Wall clock time and date at job start Mon Mar 30 2020 01:41:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38462 * 119.82943 * 2 1 4 4 C 1.37842 * 120.23722 * 179.97438 * 3 2 1 5 5 C 1.39735 * 119.89300 * 0.29189 * 4 3 2 6 6 C 1.47583 * 120.16492 * 179.70473 * 5 4 3 7 7 O 1.21606 * 120.00189 * 130.57542 * 6 5 4 8 8 N 1.34776 * 119.99801 * 310.57370 * 6 5 4 9 9 C 1.46508 * 120.00298 * 4.53922 * 8 6 5 10 10 C 1.36889 * 120.00083 * 184.54381 * 8 6 5 11 11 H 1.08005 * 120.00044 * 321.08169 * 10 8 6 12 12 C 1.39030 * 120.00530 * 141.08640 * 10 8 6 13 13 N 1.31376 * 120.00495 * 159.51380 * 12 10 8 14 14 Si 1.86802 * 119.99705 * 339.51229 * 12 10 8 15 15 H 1.48509 * 109.47165 * 94.98789 * 14 12 10 16 16 H 1.48497 * 109.47285 * 214.98454 * 14 12 10 17 17 H 1.48502 * 109.47307 * 334.98670 * 14 12 10 18 18 C 1.39861 * 119.66764 * 359.49829 * 5 4 3 19 19 F 1.35100 * 120.12007 * 180.25301 * 18 5 4 20 20 C 1.38315 * 119.83171 * 180.02562 * 2 1 3 21 21 Cl 1.73601 * 119.95251 * 0.02562 * 20 2 1 22 22 H 1.08999 * 109.47569 * 90.00434 * 1 2 3 23 23 H 1.09006 * 109.47017 * 210.00291 * 1 2 3 24 24 H 1.09000 * 109.47743 * 329.99905 * 1 2 3 25 25 H 1.08005 * 119.88530 * 359.97438 * 3 2 1 26 26 H 1.07998 * 120.05001 * 180.02562 * 4 3 2 27 27 H 1.08995 * 109.46495 * 85.98657 * 9 8 6 28 28 H 1.09000 * 109.47310 * 205.98610 * 9 8 6 29 29 H 1.08996 * 109.46706 * 325.99088 * 9 8 6 30 30 H 0.96995 * 120.00104 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1957 1.2012 0.0000 4 6 3.5741 1.2110 0.0005 5 6 4.2791 0.0045 -0.0051 6 6 5.7549 0.0081 -0.0111 7 8 6.3679 -0.6773 0.7847 8 7 6.4233 0.7709 -0.8987 9 6 5.6884 1.6714 -1.7906 10 6 7.7889 0.7042 -0.9670 11 1 8.3709 0.6108 -0.0620 12 6 8.4267 0.7568 -2.2013 13 7 9.6941 1.0951 -2.2719 14 14 7.4813 0.3464 -3.7593 15 1 6.9659 1.5982 -4.3698 16 1 8.3835 -0.3378 -4.7200 17 1 6.3429 -0.5473 -3.4267 18 6 3.5792 -1.2063 -0.0006 19 9 4.2516 -2.3781 -0.0008 20 6 2.1950 -1.1999 -0.0005 21 17 1.3214 -2.7000 -0.0019 22 1 -0.3634 -0.0001 -1.0276 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3634 0.8899 0.5138 25 1 1.6510 2.1338 -0.0004 26 1 4.1082 2.1496 0.0009 27 1 5.5155 2.6216 -1.2854 28 1 6.2714 1.8419 -2.6957 29 1 4.7317 1.2206 -2.0541 30 1 10.1390 1.1322 -3.1331 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000278921625.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:41:58 Heat of formation + Delta-G solvation = -44.947019 kcal Electronic energy + Delta-G solvation = -18627.804297 eV Core-core repulsion = 15364.278187 eV Total energy + Delta-G solvation = -3263.526110 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.64215 -39.74847 -38.18399 -36.48752 -34.93487 -32.93342 -31.98543 -30.46625 -27.82903 -26.58657 -24.90062 -22.76324 -22.19355 -19.70783 -17.36456 -17.04470 -16.70134 -16.57103 -15.74841 -15.53210 -14.93895 -14.45763 -14.23800 -13.90629 -13.71388 -13.43461 -12.74859 -12.65415 -12.48271 -12.31817 -12.20925 -12.03951 -11.77608 -11.44266 -11.37037 -10.90561 -10.86573 -10.43810 -10.02687 -9.25514 -8.80178 -8.69761 -8.56483 -7.85989 -6.51534 -4.08310 0.85379 1.02802 1.96002 2.95067 3.12878 3.21119 3.24800 3.75038 4.03273 4.08610 4.32214 4.61877 4.76610 4.84443 5.01231 5.14438 5.32127 5.40200 5.45596 5.70601 5.77386 5.88765 5.94554 5.99909 6.14874 6.19962 6.23468 6.66688 7.41330 8.14644 8.36663 8.81047 9.16178 9.59875 10.59384 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.027491 B = 0.006142 C = 0.005885 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1018.264176 B = 4557.853836 C = 4756.427980 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.050 4.050 3 C -0.126 4.126 4 C -0.066 4.066 5 C -0.130 4.130 6 C 0.497 3.503 7 O -0.548 6.548 8 N -0.454 5.454 9 C 0.058 3.942 10 C -0.316 4.316 11 H 0.110 0.890 12 C 0.062 3.938 13 N -0.855 5.855 14 Si 0.878 3.122 15 H -0.272 1.272 16 H -0.284 1.284 17 H -0.263 1.263 18 C 0.151 3.849 19 F -0.112 7.112 20 C -0.083 4.083 21 Cl -0.053 7.053 22 H 0.078 0.922 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.140 0.860 26 H 0.145 0.855 27 H 0.057 0.943 28 H 0.068 0.932 29 H 0.058 0.942 30 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.099 1.517 0.235 19.161 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.052 4.052 3 C -0.144 4.144 4 C -0.085 4.085 5 C -0.135 4.135 6 C 0.285 3.715 7 O -0.429 6.429 8 N -0.174 5.174 9 C -0.085 4.085 10 C -0.442 4.442 11 H 0.128 0.872 12 C -0.145 4.145 13 N -0.490 5.490 14 Si 0.705 3.295 15 H -0.199 1.199 16 H -0.210 1.210 17 H -0.187 1.187 18 C 0.130 3.870 19 F -0.090 7.090 20 C -0.111 4.111 21 Cl -0.024 7.024 22 H 0.097 0.903 23 H 0.093 0.907 24 H 0.093 0.907 25 H 0.158 0.842 26 H 0.163 0.837 27 H 0.075 0.925 28 H 0.086 0.914 29 H 0.076 0.924 30 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -18.601 1.027 0.510 18.637 hybrid contribution -0.256 -0.503 -1.017 1.163 sum -18.857 0.524 -0.507 18.871 Atomic orbital electron populations 1.20882 0.89703 1.03667 1.03129 1.19671 0.96846 0.90537 0.98102 1.20943 0.93728 0.97223 1.02512 1.21472 0.93944 0.97458 0.95594 1.20460 0.96619 0.92014 1.04373 1.17853 0.84706 0.82396 0.86564 1.90704 1.68383 1.43475 1.40322 1.43566 1.06893 1.33963 1.33014 1.22201 0.96545 0.94197 0.95544 1.19094 0.78387 1.51173 0.95591 0.87246 1.25411 0.95512 0.95195 0.98367 1.69710 1.10960 1.41598 1.26707 0.86939 0.80619 0.79063 0.82903 1.19923 1.21030 1.18711 1.17310 0.87535 0.81790 1.00409 1.91585 1.80072 1.44408 1.92905 1.20682 0.90107 0.88619 1.11668 1.98352 1.75609 1.31428 1.97038 0.90346 0.90706 0.90697 0.84212 0.83694 0.92470 0.91388 0.92359 0.91268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.99 9.60 36.00 0.35 -0.64 16 2 C -0.05 -0.60 5.89 -104.51 -0.62 -1.22 16 3 C -0.13 -1.43 9.67 -39.64 -0.38 -1.81 16 4 C -0.07 -0.95 7.77 -39.17 -0.30 -1.25 16 5 C -0.13 -2.50 4.88 -104.92 -0.51 -3.01 16 6 C 0.50 12.13 6.95 -12.45 -0.09 12.04 16 7 O -0.55 -15.63 16.52 5.27 0.09 -15.55 16 8 N -0.45 -11.09 2.55 -123.37 -0.31 -11.40 16 9 C 0.06 1.12 7.71 59.85 0.46 1.58 16 10 C -0.32 -8.92 9.37 -15.00 -0.14 -9.06 16 11 H 0.11 3.46 7.90 -52.48 -0.41 3.05 16 12 C 0.06 1.71 5.30 -17.45 -0.09 1.62 16 13 N -0.85 -24.30 13.95 55.50 0.77 -23.52 16 14 Si 0.88 20.41 25.00 -169.99 -4.25 16.16 16 15 H -0.27 -5.77 6.68 56.52 0.38 -5.40 16 16 H -0.28 -6.61 7.11 56.52 0.40 -6.20 16 17 H -0.26 -6.21 7.11 56.52 0.40 -5.81 16 18 C 0.15 2.83 7.23 -38.91 -0.28 2.55 16 19 F -0.11 -2.37 16.09 2.25 0.04 -2.33 16 20 C -0.08 -1.25 6.31 -39.49 -0.25 -1.49 16 21 Cl -0.05 -0.71 26.93 -51.86 -1.40 -2.11 16 22 H 0.08 0.58 8.14 -51.93 -0.42 0.16 16 23 H 0.07 0.64 6.88 -51.93 -0.36 0.28 16 24 H 0.07 0.48 8.08 -51.93 -0.42 0.06 16 25 H 0.14 1.08 8.06 -52.48 -0.42 0.65 16 26 H 0.15 1.86 6.38 -52.49 -0.33 1.53 16 27 H 0.06 0.91 7.15 -51.93 -0.37 0.54 16 28 H 0.07 1.38 3.51 -51.93 -0.18 1.19 16 29 H 0.06 0.98 6.21 -51.93 -0.32 0.66 16 30 H 0.28 7.24 8.31 -40.82 -0.34 6.90 16 LS Contribution 273.25 15.07 4.12 4.12 Total: -1.00 -32.51 273.25 -5.21 -37.72 By element: Atomic # 1 Polarization: 0.02 SS G_CDS: -2.41 Total: -2.39 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: -1.86 Total: -0.70 kcal Atomic # 7 Polarization: -35.38 SS G_CDS: 0.46 Total: -34.92 kcal Atomic # 8 Polarization: -15.63 SS G_CDS: 0.09 Total: -15.55 kcal Atomic # 9 Polarization: -2.37 SS G_CDS: 0.04 Total: -2.33 kcal Atomic # 14 Polarization: 20.41 SS G_CDS: -4.25 Total: 16.16 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.40 Total: -2.11 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -32.51 -5.21 -37.72 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000278921625.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.224 kcal (2) G-P(sol) polarization free energy of solvation -32.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.723 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds