Wall clock time and date at job start Mon Mar 30 2020 01:34:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13608 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39772 * 119.97999 * 169.90867 * 3 2 1 5 5 C 1.37101 * 120.02121 * 179.97438 * 4 3 2 6 6 C 1.39937 * 119.98069 * 0.02562 * 5 4 3 7 7 C 1.47170 * 120.02055 * 179.97438 * 6 5 4 8 8 C 1.34808 * 120.00124 * 136.33867 * 7 6 5 9 9 C 1.46530 * 119.99932 * 349.02594 * 8 7 6 10 10 O 1.21678 * 119.99576 * 353.22403 * 9 8 7 11 11 N 1.34774 * 119.99738 * 172.94307 * 9 8 7 12 12 C 1.46497 * 119.99818 * 180.27611 * 11 9 8 13 13 C 1.52999 * 109.47008 * 180.02562 * 12 11 9 14 14 C 1.50705 * 109.47100 * 180.02562 * 13 12 11 15 15 H 1.08004 * 119.99881 * 359.97438 * 14 13 12 16 16 C 1.37880 * 120.00218 * 180.02562 * 14 13 12 17 17 N 1.31517 * 119.99786 * 359.97438 * 16 14 13 18 18 Si 1.86802 * 120.00006 * 180.02562 * 16 14 13 19 19 H 1.48501 * 109.47127 * 59.99816 * 18 16 14 20 20 H 1.48500 * 109.46949 * 179.97438 * 18 16 14 21 21 H 1.48496 * 109.46944 * 299.99511 * 18 16 14 22 22 C 1.39934 * 119.95907 * 0.25531 * 6 5 4 23 23 C 1.37109 * 119.98022 * 359.45930 * 22 6 5 24 24 H 1.08008 * 119.98990 * 359.97438 * 4 3 2 25 25 H 1.08007 * 120.01146 * 180.02562 * 5 4 3 26 26 H 1.08007 * 120.00101 * 316.33372 * 7 6 5 27 27 H 1.08005 * 120.00052 * 169.03513 * 8 7 6 28 28 H 0.97006 * 119.99915 * 0.28210 * 11 9 8 29 29 H 1.09001 * 109.47371 * 300.00160 * 12 11 9 30 30 H 1.09003 * 109.46913 * 60.00609 * 12 11 9 31 31 H 1.08996 * 109.47651 * 299.99849 * 13 12 11 32 32 H 1.08999 * 109.47417 * 60.00569 * 13 12 11 33 33 H 0.96993 * 119.99825 * 179.97438 * 17 16 14 34 34 H 1.08005 * 120.00645 * 179.74891 * 22 6 5 35 35 H 1.08003 * 119.98888 * 180.25596 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2660 1.1929 -0.2121 5 6 4.6370 1.1946 -0.2118 6 6 5.3377 0.0020 0.0005 7 6 6.8094 0.0027 0.0005 8 6 7.4838 -0.6872 0.9420 9 6 6.7715 -1.2362 2.0989 10 8 5.5981 -0.9666 2.2749 11 7 7.4146 -2.0443 2.9648 12 6 6.7008 -2.5980 4.1181 13 6 7.6531 -3.4742 4.9345 14 6 6.9187 -4.0443 6.1206 15 1 5.8771 -3.8053 6.2768 16 6 7.5768 -4.8703 7.0071 17 7 8.8453 -5.1610 6.8172 18 14 6.6663 -5.5775 8.4769 19 1 5.5230 -6.3982 8.0028 20 1 7.5905 -6.4278 9.2693 21 1 6.1614 -4.4692 9.3265 22 6 4.6381 -1.1922 0.2070 23 6 3.2671 -1.1910 0.2121 24 1 2.7250 2.1132 -0.3764 25 1 5.1761 2.1161 -0.3753 26 1 7.3492 0.5560 -0.7539 27 1 8.5491 -0.8352 0.8437 28 1 8.3501 -2.2592 2.8244 29 1 6.3317 -1.7840 4.7421 30 1 5.8607 -3.1995 3.7709 31 1 8.0226 -4.2882 4.3110 32 1 8.4929 -2.8724 5.2818 33 1 9.3083 -5.7417 7.4410 34 1 5.1782 -2.1138 0.3668 35 1 2.7270 -2.1119 0.3755 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000492424538.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:34:43 Heat of formation + Delta-G solvation = 33.398982 kcal Electronic energy + Delta-G solvation = -18719.272587 eV Core-core repulsion = 15682.755631 eV Total energy + Delta-G solvation = -3036.516955 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.111 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.09676 -38.83855 -36.57496 -35.05104 -33.81708 -32.89379 -31.24632 -30.52375 -29.36347 -25.53647 -24.19838 -22.79568 -22.04922 -20.86008 -19.40307 -19.01766 -17.36340 -16.41644 -15.74182 -15.41585 -15.08892 -14.74032 -14.49149 -14.32183 -14.22067 -13.86377 -13.65986 -13.20341 -13.01796 -12.86591 -12.70565 -12.32554 -12.24137 -11.61442 -11.25285 -11.22042 -11.05155 -10.68857 -10.37871 -10.10604 -9.81449 -9.55457 -9.30523 -9.06097 -8.54121 -8.36483 -8.22009 -6.12625 -4.15695 0.32645 1.36968 1.47685 2.57765 2.94693 3.29258 3.33259 3.36166 3.50529 3.69102 3.79469 3.88404 4.39397 4.52247 4.72399 4.77645 4.98291 5.19545 5.23795 5.24546 5.43799 5.63563 5.82209 5.87319 5.99933 6.19532 6.25831 6.29346 6.31371 6.47377 6.68536 6.73468 6.85100 7.38942 7.47249 7.56911 7.85263 7.95587 8.23817 8.58291 8.90127 9.49464 10.98906 Molecular weight = 270.11amu Principal moments of inertia in cm(-1) A = 0.021232 B = 0.003567 C = 0.003122 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1318.469253 B = 7846.904892 C = 8967.344747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.430 5.430 2 C 0.260 3.740 3 C -0.029 4.029 4 C -0.082 4.082 5 C -0.107 4.107 6 C -0.030 4.030 7 C -0.049 4.049 8 C -0.189 4.189 9 C 0.524 3.476 10 O -0.538 6.538 11 N -0.713 5.713 12 C 0.121 3.879 13 C 0.013 3.987 14 C -0.523 4.523 15 H 0.059 0.941 16 C 0.060 3.940 17 N -0.894 5.894 18 Si 0.897 3.103 19 H -0.275 1.275 20 H -0.287 1.287 21 H -0.275 1.275 22 C -0.038 4.038 23 C -0.079 4.079 24 H 0.128 0.872 25 H 0.130 0.870 26 H 0.139 0.861 27 H 0.135 0.865 28 H 0.398 0.602 29 H 0.057 0.943 30 H 0.057 0.943 31 H 0.022 0.978 32 H 0.022 0.978 33 H 0.263 0.737 34 H 0.125 0.875 35 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.343 10.940 -16.961 20.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.105 5.105 2 C -0.054 4.054 3 C -0.033 4.033 4 C -0.102 4.102 5 C -0.125 4.125 6 C -0.031 4.031 7 C -0.069 4.069 8 C -0.210 4.210 9 C 0.311 3.689 10 O -0.418 6.418 11 N -0.362 5.362 12 C -0.001 4.001 13 C -0.025 4.025 14 C -0.562 4.562 15 H 0.077 0.923 16 C -0.142 4.142 17 N -0.533 5.533 18 Si 0.724 3.276 19 H -0.201 1.201 20 H -0.212 1.212 21 H -0.201 1.201 22 C -0.056 4.056 23 C -0.100 4.100 24 H 0.146 0.854 25 H 0.148 0.852 26 H 0.156 0.844 27 H 0.153 0.847 28 H 0.232 0.768 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.040 0.960 32 H 0.040 0.960 33 H 0.072 0.928 34 H 0.143 0.857 35 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -3.797 10.991 -16.703 20.352 hybrid contribution 0.686 -0.571 1.009 1.347 sum -3.111 10.421 -15.694 19.094 Atomic orbital electron populations 1.81230 1.12190 1.07707 1.09397 1.25847 0.92803 0.93450 0.93342 1.16044 0.83974 0.95514 1.07724 1.20786 0.94219 0.96315 0.98911 1.20937 0.93475 0.97430 1.00658 1.19116 0.92951 0.93660 0.97339 1.22326 0.92369 0.95009 0.97163 1.23269 1.00946 1.01228 0.95559 1.18512 0.87079 0.79529 0.83760 1.90856 1.15673 1.59966 1.75350 1.46357 1.15036 1.47750 1.27028 1.21732 0.96233 0.97045 0.85078 1.19317 0.94504 0.94179 0.94473 1.21013 0.97274 1.29273 1.08641 0.92317 1.24991 0.94899 0.96205 0.98122 1.69939 1.09344 1.36694 1.37332 0.86576 0.79530 0.79120 0.82352 1.20089 1.21217 1.20089 1.20913 0.93270 0.97775 0.93663 1.20835 0.94269 0.96631 0.98235 0.85379 0.85161 0.84353 0.84747 0.76823 0.92480 0.92455 0.95958 0.95973 0.92756 0.85662 0.85303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -6.28 18.54 41.84 0.78 -5.50 16 2 C 0.26 3.29 15.32 -22.47 -0.34 2.94 16 3 C -0.03 -0.33 5.74 -106.83 -0.61 -0.94 16 4 C -0.08 -0.77 9.71 -39.42 -0.38 -1.16 16 5 C -0.11 -0.97 9.75 -39.36 -0.38 -1.35 16 6 C -0.03 -0.31 4.53 -105.00 -0.48 -0.79 16 7 C -0.05 -0.42 9.80 -37.17 -0.36 -0.78 16 8 C -0.19 -1.89 9.91 -37.46 -0.37 -2.26 16 9 C 0.52 7.66 6.79 -12.92 -0.09 7.57 16 10 O -0.54 -9.39 12.16 5.21 0.06 -9.33 16 11 N -0.71 -11.22 5.55 -61.67 -0.34 -11.56 16 12 C 0.12 2.43 5.61 -4.04 -0.02 2.41 16 13 C 0.01 0.30 5.09 -27.88 -0.14 0.16 16 14 C -0.52 -14.23 9.11 -34.44 -0.31 -14.54 16 15 H 0.06 1.57 7.74 -52.48 -0.41 1.16 16 16 C 0.06 1.65 5.46 -17.82 -0.10 1.55 16 17 N -0.89 -25.72 13.29 55.43 0.74 -24.98 16 18 Si 0.90 21.14 29.54 -169.99 -5.02 16.11 16 19 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 20 H -0.29 -6.67 7.11 56.52 0.40 -6.27 16 21 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 22 C -0.04 -0.45 6.56 -39.36 -0.26 -0.71 16 23 C -0.08 -0.92 9.71 -39.42 -0.38 -1.30 16 24 H 0.13 0.94 8.06 -52.48 -0.42 0.52 16 25 H 0.13 0.83 8.06 -52.48 -0.42 0.41 16 26 H 0.14 0.71 8.06 -52.48 -0.42 0.28 16 27 H 0.13 0.95 8.06 -52.48 -0.42 0.53 16 28 H 0.40 5.35 8.45 -40.82 -0.35 5.01 16 29 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 30 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 31 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.02 0.55 8.14 -51.93 -0.42 0.13 16 33 H 0.26 7.16 8.31 -40.82 -0.34 6.83 16 34 H 0.13 1.52 7.02 -52.48 -0.37 1.15 16 35 H 0.13 1.36 8.06 -52.48 -0.42 0.94 16 LS Contribution 317.87 15.07 4.79 4.79 Total: -1.00 -32.01 317.87 -7.30 -39.31 By element: Atomic # 1 Polarization: 4.41 SS G_CDS: -4.06 Total: 0.35 kcal Atomic # 6 Polarization: -4.96 SS G_CDS: -4.24 Total: -9.20 kcal Atomic # 7 Polarization: -43.21 SS G_CDS: 1.17 Total: -42.04 kcal Atomic # 8 Polarization: -9.39 SS G_CDS: 0.06 Total: -9.33 kcal Atomic # 14 Polarization: 21.14 SS G_CDS: -5.02 Total: 16.11 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -32.01 -7.30 -39.31 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000492424538.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.711 kcal (2) G-P(sol) polarization free energy of solvation -32.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.312 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.399 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds