Wall clock time and date at job start Mon Mar 30 2020 01:52:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09008 * 109.47229 * 2 1 4 4 C 1.50698 * 109.47387 * 119.99899 * 2 1 3 5 5 H 1.07999 * 120.00181 * 119.99635 * 4 2 1 6 6 C 1.37879 * 120.00000 * 300.00183 * 4 2 1 7 7 N 1.31518 * 120.00060 * 359.97438 * 6 4 2 8 8 Si 1.86797 * 120.00038 * 180.02562 * 6 4 2 9 9 H 1.48500 * 109.47474 * 359.97438 * 8 6 4 10 10 H 1.48496 * 109.47309 * 120.00017 * 8 6 4 11 11 H 1.48504 * 109.46796 * 239.99779 * 8 6 4 12 12 N 1.46500 * 109.47098 * 240.00287 * 2 1 3 13 13 C 1.34773 * 120.00431 * 85.00044 * 12 2 1 14 14 O 1.21583 * 119.99900 * 359.97438 * 13 12 2 15 15 C 1.47615 * 120.00097 * 179.72722 * 13 12 2 16 16 C 1.39887 * 120.18103 * 89.99441 * 15 13 12 17 17 F 1.35099 * 120.10095 * 0.02562 * 16 15 13 18 18 C 1.38245 * 119.79602 * 179.74768 * 16 15 13 19 19 C 1.38290 * 120.14888 * 0.53134 * 18 16 15 20 20 C 1.38348 * 120.36576 * 359.73987 * 19 18 16 21 21 C 1.38078 * 120.19993 * 359.97438 * 20 19 18 22 22 Cl 1.73609 * 120.07531 * 179.97438 * 21 20 19 23 23 H 1.08994 * 109.47099 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47061 * 300.00108 * 1 2 3 25 25 H 1.08998 * 109.47099 * 60.00104 * 1 2 3 26 26 H 0.97000 * 120.00268 * 179.97438 * 7 6 4 27 27 H 0.97000 * 119.99456 * 264.99607 * 12 2 1 28 28 H 1.07993 * 119.92610 * 180.27447 * 18 16 15 29 29 H 1.08004 * 119.81582 * 179.72322 * 19 18 16 30 30 H 1.08000 * 119.89897 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7104 1.2304 5 1 2.6532 -1.5885 1.1314 6 6 1.6993 -0.2393 2.4827 7 7 0.9435 0.8303 2.6034 8 14 2.3226 -1.1194 4.0079 9 1 3.1476 -2.2862 3.6038 10 1 3.1473 -0.1856 4.8160 11 1 1.1679 -1.5865 4.8165 12 7 2.0183 -0.6905 -1.1962 13 6 2.1470 -0.0182 -2.3571 14 8 1.8575 1.1613 -2.4119 15 6 2.6448 -0.7126 -3.5609 16 6 1.7481 -1.3404 -4.4320 17 9 0.4221 -1.3130 -4.1748 18 6 2.2225 -1.9839 -5.5598 19 6 3.5801 -2.0171 -5.8212 20 6 4.4731 -1.4032 -4.9611 21 6 4.0150 -0.7512 -3.8335 22 17 5.1385 0.0174 -2.7561 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 0.7089 1.1615 3.4844 27 1 2.2490 -1.6317 -1.1526 28 1 1.5318 -2.4654 -6.2360 29 1 3.9452 -2.5252 -6.7015 30 1 5.5317 -1.4334 -5.1728 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000050391273.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:52:58 Heat of formation + Delta-G solvation = -67.749443 kcal Electronic energy + Delta-G solvation = -18290.650978 eV Core-core repulsion = 15026.136081 eV Total energy + Delta-G solvation = -3264.514897 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.98713 -39.70121 -38.13432 -36.47940 -34.81064 -32.47533 -31.36814 -30.65257 -28.70442 -25.25970 -24.17291 -22.92090 -21.26852 -19.65930 -18.23896 -17.42629 -16.81471 -16.03360 -15.84377 -15.27858 -15.14332 -14.82021 -14.25906 -13.90528 -13.47827 -13.23095 -13.09859 -12.43779 -12.25018 -11.87459 -11.60262 -11.45278 -11.11194 -11.00305 -10.95662 -10.76193 -10.31998 -10.23432 -9.33350 -9.07361 -9.00783 -8.90134 -8.55858 -7.97511 -6.11814 -4.20873 0.71458 0.81736 1.96710 3.12507 3.16288 3.24573 3.32228 3.35200 3.82298 4.07150 4.35667 4.51722 4.80306 4.88207 5.04000 5.20736 5.32702 5.64748 5.75589 5.81585 5.92357 6.45374 6.83139 6.97008 7.14437 7.39400 7.52675 7.68497 7.90308 8.13853 8.57645 8.74472 9.00438 9.45924 10.94364 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.023758 B = 0.005775 C = 0.005168 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1178.256298 B = 4847.280813 C = 5416.818203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.264 3.736 3 H 0.051 0.949 4 C -0.532 4.532 5 H 0.062 0.938 6 C 0.066 3.934 7 N -0.883 5.883 8 Si 0.902 3.098 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.283 1.283 12 N -0.690 5.690 13 C 0.549 3.451 14 O -0.533 6.533 15 C -0.143 4.143 16 C 0.142 3.858 17 F -0.122 7.122 18 C -0.154 4.154 19 C -0.072 4.072 20 C -0.125 4.125 21 C 0.017 3.983 22 Cl -0.036 7.036 23 H 0.027 0.973 24 H 0.092 0.908 25 H 0.015 0.985 26 H 0.264 0.736 27 H 0.390 0.610 28 H 0.145 0.855 29 H 0.144 0.856 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.065 -7.595 -15.573 18.357 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.163 3.837 3 H 0.069 0.931 4 C -0.570 4.570 5 H 0.081 0.919 6 C -0.137 4.137 7 N -0.521 5.521 8 Si 0.729 3.271 9 H -0.197 1.197 10 H -0.209 1.209 11 H -0.209 1.209 12 N -0.337 5.337 13 C 0.331 3.669 14 O -0.411 6.411 15 C -0.148 4.148 16 C 0.121 3.879 17 F -0.100 7.100 18 C -0.173 4.173 19 C -0.090 4.090 20 C -0.144 4.144 21 C -0.011 4.011 22 Cl -0.007 7.007 23 H 0.047 0.953 24 H 0.110 0.890 25 H 0.034 0.966 26 H 0.074 0.926 27 H 0.223 0.777 28 H 0.163 0.837 29 H 0.162 0.838 30 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 5.802 -6.536 -15.288 17.610 hybrid contribution 0.229 -0.830 0.979 1.303 sum 6.031 -7.365 -14.309 17.186 Atomic orbital electron populations 1.22082 0.98217 0.99294 1.01029 1.18838 0.91166 0.94064 0.79603 0.93118 1.21224 1.32399 1.13230 0.90148 0.91936 1.24881 0.94804 0.94952 0.99039 1.69914 1.35908 1.22440 1.23798 0.86385 0.78610 0.79529 0.82534 1.19717 1.20861 1.20858 1.46526 1.63697 1.13540 1.09944 1.17759 0.79272 0.86905 0.82934 1.90790 1.50743 1.15006 1.84555 1.20270 0.92540 1.02604 0.99385 1.17518 0.77683 0.97955 0.94704 1.91581 1.30269 1.94344 1.93798 1.21181 0.97149 1.02022 0.96953 1.21029 0.91720 0.97332 0.98929 1.21069 1.01287 0.98787 0.93287 1.20759 0.89162 0.97642 0.93560 1.98438 1.59783 1.79294 1.63157 0.95335 0.88977 0.96558 0.92604 0.77734 0.83699 0.83811 0.83843 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.78 9.26 37.16 0.34 -3.44 16 2 C 0.26 6.90 2.56 -69.09 -0.18 6.72 16 3 H 0.05 1.52 7.58 -51.92 -0.39 1.12 16 4 C -0.53 -14.26 8.73 -34.44 -0.30 -14.56 16 5 H 0.06 1.61 7.74 -52.49 -0.41 1.20 16 6 C 0.07 1.80 5.30 -17.82 -0.09 1.71 16 7 N -0.88 -25.08 11.32 55.43 0.63 -24.45 16 8 Si 0.90 20.81 29.54 -169.99 -5.02 15.79 16 9 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 10 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 11 H -0.28 -6.47 7.11 56.52 0.40 -6.06 16 12 N -0.69 -15.22 5.07 -55.95 -0.28 -15.50 16 13 C 0.55 11.86 5.92 -12.44 -0.07 11.78 16 14 O -0.53 -13.61 16.77 5.29 0.09 -13.52 16 15 C -0.14 -2.42 5.64 -104.89 -0.59 -3.01 16 16 C 0.14 2.09 7.29 -38.96 -0.28 1.80 16 17 F -0.12 -2.01 16.83 2.25 0.04 -1.97 16 18 C -0.15 -1.59 10.01 -39.56 -0.40 -1.98 16 19 C -0.07 -0.61 10.03 -39.52 -0.40 -1.00 16 20 C -0.13 -1.28 9.81 -39.60 -0.39 -1.67 16 21 C 0.02 0.24 6.35 -39.07 -0.25 -0.01 16 22 Cl -0.04 -0.56 28.04 -51.86 -1.45 -2.01 16 23 H 0.03 0.68 8.14 -51.93 -0.42 0.25 16 24 H 0.09 2.53 6.07 -51.93 -0.32 2.22 16 25 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 26 H 0.26 7.08 8.31 -40.82 -0.34 6.74 16 27 H 0.39 7.63 8.52 -40.82 -0.35 7.29 16 28 H 0.15 1.09 8.06 -52.49 -0.42 0.66 16 29 H 0.14 0.68 8.06 -52.48 -0.42 0.26 16 30 H 0.14 1.08 8.06 -52.49 -0.42 0.66 16 LS Contribution 288.47 15.07 4.35 4.35 Total: -1.00 -31.59 288.47 -6.97 -38.56 By element: Atomic # 1 Polarization: 5.14 SS G_CDS: -2.71 Total: 2.43 kcal Atomic # 6 Polarization: -1.06 SS G_CDS: -2.61 Total: -3.66 kcal Atomic # 7 Polarization: -40.30 SS G_CDS: 0.34 Total: -39.95 kcal Atomic # 8 Polarization: -13.61 SS G_CDS: 0.09 Total: -13.52 kcal Atomic # 9 Polarization: -2.01 SS G_CDS: 0.04 Total: -1.97 kcal Atomic # 14 Polarization: 20.81 SS G_CDS: -5.02 Total: 15.79 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.45 Total: -2.01 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -31.59 -6.97 -38.56 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000050391273.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.189 kcal (2) G-P(sol) polarization free energy of solvation -31.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.560 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds