1 Polarization: 2.20 SS G_CDS: 1.15 Total: 3.35 kcal Atomic # 6 Polarization: 16.99 SS G_CDS: 4.79 Total: 21.78 kcal Atomic # 7 Polarization: -87.90 SS G_CDS: -2.69 Total: -90.59 kcal Atomic # 8 Polarization: -27.11 SS G_CDS: -0.06 Total: -27.17 kcal Atomic # 9 Polarization: -6.45 SS G_CDS: 1.48 Total: -4.97 kcal Atomic # 14 Polarization: 41.64 SS G_CDS: 2.03 Total: 43.67 kcal Total: -60.63 6.69 -53.94 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000429595169.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.454 kcal (2) G-P(sol) polarization free energy of solvation -60.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds