Wall clock time and date at job start Mon Mar 30 2020 01:05:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46907 * 109.46921 * 2 1 4 4 C 1.46900 * 110.99450 * 75.18048 * 3 2 1 5 5 C 1.50707 * 109.46760 * 195.89764 * 4 3 2 6 6 H 1.07997 * 119.99719 * 0.25627 * 5 4 3 7 7 C 1.37881 * 119.99726 * 180.25625 * 5 4 3 8 8 N 1.31514 * 119.99502 * 180.02562 * 7 5 4 9 9 Si 1.86797 * 119.99960 * 359.97438 * 7 5 4 10 10 H 1.48501 * 109.47064 * 90.00074 * 9 7 5 11 11 H 1.48503 * 109.46742 * 209.99936 * 9 7 5 12 12 H 1.48501 * 109.47235 * 329.99942 * 9 7 5 13 13 C 1.38187 * 110.99775 * 199.12987 * 3 2 1 14 14 S 1.72013 * 127.34961 * 235.72874 * 13 3 2 15 15 N 1.69445 * 96.11856 * 179.97438 * 14 13 3 16 16 C 1.29511 * 108.06943 * 0.31268 * 15 14 13 17 17 Cl 1.73599 * 121.51132 * 179.79445 * 16 15 14 18 18 C 1.39012 * 127.34862 * 56.05423 * 13 3 2 19 19 C 1.43202 * 123.23084 * 359.93860 * 18 13 3 20 20 N 3.53766 * 104.84069 * 266.76234 * 2 1 3 21 21 H 1.09002 * 109.46602 * 298.64924 * 1 2 3 22 22 H 1.08994 * 109.47451 * 58.65234 * 1 2 3 23 23 H 1.09001 * 109.46624 * 178.65621 * 1 2 3 24 24 H 1.09001 * 109.46887 * 240.00784 * 2 1 3 25 25 H 1.08995 * 109.47777 * 120.00454 * 2 1 3 26 26 H 1.08999 * 109.47127 * 315.89437 * 4 3 2 27 27 H 1.08999 * 109.47043 * 75.90048 * 4 3 2 28 28 H 0.97000 * 119.99768 * 180.02562 * 8 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0197 1.3851 0.0000 4 6 1.8644 1.9982 1.3259 5 6 1.9998 3.4944 1.2063 6 1 2.1788 3.9450 0.2413 7 6 1.8952 4.2879 2.3290 8 7 2.0129 5.5936 2.2246 9 14 1.5849 3.5085 3.9980 10 1 2.8832 3.1929 4.6460 11 1 0.8224 4.4545 4.8519 12 1 0.8023 2.2587 3.8229 13 6 3.3339 1.4457 -0.4228 14 16 4.6693 2.1327 0.4160 15 7 5.8271 1.7836 -0.7710 16 6 5.2292 1.1850 -1.7516 17 17 6.0959 0.6728 -3.1658 18 6 3.8576 0.9700 -1.6194 19 6 3.0649 0.3214 -2.6202 20 7 2.4362 -0.1931 -3.4142 21 1 -0.3632 0.4927 0.9019 22 1 -0.3634 0.5346 -0.8776 23 1 -0.3632 -1.0274 -0.0241 24 1 1.8933 -0.5137 -0.8901 25 1 1.8935 -0.5139 0.8899 26 1 0.8807 1.7533 1.7264 27 1 2.6349 1.6160 1.9954 28 1 1.9397 6.1519 3.0144 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000092664937.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:05:34 Heat of formation + Delta-G solvation = 67.874633 kcal Electronic energy + Delta-G solvation = -16175.438142 eV Core-core repulsion = 13379.477179 eV Total energy + Delta-G solvation = -2795.960963 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 271.024 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.53115 -37.71601 -36.28603 -35.86661 -32.98507 -31.49061 -30.17393 -27.76303 -24.63415 -23.06581 -21.64353 -21.12473 -18.52385 -17.41107 -17.11063 -15.66647 -15.23205 -15.00330 -14.66789 -14.09786 -14.07749 -13.06303 -12.95809 -12.82063 -12.68626 -12.54583 -12.19637 -11.94969 -11.57960 -11.45061 -11.27397 -11.01901 -10.86059 -10.56864 -10.33988 -10.21092 -10.02657 -9.73906 -8.91182 -8.38801 -7.89213 -6.37648 -4.41630 0.77373 1.11385 1.53344 1.84139 2.63582 3.01616 3.06386 3.11747 3.16608 3.59878 3.87946 4.11438 4.30982 4.90474 5.00757 5.10636 5.20121 5.30209 5.49646 5.77927 5.92858 6.14176 6.16947 6.29433 6.39216 6.85790 7.05609 7.24378 7.78513 8.15143 8.67956 9.17445 10.73730 Molecular weight = 271.02amu Principal moments of inertia in cm(-1) A = 0.022002 B = 0.007262 C = 0.005939 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1272.285540 B = 3854.767915 C = 4713.071824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.048 3.952 3 N -0.421 5.421 4 C 0.141 3.859 5 C -0.537 4.537 6 H 0.088 0.912 7 C 0.087 3.913 8 N -0.876 5.876 9 Si 0.864 3.136 10 H -0.269 1.269 11 H -0.279 1.279 12 H -0.265 1.265 13 C 0.109 3.891 14 S 0.410 5.590 15 N -0.510 5.510 16 C 0.226 3.774 17 Cl -0.012 7.012 18 C -0.202 4.202 19 C 0.302 3.698 20 N -0.432 5.432 21 H 0.066 0.934 22 H 0.066 0.934 23 H 0.063 0.937 24 H 0.078 0.922 25 H 0.058 0.942 26 H 0.059 0.941 27 H 0.015 0.985 28 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.214 -10.076 -1.369 10.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.078 4.078 3 N -0.133 5.133 4 C 0.016 3.984 5 C -0.576 4.576 6 H 0.106 0.894 7 C -0.119 4.119 8 N -0.512 5.512 9 Si 0.690 3.310 10 H -0.194 1.194 11 H -0.205 1.205 12 H -0.189 1.189 13 C -0.128 4.128 14 S 0.560 5.440 15 N -0.333 5.333 16 C 0.021 3.979 17 Cl 0.015 6.985 18 C -0.226 4.226 19 C -0.014 4.014 20 N -0.109 5.109 21 H 0.085 0.915 22 H 0.085 0.915 23 H 0.082 0.918 24 H 0.096 0.904 25 H 0.077 0.923 26 H 0.077 0.923 27 H 0.032 0.968 28 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 3.311 -9.492 -1.452 10.157 hybrid contribution -0.564 -1.054 0.139 1.203 sum 2.747 -10.546 -1.313 10.976 Atomic orbital electron populations 1.21805 0.93378 1.01777 1.03642 1.22461 0.97664 0.85524 1.02177 1.57865 1.09219 1.16564 1.29631 1.20911 0.98690 0.97478 0.81283 1.20854 1.52196 0.87316 0.97223 0.89387 1.24784 0.93867 0.94631 0.98638 1.69855 1.47256 1.03664 1.30381 0.87025 0.79431 0.79913 0.84607 1.19374 1.20471 1.18936 1.24916 0.95223 0.96168 0.96539 1.85171 0.87351 1.53518 1.18003 1.75886 1.27259 1.23232 1.06935 1.21225 0.88235 0.97421 0.91004 1.98400 1.76663 1.88402 1.35013 1.15451 0.91242 1.20664 0.95277 1.24208 0.92816 0.92293 0.92116 1.81180 1.08469 1.11704 1.09587 0.91537 0.91466 0.91816 0.90409 0.92326 0.92293 0.96782 0.91919 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.98 10.00 37.16 0.37 -1.61 15 2 C 0.05 0.71 5.48 -3.82 -0.02 0.69 15 3 N -0.42 -7.64 4.41 -173.80 -0.77 -8.41 15 4 C 0.14 2.79 3.25 -4.97 -0.02 2.77 15 5 C -0.54 -12.93 8.26 -34.44 -0.28 -13.21 15 6 H 0.09 2.40 8.04 -52.49 -0.42 1.98 15 7 C 0.09 2.17 5.47 -17.82 -0.10 2.07 15 8 N -0.88 -23.81 13.96 55.43 0.77 -23.03 15 9 Si 0.86 18.24 27.46 -169.99 -4.67 13.57 15 10 H -0.27 -5.52 7.11 56.52 0.40 -5.12 15 11 H -0.28 -6.00 7.11 56.52 0.40 -5.60 15 12 H -0.26 -5.22 6.55 56.52 0.37 -4.85 15 13 C 0.11 1.95 5.67 -14.40 -0.08 1.87 15 14 S 0.41 7.23 20.85 -107.50 -2.24 4.99 15 15 N -0.51 -8.84 12.00 31.91 0.38 -8.45 15 16 C 0.23 3.75 7.27 -18.08 -0.13 3.62 15 17 Cl -0.01 -0.18 28.56 -51.86 -1.48 -1.66 15 18 C -0.20 -3.45 5.61 -107.23 -0.60 -4.05 15 19 C 0.30 5.18 12.49 -22.47 -0.28 4.90 15 20 N -0.43 -7.69 18.54 41.84 0.78 -6.91 15 21 H 0.07 0.91 6.76 -51.93 -0.35 0.56 15 22 H 0.07 0.97 8.14 -51.93 -0.42 0.54 15 23 H 0.06 0.69 8.14 -51.93 -0.42 0.27 15 24 H 0.08 1.14 5.41 -51.93 -0.28 0.86 15 25 H 0.06 0.76 8.01 -51.93 -0.42 0.34 15 26 H 0.06 1.14 5.59 -51.93 -0.29 0.85 15 27 H 0.01 0.27 6.66 -51.93 -0.35 -0.07 15 28 H 0.27 6.89 8.31 -40.82 -0.34 6.55 15 LS Contribution 275.10 15.07 4.15 4.15 Total: -1.00 -26.06 275.10 -6.34 -32.40 By element: Atomic # 1 Polarization: -1.57 SS G_CDS: -2.12 Total: -3.69 kcal Atomic # 6 Polarization: -1.81 SS G_CDS: -1.14 Total: -2.95 kcal Atomic # 7 Polarization: -47.97 SS G_CDS: 1.17 Total: -46.80 kcal Atomic # 14 Polarization: 18.24 SS G_CDS: -4.67 Total: 13.57 kcal Atomic # 16 Polarization: 7.23 SS G_CDS: -2.24 Total: 4.99 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -1.48 Total: -1.66 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -26.06 -6.34 -32.40 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000092664937.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.274 kcal (2) G-P(sol) polarization free energy of solvation -26.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.399 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds