Wall clock time and date at job start Mon Mar 30 2020 01:53:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08996 * 109.47853 * 2 1 4 4 C 1.50699 * 109.47078 * 239.99821 * 2 1 3 5 5 H 1.08003 * 119.99962 * 240.00350 * 4 2 1 6 6 C 1.37874 * 120.00270 * 59.99958 * 4 2 1 7 7 N 1.31516 * 119.99500 * 0.02562 * 6 4 2 8 8 Si 1.86803 * 120.00390 * 179.97438 * 6 4 2 9 9 H 1.48500 * 109.46921 * 60.00425 * 8 6 4 10 10 H 1.48496 * 109.46933 * 180.02562 * 8 6 4 11 11 H 1.48498 * 109.46946 * 300.00108 * 8 6 4 12 12 N 1.46506 * 109.47289 * 119.99984 * 2 1 3 13 13 C 1.34775 * 119.99693 * 275.00198 * 12 2 1 14 14 O 1.21561 * 120.00482 * 359.97438 * 13 12 2 15 15 C 1.47696 * 119.99452 * 179.97438 * 13 12 2 16 16 C 1.39648 * 120.16535 * 359.72163 * 15 13 12 17 17 C 1.37965 * 119.86835 * 179.79207 * 16 15 13 18 18 Cl 1.73599 * 119.90853 * 180.23080 * 17 16 15 19 19 C 1.38572 * 120.18911 * 0.46211 * 17 16 15 20 20 C 1.38187 * 120.32337 * 359.79033 * 19 17 16 21 21 C 1.38315 * 120.13369 * 359.97423 * 20 19 17 22 22 F 1.35101 * 120.09781 * 179.97438 * 21 20 19 23 23 H 1.09002 * 109.47153 * 59.99972 * 1 2 3 24 24 H 1.09001 * 109.46832 * 300.00163 * 1 2 3 25 25 H 1.09004 * 109.47261 * 180.02562 * 1 2 3 26 26 H 0.97002 * 119.99804 * 180.02562 * 7 6 4 27 27 H 0.97000 * 120.00117 * 94.99845 * 12 2 1 28 28 H 1.08006 * 120.06786 * 0.02562 * 16 15 13 29 29 H 1.08002 * 119.83643 * 179.76439 * 19 17 16 30 30 H 1.08004 * 119.92827 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7104 -1.2304 5 1 2.6532 -1.5886 -1.1313 6 6 1.6992 -0.2395 -2.4827 7 7 0.9435 0.8301 -2.6034 8 14 2.3225 -1.1197 -4.0079 9 1 1.8279 -2.5199 -4.0081 10 1 1.8278 -0.4194 -5.2204 11 1 3.8074 -1.1191 -4.0077 12 7 2.0184 -0.6906 1.1962 13 6 2.1470 -0.0182 2.3571 14 8 1.8583 1.1613 2.4117 15 6 2.6389 -0.7147 3.5632 16 6 2.9660 -2.0711 3.5059 17 6 3.4290 -2.7145 4.6351 18 17 3.8416 -4.3992 4.5635 19 6 3.5609 -2.0210 5.8275 20 6 3.2345 -0.6799 5.8944 21 6 2.7738 -0.0204 4.7693 22 9 2.4544 1.2906 4.8357 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 0.5139 0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 0.7089 1.1613 -3.4844 27 1 2.2491 -1.6318 1.1527 28 1 2.8604 -2.6145 2.5784 29 1 3.9203 -2.5313 6.7089 30 1 3.3395 -0.1457 6.8272 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000050336068.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:53:25 Heat of formation + Delta-G solvation = -67.493987 kcal Electronic energy + Delta-G solvation = -18008.924493 eV Core-core repulsion = 14744.420674 eV Total energy + Delta-G solvation = -3264.503820 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.81548 -39.77868 -38.22826 -36.56996 -34.88073 -32.69219 -31.53641 -30.37490 -28.73612 -25.29904 -24.31137 -22.89228 -21.23109 -19.66081 -18.39792 -17.24132 -16.73729 -16.16936 -15.68641 -15.32657 -15.14525 -14.60362 -14.21573 -14.03931 -13.44915 -13.36332 -13.15863 -12.68850 -12.40271 -11.77861 -11.68228 -11.39219 -11.23622 -11.12837 -10.98212 -10.78556 -10.36520 -10.26159 -9.41475 -9.27043 -9.09535 -8.74944 -8.58683 -8.00535 -6.14958 -4.24908 0.54334 0.79683 1.84385 2.88107 3.24563 3.29930 3.30839 3.77762 3.83706 4.06748 4.32567 4.39317 4.57447 4.88615 5.14378 5.18141 5.33493 5.46307 5.74212 5.76797 5.89871 6.43407 6.78895 6.92031 7.09950 7.35185 7.48629 7.64155 7.86128 8.10343 8.53175 8.71025 8.96999 9.42283 10.91023 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.020479 B = 0.005173 C = 0.004281 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1366.958731 B = 5411.730991 C = 6538.698234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.264 3.736 3 H 0.052 0.948 4 C -0.536 4.536 5 H 0.061 0.939 6 C 0.068 3.932 7 N -0.882 5.882 8 Si 0.903 3.097 9 H -0.276 1.276 10 H -0.285 1.285 11 H -0.276 1.276 12 N -0.698 5.698 13 C 0.541 3.459 14 O -0.534 6.534 15 C -0.147 4.147 16 C -0.051 4.051 17 C -0.057 4.057 18 Cl -0.061 7.061 19 C -0.066 4.066 20 C -0.154 4.154 21 C 0.160 3.840 22 F -0.109 7.109 23 H 0.092 0.908 24 H 0.015 0.985 25 H 0.027 0.973 26 H 0.266 0.734 27 H 0.388 0.612 28 H 0.149 0.851 29 H 0.145 0.855 30 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.935 -8.431 15.621 18.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.163 3.837 3 H 0.069 0.931 4 C -0.575 4.575 5 H 0.079 0.921 6 C -0.136 4.136 7 N -0.520 5.520 8 Si 0.730 3.270 9 H -0.201 1.201 10 H -0.211 1.211 11 H -0.201 1.201 12 N -0.346 5.346 13 C 0.325 3.675 14 O -0.412 6.412 15 C -0.151 4.151 16 C -0.071 4.071 17 C -0.084 4.084 18 Cl -0.033 7.033 19 C -0.085 4.085 20 C -0.173 4.173 21 C 0.139 3.861 22 F -0.087 7.087 23 H 0.110 0.890 24 H 0.035 0.965 25 H 0.047 0.953 26 H 0.076 0.924 27 H 0.222 0.778 28 H 0.166 0.834 29 H 0.163 0.837 30 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 4.641 -7.537 15.437 17.794 hybrid contribution 0.403 -0.906 -0.856 1.310 sum 5.044 -8.443 14.580 17.587 Atomic orbital electron populations 1.22086 0.98190 0.99259 1.01076 1.18830 0.91202 0.94093 0.79571 0.93057 1.21148 1.32748 1.13358 0.90228 0.92052 1.24881 0.94738 0.94927 0.99057 1.69892 1.35655 1.22320 1.24090 0.86485 0.79187 0.79577 0.81725 1.20114 1.21087 1.20144 1.46504 1.64309 1.13518 1.10233 1.17862 0.79683 0.86893 0.83071 1.90811 1.50697 1.15015 1.84697 1.20473 1.05334 0.94211 0.95123 1.21199 0.94923 0.92647 0.98288 1.20772 1.05503 0.86628 0.95516 1.98384 1.92145 1.14061 1.98666 1.20998 0.97395 0.93205 0.96860 1.21079 1.03047 0.94856 0.98350 1.17797 0.96116 0.79036 0.93164 1.91621 1.89189 1.31212 1.96654 0.88962 0.96544 0.95346 0.92437 0.77835 0.83363 0.83711 0.83274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.66 9.26 37.16 0.34 -3.32 16 2 C 0.26 6.71 2.56 -69.08 -0.18 6.53 16 3 H 0.05 1.50 7.58 -51.93 -0.39 1.11 16 4 C -0.54 -14.06 8.73 -34.44 -0.30 -14.36 16 5 H 0.06 1.52 7.74 -52.48 -0.41 1.12 16 6 C 0.07 1.80 5.30 -17.82 -0.09 1.71 16 7 N -0.88 -24.69 11.32 55.43 0.63 -24.06 16 8 Si 0.90 20.45 29.54 -169.99 -5.02 15.43 16 9 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 10 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 11 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 12 N -0.70 -14.57 5.02 -55.93 -0.28 -14.85 16 13 C 0.54 11.19 7.73 -12.40 -0.10 11.09 16 14 O -0.53 -13.18 15.00 5.31 0.08 -13.10 16 15 C -0.15 -2.34 5.88 -104.92 -0.62 -2.96 16 16 C -0.05 -0.65 9.31 -39.16 -0.36 -1.02 16 17 C -0.06 -0.62 6.31 -39.56 -0.25 -0.87 16 18 Cl -0.06 -0.61 28.95 -51.86 -1.50 -2.11 16 19 C -0.07 -0.61 9.82 -39.48 -0.39 -0.99 16 20 C -0.15 -1.60 10.01 -39.57 -0.40 -2.00 16 21 C 0.16 2.35 7.28 -38.96 -0.28 2.06 16 22 F -0.11 -1.88 15.55 2.25 0.04 -1.84 16 23 H 0.09 2.48 6.07 -51.93 -0.32 2.16 16 24 H 0.02 0.38 8.14 -51.93 -0.42 -0.04 16 25 H 0.03 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.27 7.06 8.31 -40.82 -0.34 6.73 16 27 H 0.39 6.88 6.57 -40.82 -0.27 6.61 16 28 H 0.15 1.74 6.41 -52.48 -0.34 1.40 16 29 H 0.15 0.91 8.06 -52.49 -0.42 0.49 16 30 H 0.15 1.12 8.06 -52.48 -0.42 0.70 16 LS Contribution 283.97 15.07 4.28 4.28 Total: -1.00 -30.51 283.97 -6.95 -37.45 By element: Atomic # 1 Polarization: 5.47 SS G_CDS: -2.55 Total: 2.93 kcal Atomic # 6 Polarization: -1.51 SS G_CDS: -2.62 Total: -4.13 kcal Atomic # 7 Polarization: -39.26 SS G_CDS: 0.35 Total: -38.91 kcal Atomic # 8 Polarization: -13.18 SS G_CDS: 0.08 Total: -13.10 kcal Atomic # 9 Polarization: -1.88 SS G_CDS: 0.04 Total: -1.84 kcal Atomic # 14 Polarization: 20.45 SS G_CDS: -5.02 Total: 15.43 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.50 Total: -2.11 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -30.51 -6.95 -37.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000050336068.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.040 kcal (2) G-P(sol) polarization free energy of solvation -30.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.454 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds