Wall clock time and date at job start Mon Mar 30 2020 01:31:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86800 * 120.00235 * 2 1 4 4 H 1.48498 * 109.46996 * 179.97438 * 3 2 1 5 5 H 1.48497 * 109.46605 * 299.99438 * 3 2 1 6 6 H 1.48496 * 109.46902 * 59.99052 * 3 2 1 7 7 C 1.37884 * 119.99981 * 179.97438 * 2 1 3 8 8 H 1.07999 * 120.00052 * 180.02562 * 7 2 1 9 9 C 1.50696 * 119.99746 * 0.02562 * 7 2 1 10 10 C 1.53002 * 109.46923 * 180.02562 * 9 7 2 11 11 N 1.46506 * 109.47433 * 180.02562 * 10 9 7 12 12 C 1.34777 * 120.00271 * 180.02562 * 11 10 9 13 13 O 1.21557 * 119.99487 * 0.26790 * 12 11 10 14 14 C 1.47776 * 119.99773 * 179.97438 * 12 11 10 15 15 C 1.39633 * 120.14366 * 359.72079 * 14 12 11 16 16 C 1.37897 * 119.90971 * 179.77094 * 15 14 12 17 17 C 1.38392 * 120.21105 * 0.52887 * 16 15 14 18 18 C 1.38470 * 120.29127 * 359.70116 * 17 16 15 19 19 F 1.35102 * 119.95892 * 180.02562 * 18 17 16 20 20 C 1.38379 * 120.07734 * 0.04219 * 18 17 16 21 21 Cl 1.73602 * 120.09832 * 179.97438 * 20 18 17 22 22 H 0.96991 * 120.00232 * 0.02562 * 1 2 3 23 23 H 1.08992 * 109.47473 * 60.00239 * 9 7 2 24 24 H 1.08999 * 109.47742 * 299.99398 * 9 7 2 25 25 H 1.08996 * 109.47407 * 59.99619 * 10 9 7 26 26 H 1.09000 * 109.46986 * 299.99847 * 10 9 7 27 27 H 0.96999 * 119.99685 * 359.97438 * 11 10 9 28 28 H 1.08002 * 120.04417 * 359.97438 * 15 14 12 29 29 H 1.08007 * 119.89454 * 180.25230 * 16 15 14 30 30 H 1.08005 * 119.85563 * 179.72242 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 3.7092 1.3463 0.0006 5 1 1.8905 2.3962 -1.2126 6 1 1.8903 2.3965 1.2124 7 6 2.0046 -1.1941 0.0005 8 1 3.0845 -1.1941 0.0010 9 6 1.2510 -2.4991 0.0005 10 6 2.2453 -3.6621 0.0018 11 7 1.5128 -4.9309 0.0012 12 6 2.1867 -6.0981 0.0027 13 8 3.4022 -6.0980 0.0094 14 6 1.4477 -7.3778 0.0026 15 6 0.0514 -7.3813 0.0069 16 6 -0.6333 -8.5783 0.0021 17 6 0.0591 -9.7765 0.0040 18 6 1.4438 -9.7831 0.0045 19 9 2.1129 -10.9568 0.0059 20 6 2.1430 -8.5890 0.0040 21 17 3.8790 -8.5966 0.0054 22 1 -0.4850 0.8399 -0.0004 23 1 0.6248 -2.5571 -0.8896 24 1 0.6241 -2.5568 0.8903 25 1 2.8713 -3.6040 0.8922 26 1 2.8726 -3.6048 -0.8877 27 1 0.5428 -4.9309 0.0005 28 1 -0.4916 -6.4477 0.0108 29 1 -1.7133 -8.5806 0.0013 30 1 -0.4830 -10.7107 0.0047 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000165231344.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:31:01 Heat of formation + Delta-G solvation = -64.186415 kcal Electronic energy + Delta-G solvation = -17487.563032 eV Core-core repulsion = 14223.202640 eV Total energy + Delta-G solvation = -3264.360393 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -49.22037 -40.12668 -38.21445 -36.52249 -34.96336 -32.97381 -31.61375 -30.79632 -29.40804 -25.35549 -23.85331 -22.95072 -21.14691 -20.48641 -18.44305 -16.94738 -16.73360 -16.39488 -16.11542 -16.06599 -15.04906 -14.99508 -14.60126 -14.48527 -13.61977 -13.45421 -13.42462 -12.63081 -12.52629 -12.31278 -11.95982 -11.66832 -11.28391 -11.10687 -11.07956 -10.64483 -10.39294 -9.74958 -9.45855 -9.33982 -9.19372 -8.98282 -8.59753 -8.40337 -6.12976 -4.15674 0.37547 0.66071 1.95564 2.70322 3.26638 3.29619 3.35011 3.40740 3.56130 3.88060 4.33442 4.40013 4.45241 4.64566 4.84197 5.12850 5.24574 5.43175 5.53293 5.66407 5.85080 6.24323 6.29549 6.30567 6.67657 6.79285 7.46341 7.56166 7.84440 7.87331 8.22902 8.49332 8.90401 9.49555 10.98699 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.037474 B = 0.003713 C = 0.003387 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 746.996454 B = 7538.279977 C = 8264.829129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.894 5.894 2 C 0.059 3.941 3 Si 0.896 3.104 4 H -0.271 1.271 5 H -0.283 1.283 6 H -0.283 1.283 7 C -0.521 4.521 8 H 0.060 0.940 9 C 0.012 3.988 10 C 0.122 3.878 11 N -0.713 5.713 12 C 0.542 3.458 13 O -0.519 6.519 14 C -0.094 4.094 15 C -0.086 4.086 16 C -0.094 4.094 17 C -0.124 4.124 18 C 0.097 3.903 19 F -0.126 7.126 20 C -0.030 4.030 21 Cl -0.011 7.011 22 H 0.262 0.738 23 H 0.023 0.977 24 H 0.023 0.977 25 H 0.060 0.940 26 H 0.059 0.941 27 H 0.396 0.604 28 H 0.146 0.854 29 H 0.146 0.854 30 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.139 -19.553 -0.002 19.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.533 5.533 2 C -0.142 4.142 3 Si 0.724 3.276 4 H -0.196 1.196 5 H -0.209 1.209 6 H -0.209 1.209 7 C -0.560 4.560 8 H 0.079 0.921 9 C -0.026 4.026 10 C 0.000 4.000 11 N -0.363 5.363 12 C 0.326 3.674 13 O -0.396 6.396 14 C -0.098 4.098 15 C -0.105 4.105 16 C -0.112 4.112 17 C -0.144 4.144 18 C 0.077 3.923 19 F -0.104 7.104 20 C -0.059 4.059 21 Cl 0.019 6.981 22 H 0.071 0.929 23 H 0.041 0.959 24 H 0.041 0.959 25 H 0.078 0.922 26 H 0.078 0.922 27 H 0.231 0.769 28 H 0.163 0.837 29 H 0.164 0.836 30 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -2.193 -19.430 0.003 19.554 hybrid contribution 0.080 0.701 -0.003 0.706 sum -2.113 -18.729 0.000 18.848 Atomic orbital electron populations 1.69954 1.06095 1.26819 1.50435 1.24991 0.94891 0.99434 0.94930 0.86456 0.80200 0.83298 0.77633 1.19555 1.20918 1.20922 1.21079 0.93320 0.90304 1.51296 0.92137 1.19340 0.94217 0.91115 0.97895 1.21796 0.96093 0.80934 1.01143 1.46265 1.10504 1.06321 1.73256 1.17969 0.87486 0.83425 0.78506 1.90859 1.12693 1.87144 1.48903 1.19922 0.93772 0.93107 1.02984 1.21496 0.92159 0.99684 0.97183 1.21075 1.00990 0.90881 0.98283 1.21304 0.91262 1.00578 1.01220 1.17303 0.90124 0.80174 1.04736 1.91550 1.80511 1.44548 1.93828 1.21097 0.88046 0.92666 1.04110 1.98437 1.05108 1.98630 1.95971 0.92875 0.95871 0.95879 0.92198 0.92216 0.76907 0.83667 0.83620 0.83499 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.89 -25.60 13.29 55.43 0.74 -24.87 16 2 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 3 Si 0.90 21.08 29.54 -169.99 -5.02 16.06 16 4 H -0.27 -6.29 7.11 56.52 0.40 -5.89 16 5 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 6 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 7 C -0.52 -14.17 9.11 -34.44 -0.31 -14.48 16 8 H 0.06 1.62 7.74 -52.49 -0.41 1.22 16 9 C 0.01 0.28 5.09 -27.88 -0.14 0.14 16 10 C 0.12 2.51 5.61 -4.04 -0.02 2.49 16 11 N -0.71 -11.94 5.51 -61.27 -0.34 -12.28 16 12 C 0.54 9.17 7.77 -12.36 -0.10 9.08 16 13 O -0.52 -10.44 13.97 5.32 0.07 -10.36 16 14 C -0.09 -1.26 5.88 -104.95 -0.62 -1.88 16 15 C -0.09 -0.85 9.54 -39.19 -0.37 -1.22 16 16 C -0.09 -0.71 10.03 -39.65 -0.40 -1.11 16 17 C -0.12 -1.03 10.02 -39.44 -0.40 -1.42 16 18 C 0.10 1.10 7.27 -39.44 -0.29 0.81 16 19 F -0.13 -1.48 16.83 2.25 0.04 -1.44 16 20 C -0.03 -0.41 6.36 -39.00 -0.25 -0.66 16 21 Cl -0.01 -0.17 25.68 -51.86 -1.33 -1.50 16 22 H 0.26 7.07 8.31 -40.82 -0.34 6.73 16 23 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.02 0.57 8.14 -51.93 -0.42 0.15 16 25 H 0.06 1.28 8.14 -51.93 -0.42 0.86 16 26 H 0.06 1.28 8.14 -51.93 -0.42 0.85 16 27 H 0.40 5.53 6.50 -40.82 -0.27 5.26 16 28 H 0.15 1.16 6.40 -52.49 -0.34 0.83 16 29 H 0.15 0.64 8.06 -52.48 -0.42 0.21 16 30 H 0.15 0.80 8.06 -52.48 -0.42 0.37 16 LS Contribution 285.89 15.07 4.31 4.31 Total: -1.00 -31.24 285.89 -7.20 -38.44 By element: Atomic # 1 Polarization: 1.04 SS G_CDS: -2.68 Total: -1.64 kcal Atomic # 6 Polarization: -3.73 SS G_CDS: -2.99 Total: -6.72 kcal Atomic # 7 Polarization: -37.54 SS G_CDS: 0.40 Total: -37.14 kcal Atomic # 8 Polarization: -10.44 SS G_CDS: 0.07 Total: -10.36 kcal Atomic # 9 Polarization: -1.48 SS G_CDS: 0.04 Total: -1.44 kcal Atomic # 14 Polarization: 21.08 SS G_CDS: -5.02 Total: 16.06 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.33 Total: -1.50 kcal Total LS contribution 4.31 Total: 4.31 kcal Total: -31.24 -7.20 -38.44 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000165231344.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.745 kcal (2) G-P(sol) polarization free energy of solvation -31.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.985 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds