Wall clock time and date at job start Mon Mar 30 2020 01:54:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46498 * 109.47095 * 2 1 4 4 C 1.36881 * 120.00142 * 280.74244 * 3 2 1 5 5 H 1.08003 * 119.99979 * 165.15159 * 4 3 2 6 6 C 1.39039 * 120.00032 * 345.14889 * 4 3 2 7 7 N 1.31371 * 119.99758 * 34.50191 * 6 4 3 8 8 Si 1.86803 * 120.00144 * 214.50524 * 6 4 3 9 9 H 1.48497 * 109.47028 * 0.02562 * 8 6 4 10 10 H 1.48505 * 109.47022 * 119.99997 * 8 6 4 11 11 H 1.48497 * 109.46853 * 240.00024 * 8 6 4 12 12 C 1.34784 * 119.99891 * 100.73569 * 3 2 1 13 13 O 1.21597 * 120.00076 * 186.98805 * 12 3 2 14 14 C 1.47655 * 119.99774 * 6.99074 * 12 3 2 15 15 C 1.39674 * 120.15237 * 322.94891 * 14 12 3 16 16 C 1.38100 * 119.83334 * 179.97438 * 15 14 12 17 17 F 1.35105 * 119.92987 * 179.97438 * 16 15 14 18 18 C 1.38638 * 120.13565 * 0.02562 * 16 15 14 19 19 C 1.38257 * 120.30688 * 359.97438 * 18 16 15 20 20 C 1.38134 * 120.16555 * 0.02562 * 19 18 16 21 21 Cl 1.73598 * 120.07076 * 180.27255 * 20 19 18 22 22 H 1.08997 * 109.47208 * 190.57153 * 1 2 3 23 23 H 1.09000 * 109.47049 * 310.57578 * 1 2 3 24 24 H 1.08999 * 109.47037 * 70.57465 * 1 2 3 25 25 H 1.09004 * 109.47102 * 240.00441 * 2 1 3 26 26 H 1.08999 * 109.47009 * 119.99928 * 2 1 3 27 27 H 0.97003 * 119.99803 * 179.97438 * 7 6 4 28 28 H 1.07997 * 120.08044 * 359.95725 * 15 14 12 29 29 H 1.08003 * 119.84675 * 180.02562 * 18 16 15 30 30 H 1.08003 * 119.91853 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.0382 2.1001 -1.1646 5 1 2.1644 3.1724 -1.1353 6 6 1.8959 1.4501 -2.3854 7 7 1.1183 0.3955 -2.4813 8 14 2.8103 2.0762 -3.8892 9 1 3.6142 3.2685 -3.5188 10 1 3.7110 1.0115 -4.3997 11 1 1.8330 2.4458 -4.9444 12 6 2.4480 1.9441 1.1468 13 8 2.7331 3.1258 1.1746 14 6 2.5725 1.1257 2.3695 15 6 1.6370 0.1250 2.6422 16 6 1.7601 -0.6369 3.7874 17 9 0.8560 -1.6050 4.0534 18 6 2.8089 -0.4097 4.6652 19 6 3.7382 0.5793 4.4008 20 6 3.6271 1.3488 3.2591 21 17 4.7993 2.5852 2.9260 22 1 -0.3633 -1.0102 0.1885 23 1 -0.3633 0.6684 0.7806 24 1 -0.3633 0.3418 -0.9692 25 1 1.8934 -0.5138 -0.8901 26 1 1.8933 -0.5138 0.8900 27 1 1.0188 -0.0578 -3.3331 28 1 0.8193 -0.0522 1.9594 29 1 2.9009 -1.0086 5.5592 30 1 4.5525 0.7512 5.0892 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292479453.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:54:10 Heat of formation + Delta-G solvation = -23.655705 kcal Electronic energy + Delta-G solvation = -18832.132369 eV Core-core repulsion = 15569.529520 eV Total energy + Delta-G solvation = -3262.602849 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.75430 -39.68428 -37.59143 -35.95142 -35.19313 -32.46401 -30.86073 -29.99088 -29.46149 -25.53792 -23.42071 -22.43501 -22.14180 -19.76780 -17.33818 -16.84047 -16.66964 -16.30972 -15.63887 -15.38482 -14.68213 -14.27722 -14.14181 -13.87459 -13.26592 -12.88840 -12.79750 -12.57286 -12.13642 -11.87906 -11.41771 -11.27340 -11.02990 -10.89816 -10.86315 -10.51716 -10.39253 -10.28006 -10.01062 -8.84049 -8.77373 -8.39171 -8.29198 -7.99437 -6.65096 -3.83507 1.03141 1.22386 2.55434 3.04104 3.20190 3.28042 3.39638 3.96640 4.09378 4.35700 4.58695 4.81751 4.93682 5.02215 5.36876 5.39376 5.80991 5.87625 6.04368 6.14666 6.18065 6.35042 6.41958 6.49008 6.62782 6.87483 7.14897 7.33096 7.60992 7.97230 8.35048 9.02877 9.24511 9.86851 10.34461 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.020222 B = 0.007622 C = 0.005827 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1384.297087 B = 3672.739436 C = 4803.763228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.088 3.912 3 N -0.418 5.418 4 C -0.309 4.309 5 H 0.111 0.889 6 C 0.044 3.956 7 N -0.837 5.837 8 Si 0.909 3.091 9 H -0.264 1.264 10 H -0.278 1.278 11 H -0.281 1.281 12 C 0.460 3.540 13 O -0.570 6.570 14 C -0.056 4.056 15 C -0.143 4.143 16 C 0.091 3.909 17 F -0.139 7.139 18 C -0.149 4.149 19 C -0.093 4.093 20 C -0.017 4.017 21 Cl -0.042 7.042 22 H 0.040 0.960 23 H 0.031 0.969 24 H 0.101 0.899 25 H 0.103 0.897 26 H 0.055 0.945 27 H 0.272 0.728 28 H 0.167 0.833 29 H 0.139 0.861 30 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.131 -5.082 8.996 10.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.035 4.035 3 N -0.134 5.134 4 C -0.435 4.435 5 H 0.129 0.871 6 C -0.162 4.162 7 N -0.473 5.473 8 Si 0.734 3.266 9 H -0.188 1.188 10 H -0.203 1.203 11 H -0.207 1.207 12 C 0.249 3.751 13 O -0.456 6.456 14 C -0.061 4.061 15 C -0.163 4.163 16 C 0.072 3.928 17 F -0.118 7.118 18 C -0.168 4.168 19 C -0.112 4.112 20 C -0.045 4.045 21 Cl -0.013 7.013 22 H 0.059 0.941 23 H 0.050 0.950 24 H 0.120 0.880 25 H 0.120 0.880 26 H 0.073 0.927 27 H 0.082 0.918 28 H 0.184 0.816 29 H 0.157 0.843 30 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.248 -4.561 8.770 10.138 hybrid contribution 0.187 -0.126 -0.696 0.732 sum 2.435 -4.688 8.074 9.649 Atomic orbital electron populations 1.22181 0.96152 0.98976 1.04026 1.22285 0.94941 0.84133 1.02157 1.43765 1.50795 1.11759 1.07094 1.19709 1.48200 0.93977 0.81648 0.87086 1.25334 0.95450 0.96010 0.99430 1.70160 1.29133 1.21337 1.26719 0.86174 0.80345 0.79599 0.80522 1.18777 1.20311 1.20736 1.17371 0.87353 0.87682 0.82693 1.90666 1.56275 1.14696 1.83948 1.20082 0.93617 0.95689 0.96667 1.22113 1.01905 0.95481 0.96800 1.17608 0.89653 0.89774 0.95795 1.91491 1.65744 1.60696 1.93853 1.21012 0.94971 1.00371 1.00469 1.20754 0.99608 0.94839 0.95967 1.20936 0.93324 0.94243 0.96027 1.98382 1.55706 1.52086 1.95121 0.94062 0.95000 0.88034 0.87956 0.92704 0.91770 0.81627 0.84300 0.84157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.14 8.51 37.16 0.32 -2.83 16 2 C 0.09 1.90 4.88 -4.04 -0.02 1.88 16 3 N -0.42 -10.39 2.65 -115.95 -0.31 -10.69 16 4 C -0.31 -8.20 9.22 -15.00 -0.14 -8.34 16 5 H 0.11 3.15 7.42 -52.48 -0.39 2.76 16 6 C 0.04 1.09 5.08 -17.45 -0.09 1.00 16 7 N -0.84 -20.01 8.36 55.50 0.46 -19.54 16 8 Si 0.91 19.51 29.67 -169.99 -5.04 14.47 16 9 H -0.26 -5.85 7.11 56.52 0.40 -5.45 16 10 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 11 H -0.28 -5.96 7.11 56.52 0.40 -5.55 16 12 C 0.46 11.29 7.04 -12.41 -0.09 11.20 16 13 O -0.57 -15.61 14.78 5.28 0.08 -15.53 16 14 C -0.06 -1.13 5.42 -104.95 -0.57 -1.70 16 15 C -0.14 -2.56 7.34 -39.10 -0.29 -2.85 16 16 C 0.09 1.40 7.29 -39.48 -0.29 1.12 16 17 F -0.14 -2.08 17.26 2.25 0.04 -2.04 16 18 C -0.15 -1.96 10.02 -39.43 -0.39 -2.36 16 19 C -0.09 -1.30 9.81 -39.61 -0.39 -1.69 16 20 C -0.02 -0.30 6.33 -39.05 -0.25 -0.55 16 21 Cl -0.04 -0.79 26.73 -51.86 -1.39 -2.17 16 22 H 0.04 0.71 8.14 -51.93 -0.42 0.29 16 23 H 0.03 0.63 7.24 -51.93 -0.38 0.25 16 24 H 0.10 2.30 6.12 -51.93 -0.32 1.98 16 25 H 0.10 2.37 5.85 -51.93 -0.30 2.07 16 26 H 0.06 1.08 4.25 -51.93 -0.22 0.86 16 27 H 0.27 6.10 8.31 -40.82 -0.34 5.76 16 28 H 0.17 3.00 3.46 -52.49 -0.18 2.82 16 29 H 0.14 1.38 8.06 -52.48 -0.42 0.96 16 30 H 0.14 1.53 8.06 -52.48 -0.42 1.10 16 LS Contribution 268.62 15.07 4.05 4.05 Total: -1.00 -27.74 268.62 -6.49 -34.23 By element: Atomic # 1 Polarization: 4.53 SS G_CDS: -2.19 Total: 2.34 kcal Atomic # 6 Polarization: -2.91 SS G_CDS: -2.19 Total: -5.11 kcal Atomic # 7 Polarization: -30.39 SS G_CDS: 0.16 Total: -30.24 kcal Atomic # 8 Polarization: -15.61 SS G_CDS: 0.08 Total: -15.53 kcal Atomic # 9 Polarization: -2.08 SS G_CDS: 0.04 Total: -2.04 kcal Atomic # 14 Polarization: 19.51 SS G_CDS: -5.04 Total: 14.47 kcal Atomic # 17 Polarization: -0.79 SS G_CDS: -1.39 Total: -2.17 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -27.74 -6.49 -34.23 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292479453.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.575 kcal (2) G-P(sol) polarization free energy of solvation -27.739 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds