Wall clock time and date at job start Mon Mar 30 2020 01:04:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.46500 * 120.00296 * 2 1 4 4 C 1.50700 * 109.47384 * 269.99970 * 3 2 1 5 5 H 1.08001 * 119.99757 * 359.97438 * 4 3 2 6 6 C 1.37872 * 120.00254 * 179.97438 * 4 3 2 7 7 N 1.31517 * 119.99968 * 0.02562 * 6 4 3 8 8 Si 1.86797 * 120.00201 * 179.97438 * 6 4 3 9 9 H 1.48506 * 109.47142 * 90.00278 * 8 6 4 10 10 H 1.48508 * 109.47472 * 210.00134 * 8 6 4 11 11 H 1.48501 * 109.47212 * 330.00363 * 8 6 4 12 12 C 1.34776 * 120.00158 * 180.02562 * 2 1 3 13 13 O 1.21554 * 120.00265 * 184.80880 * 12 2 1 14 14 C 1.47842 * 119.99696 * 4.80118 * 12 2 1 15 15 C 1.40025 * 120.55999 * 321.82422 * 14 12 2 16 16 C 1.38354 * 118.28689 * 179.70223 * 15 14 12 17 17 C 1.38356 * 119.30710 * 0.27632 * 16 15 14 18 18 C 1.50698 * 119.46337 * 179.97438 * 17 16 15 19 19 F 1.39898 * 109.47046 * 210.00264 * 18 17 16 20 20 F 1.39900 * 109.47102 * 330.00417 * 18 17 16 21 21 N 1.31931 * 121.07399 * 359.97438 * 17 16 15 22 22 C 1.31685 * 121.88256 * 0.02562 * 21 17 16 23 23 H 1.09000 * 109.47188 * 264.87569 * 1 2 3 24 24 H 1.09003 * 109.46658 * 24.87694 * 1 2 3 25 25 H 1.08999 * 109.47221 * 144.87267 * 1 2 3 26 26 H 1.09007 * 109.46957 * 30.00210 * 3 2 1 27 27 H 1.09003 * 109.47223 * 150.00006 * 3 2 1 28 28 H 0.97006 * 120.00026 * 179.97438 * 7 6 4 29 29 H 1.07999 * 120.85439 * 359.97438 * 15 14 12 30 30 H 1.08001 * 120.34931 * 180.25481 * 16 15 14 31 31 H 1.09004 * 109.46875 * 90.00234 * 18 17 16 32 32 H 1.08002 * 119.71751 * 180.02562 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4488 1.7038 -1.4208 5 1 2.0982 1.0958 -2.2417 6 6 3.1261 2.8779 -1.6727 7 7 3.5535 3.6180 -0.6731 8 14 3.4381 3.4168 -3.4338 9 1 2.3080 4.2592 -3.9014 10 1 4.6982 4.2003 -3.4960 11 1 3.5562 2.2195 -4.3044 12 6 2.1389 -1.1672 -0.0005 13 8 3.3512 -1.1691 0.0877 14 6 1.4035 -2.4452 -0.1083 15 6 0.1760 -2.6174 0.5430 16 6 -0.4749 -3.8304 0.4052 17 6 0.1049 -4.8271 -0.3596 18 6 -0.6007 -6.1499 -0.5116 19 9 0.3454 -7.1659 -0.6845 20 9 -1.3586 -6.4087 0.6354 21 7 1.2655 -4.6381 -0.9578 22 6 1.9233 -3.5018 -0.8568 23 1 -0.3633 -0.0918 1.0236 24 1 -0.3633 0.9324 -0.4323 25 1 -0.3633 -0.8405 -0.5913 26 1 1.6085 2.0284 0.5139 27 1 3.1500 1.1383 0.5138 28 1 4.0304 4.4439 -0.8503 29 1 -0.2538 -1.8222 1.1341 30 1 -1.4255 -3.9978 0.8897 31 1 -1.2577 -6.1135 -1.3807 32 1 2.8708 -3.3849 -1.3617 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000594259367.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:04:03 Heat of formation + Delta-G solvation = -88.672328 kcal Electronic energy + Delta-G solvation = -19979.851593 eV Core-core repulsion = 16383.811698 eV Total energy + Delta-G solvation = -3596.039894 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 270.092 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -49.24059 -47.24181 -40.68530 -38.64842 -35.16101 -33.29709 -32.34618 -32.21301 -28.18433 -27.33243 -25.94102 -24.10608 -23.20770 -22.29567 -19.40712 -18.02586 -17.76052 -17.63321 -16.83556 -16.63107 -16.21829 -15.47055 -15.01606 -14.64301 -14.55462 -14.09962 -13.88595 -13.80932 -13.55440 -13.43816 -12.98004 -12.59860 -12.40204 -12.26486 -11.83791 -11.52502 -11.29097 -11.00061 -10.68502 -10.25799 -10.04216 -9.95516 -9.74280 -9.39489 -9.11946 -8.52026 -7.85182 -6.13242 -4.19065 0.47028 0.99839 2.98198 3.18604 3.25062 3.32372 3.35740 3.52704 3.76768 3.85985 4.07980 4.37121 4.53531 4.63340 4.67448 4.76074 4.96831 5.05327 5.21755 5.45346 5.46383 5.61801 5.71831 5.88858 6.03643 6.30490 6.87766 7.28834 7.35987 7.56712 7.81976 8.10858 8.16165 8.70397 8.88115 9.46593 10.94875 Molecular weight = 270.09amu Principal moments of inertia in cm(-1) A = 0.036739 B = 0.003982 C = 0.003855 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 761.957321 B = 7029.756301 C = 7261.182409 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.590 5.590 3 C 0.244 3.756 4 C -0.532 4.532 5 H 0.058 0.942 6 C 0.063 3.937 7 N -0.893 5.893 8 Si 0.900 3.100 9 H -0.280 1.280 10 H -0.284 1.284 11 H -0.273 1.273 12 C 0.548 3.452 13 O -0.527 6.527 14 C -0.147 4.147 15 C -0.054 4.054 16 C -0.148 4.148 17 C 0.052 3.948 18 C 0.329 3.671 19 F -0.186 7.186 20 F -0.195 7.195 21 N -0.459 5.459 22 C 0.153 3.847 23 H 0.049 0.951 24 H 0.080 0.920 25 H 0.060 0.940 26 H 0.036 0.964 27 H 0.048 0.952 28 H 0.265 0.735 29 H 0.156 0.844 30 H 0.148 0.852 31 H 0.130 0.870 32 H 0.174 0.826 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.626 -14.534 1.537 19.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 N -0.321 5.321 3 C 0.125 3.875 4 C -0.571 4.571 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.531 5.531 8 Si 0.727 3.273 9 H -0.206 1.206 10 H -0.210 1.210 11 H -0.198 1.198 12 C 0.333 3.667 13 O -0.404 6.404 14 C -0.152 4.152 15 C -0.080 4.080 16 C -0.168 4.168 17 C -0.086 4.086 18 C 0.274 3.726 19 F -0.168 7.168 20 F -0.177 7.177 21 N -0.167 5.167 22 C -0.005 4.005 23 H 0.068 0.932 24 H 0.099 0.901 25 H 0.078 0.922 26 H 0.054 0.946 27 H 0.066 0.934 28 H 0.074 0.926 29 H 0.173 0.827 30 H 0.166 0.834 31 H 0.147 0.853 32 H 0.191 0.809 Dipole moment (debyes) X Y Z Total from point charges -11.519 -15.028 1.159 18.970 hybrid contribution -0.235 1.061 -0.384 1.153 sum -11.754 -13.967 0.774 18.271 Atomic orbital electron populations 1.22006 0.81502 1.03400 0.99953 1.48112 1.06270 1.07616 1.70104 1.19415 0.92774 0.77461 0.97846 1.21403 1.37078 1.06545 0.92069 0.92363 1.24932 0.95153 0.96291 0.97590 1.69929 1.38067 1.14305 1.30828 0.86473 0.77769 0.78653 0.84402 1.20575 1.20976 1.19831 1.17904 0.87154 0.82973 0.78669 1.90793 1.13158 1.86761 1.49718 1.21499 0.96189 0.97454 1.00058 1.22213 0.92635 0.97250 0.95882 1.21765 1.02113 0.93355 0.99565 1.21765 0.93803 0.95864 0.97212 1.20072 0.83768 0.81830 0.86917 1.93037 1.66587 1.61552 1.95579 1.93012 1.76214 1.94523 1.53920 1.67350 1.06313 1.23574 1.19470 1.22958 0.98356 0.85782 0.93430 0.93237 0.90136 0.92168 0.94560 0.93381 0.92562 0.82668 0.83443 0.85293 0.80868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.08 8.87 59.85 0.53 1.62 16 2 N -0.59 -11.90 2.86 -184.08 -0.53 -12.43 16 3 C 0.24 6.12 5.17 -5.19 -0.03 6.10 16 4 C -0.53 -14.61 9.39 -34.44 -0.32 -14.93 16 5 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 6 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 7 N -0.89 -25.86 13.29 55.43 0.74 -25.13 16 8 Si 0.90 21.32 29.54 -169.99 -5.02 16.30 16 9 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 10 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 11 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 12 C 0.55 11.11 7.38 -12.33 -0.09 11.02 16 13 O -0.53 -12.93 16.46 5.32 0.09 -12.85 16 14 C -0.15 -2.30 5.27 -104.82 -0.55 -2.85 16 15 C -0.05 -0.64 7.69 -38.87 -0.30 -0.94 16 16 C -0.15 -1.52 9.42 -39.50 -0.37 -1.89 16 17 C 0.05 0.62 6.58 -82.51 -0.54 0.07 16 18 C 0.33 3.08 5.72 36.00 0.21 3.29 16 19 F -0.19 -2.24 17.05 2.25 0.04 -2.20 16 20 F -0.20 -1.87 16.45 2.25 0.04 -1.83 16 21 N -0.46 -6.55 9.94 -9.14 -0.09 -6.64 16 22 C 0.15 2.34 10.80 -17.13 -0.19 2.15 16 23 H 0.05 0.57 6.87 -51.93 -0.36 0.21 16 24 H 0.08 1.20 8.03 -51.93 -0.42 0.78 16 25 H 0.06 0.75 5.83 -51.93 -0.30 0.44 16 26 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 27 H 0.05 1.37 7.36 -51.93 -0.38 0.98 16 28 H 0.26 7.24 8.31 -40.82 -0.34 6.90 16 29 H 0.16 1.54 5.29 -52.49 -0.28 1.26 16 30 H 0.15 1.07 7.59 -52.49 -0.40 0.67 16 31 H 0.13 0.73 8.14 -51.93 -0.42 0.31 16 32 H 0.17 2.61 8.05 -52.49 -0.42 2.19 16 LS Contribution 290.01 15.07 4.37 4.37 Total: -1.00 -33.03 290.01 -5.06 -38.10 By element: Atomic # 1 Polarization: -0.04 SS G_CDS: -2.94 Total: -2.98 kcal Atomic # 6 Polarization: 7.04 SS G_CDS: -1.75 Total: 5.29 kcal Atomic # 7 Polarization: -44.32 SS G_CDS: 0.12 Total: -44.20 kcal Atomic # 8 Polarization: -12.93 SS G_CDS: 0.09 Total: -12.85 kcal Atomic # 9 Polarization: -4.10 SS G_CDS: 0.08 Total: -4.03 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.02 Total: 16.30 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -33.03 -5.06 -38.10 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000594259367.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.576 kcal (2) G-P(sol) polarization free energy of solvation -33.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.097 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.672 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds