Wall clock time and date at job start Mon Mar 30 2020 01:11:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53003 * 109.47578 * 2 1 4 4 N 1.46495 * 109.47260 * 183.07474 * 3 2 1 5 5 C 1.36934 * 120.00044 * 291.23456 * 4 3 2 6 6 H 1.08002 * 119.99978 * 355.92589 * 5 4 3 7 7 C 1.38815 * 120.00359 * 175.93108 * 5 4 3 8 8 N 1.31618 * 119.99995 * 39.85643 * 7 5 4 9 9 Si 1.86797 * 120.00097 * 219.86123 * 7 5 4 10 10 H 1.48506 * 109.47205 * 359.97438 * 9 7 5 11 11 H 1.48502 * 109.47202 * 119.99485 * 9 7 5 12 12 H 1.48490 * 109.47223 * 239.99589 * 9 7 5 13 13 C 1.46499 * 120.00071 * 111.51270 * 4 3 2 14 14 C 1.50697 * 109.47055 * 263.35290 * 13 4 3 15 15 C 1.38240 * 119.98398 * 263.29683 * 14 13 4 16 16 C 1.38187 * 120.04129 * 179.72565 * 15 14 13 17 17 C 1.38486 * 119.99861 * 0.54876 * 16 15 14 18 18 F 1.35099 * 120.02175 * 179.75127 * 17 16 15 19 19 C 1.38414 * 119.96218 * 359.72302 * 17 16 15 20 20 C 1.38333 * 119.96397 * 0.02562 * 19 17 16 21 21 Cl 1.73599 * 120.00519 * 179.97438 * 20 19 17 22 22 H 1.09001 * 109.47589 * 179.97438 * 1 2 3 23 23 H 1.08995 * 109.47314 * 300.00097 * 1 2 3 24 24 H 1.09001 * 109.47194 * 60.00154 * 1 2 3 25 25 H 1.09009 * 109.47189 * 239.99852 * 2 1 3 26 26 H 1.09004 * 109.47168 * 120.00373 * 2 1 3 27 27 H 1.08995 * 109.46484 * 63.07226 * 3 2 1 28 28 H 1.08995 * 109.46852 * 303.07530 * 3 2 1 29 29 H 0.96995 * 120.00290 * 183.49075 * 8 7 5 30 30 H 1.08998 * 109.47131 * 23.35298 * 13 4 3 31 31 H 1.08998 * 109.47342 * 143.35082 * 13 4 3 32 32 H 1.08006 * 119.97856 * 0.02562 * 15 14 13 33 33 H 1.08003 * 120.00289 * 180.27404 * 16 15 14 34 34 H 1.08001 * 120.02441 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 3.5031 1.4431 -0.0741 5 6 4.2426 0.9941 0.9874 6 1 3.7505 0.7016 1.9031 7 6 5.6248 0.9151 0.8865 8 7 6.2949 1.8644 0.2682 9 14 6.5339 -0.5384 1.6282 10 1 5.5585 -1.4604 2.2637 11 1 7.2721 -1.2582 0.5595 12 1 7.4938 -0.0521 2.6514 13 6 4.1753 1.9296 -1.2814 14 6 4.5250 0.7615 -2.1670 15 6 5.7938 0.2147 -2.1203 16 6 6.1140 -0.8600 -2.9278 17 6 5.1671 -1.3827 -3.7926 18 9 5.4812 -2.4302 -4.5858 19 6 3.8984 -0.8317 -3.8434 20 6 3.5779 0.2408 -3.0307 21 17 1.9872 0.9332 -3.0941 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 1.8933 -0.5139 -0.8900 26 1 1.8933 -0.5139 0.8900 27 1 1.7224 1.9401 0.9162 28 1 1.6324 1.9719 -0.8611 29 1 7.2547 1.7845 0.1533 30 1 3.5116 2.6070 -1.8188 31 1 5.0861 2.4592 -1.0019 32 1 6.5338 0.6247 -1.4489 33 1 7.1042 -1.2895 -2.8876 34 1 3.1590 -1.2388 -4.5172 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044373605.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:11:36 Heat of formation + Delta-G solvation = -4.708579 kcal Electronic energy + Delta-G solvation = -19414.035417 eV Core-core repulsion = 16288.087271 eV Total energy + Delta-G solvation = -3125.948145 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -48.54733 -38.79803 -36.11776 -35.95309 -33.19250 -31.21752 -30.43187 -29.91355 -25.68821 -25.57244 -22.55010 -22.36677 -20.75074 -20.07878 -17.40668 -16.95000 -16.08362 -15.26869 -15.12336 -14.83797 -14.47335 -14.12816 -13.87000 -13.26370 -13.15706 -13.03756 -12.78384 -12.45661 -11.73463 -11.71377 -11.33436 -11.20832 -10.95906 -10.75549 -10.73158 -10.47052 -10.35822 -10.25567 -9.94743 -9.82009 -9.71126 -8.59429 -8.41074 -7.87417 -7.04475 -5.92588 -3.17410 1.56706 1.68340 2.56211 3.33419 3.46344 3.51378 4.03915 4.46960 4.71578 5.04679 5.20565 5.37720 5.47949 5.60297 5.69571 5.76784 5.84473 6.08153 6.18337 6.23052 6.34303 6.46337 6.48781 6.55238 6.62420 6.69142 6.85203 6.96188 7.12920 7.21098 7.36570 7.64188 7.73064 8.25731 9.04321 9.74830 10.17643 11.00538 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.012898 B = 0.011568 C = 0.007414 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2170.393339 B = 2419.833333 C = 3775.478343 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.140 4.140 3 C 0.150 3.850 4 N -0.581 5.581 5 C -0.237 4.237 6 H 0.080 0.920 7 C 0.003 3.997 8 N -0.874 5.874 9 Si 0.857 3.143 10 H -0.279 1.279 11 H -0.284 1.284 12 H -0.294 1.294 13 C 0.149 3.851 14 C -0.059 4.059 15 C -0.061 4.061 16 C -0.160 4.160 17 C 0.083 3.917 18 F -0.147 7.147 19 C -0.160 4.160 20 C -0.011 4.011 21 Cl -0.070 7.070 22 H 0.043 0.957 23 H 0.047 0.953 24 H 0.045 0.955 25 H 0.058 0.942 26 H 0.057 0.943 27 H 0.030 0.970 28 H 0.051 0.949 29 H 0.254 0.746 30 H 0.036 0.964 31 H 0.141 0.859 32 H 0.158 0.842 33 H 0.128 0.872 34 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.970 -2.058 -6.647 8.551 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.179 4.179 3 C 0.024 3.976 4 N -0.299 5.299 5 C -0.365 4.365 6 H 0.098 0.902 7 C -0.193 4.193 8 N -0.520 5.520 9 Si 0.686 3.314 10 H -0.204 1.204 11 H -0.211 1.211 12 H -0.221 1.221 13 C 0.023 3.977 14 C -0.063 4.063 15 C -0.080 4.080 16 C -0.179 4.179 17 C 0.063 3.937 18 F -0.126 7.126 19 C -0.179 4.179 20 C -0.038 4.038 21 Cl -0.041 7.041 22 H 0.062 0.938 23 H 0.066 0.934 24 H 0.064 0.936 25 H 0.077 0.923 26 H 0.075 0.925 27 H 0.048 0.952 28 H 0.069 0.931 29 H 0.066 0.934 30 H 0.054 0.946 31 H 0.158 0.842 32 H 0.175 0.825 33 H 0.146 0.854 34 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -4.973 -1.945 -6.606 8.494 hybrid contribution 0.401 -1.395 0.110 1.456 sum -4.572 -3.340 -6.495 8.617 Atomic orbital electron populations 1.21707 0.97474 1.00396 1.00717 1.22049 0.93482 1.00346 1.02061 1.20931 0.83901 0.94061 0.98741 1.44104 0.99979 1.73664 1.12193 1.19208 0.88880 1.34528 0.93910 0.90189 1.24355 0.95687 0.98746 1.00559 1.70032 1.07008 1.28424 1.46551 0.86893 0.79907 0.85955 0.78687 1.20369 1.21069 1.22144 1.20804 1.01597 0.90639 0.84695 1.21077 0.91362 1.00406 0.93471 1.21632 0.97332 0.93079 0.95982 1.21303 0.99445 0.99242 0.97922 1.17382 0.94186 0.88067 0.94082 1.91442 1.93404 1.55301 1.72456 1.20720 0.96046 0.98303 1.02881 1.20600 0.87027 0.96540 0.99634 1.98316 1.24214 1.83973 1.97574 0.93798 0.93430 0.93610 0.92284 0.92452 0.95159 0.93100 0.93401 0.94591 0.84239 0.82451 0.85420 0.85025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.15 9.91 37.15 0.37 -1.78 16 2 C -0.14 -2.56 5.60 -26.73 -0.15 -2.71 16 3 C 0.15 2.95 5.10 -4.04 -0.02 2.93 16 4 N -0.58 -13.30 2.63 -174.62 -0.46 -13.76 16 5 C -0.24 -6.00 9.15 -15.06 -0.14 -6.14 16 6 H 0.08 2.05 8.05 -52.49 -0.42 1.63 16 7 C 0.00 0.08 3.61 -17.43 -0.06 0.02 16 8 N -0.87 -22.01 8.68 55.49 0.48 -21.52 16 9 Si 0.86 20.23 29.67 -169.99 -5.04 15.19 16 10 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 11 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 12 H -0.29 -7.07 7.11 56.52 0.40 -6.67 16 13 C 0.15 3.26 4.88 -5.20 -0.03 3.24 16 14 C -0.06 -1.21 5.34 -104.58 -0.56 -1.77 16 15 C -0.06 -1.26 8.75 -39.60 -0.35 -1.61 16 16 C -0.16 -2.96 10.03 -39.51 -0.40 -3.35 16 17 C 0.08 1.47 7.30 -39.43 -0.29 1.18 16 18 F -0.15 -2.51 17.27 2.25 0.04 -2.47 16 19 C -0.16 -2.77 9.81 -39.48 -0.39 -3.15 16 20 C -0.01 -0.20 6.07 -39.50 -0.24 -0.44 16 21 Cl -0.07 -1.15 23.37 -51.86 -1.21 -2.37 16 22 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 23 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 24 H 0.04 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.06 1.15 6.69 -51.92 -0.35 0.80 16 26 H 0.06 1.13 7.95 -51.93 -0.41 0.72 16 27 H 0.03 0.60 8.14 -51.93 -0.42 0.18 16 28 H 0.05 0.94 5.97 -51.93 -0.31 0.63 16 29 H 0.25 6.17 8.05 -40.82 -0.33 5.84 16 30 H 0.04 0.74 6.78 -51.93 -0.35 0.39 16 31 H 0.14 3.41 4.90 -51.93 -0.25 3.15 16 32 H 0.16 3.46 5.14 -52.48 -0.27 3.19 16 33 H 0.13 2.11 8.06 -52.48 -0.42 1.68 16 34 H 0.13 1.98 8.06 -52.49 -0.42 1.56 16 LS Contribution 290.72 15.07 4.38 4.38 Total: -1.00 -24.89 290.72 -8.09 -32.97 By element: Atomic # 1 Polarization: 5.19 SS G_CDS: -4.03 Total: 1.16 kcal Atomic # 6 Polarization: -11.34 SS G_CDS: -2.24 Total: -13.58 kcal Atomic # 7 Polarization: -35.30 SS G_CDS: 0.02 Total: -35.28 kcal Atomic # 9 Polarization: -2.51 SS G_CDS: 0.04 Total: -2.47 kcal Atomic # 14 Polarization: 20.23 SS G_CDS: -5.04 Total: 15.19 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.21 Total: -2.37 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -24.89 -8.09 -32.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044373605.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.264 kcal (2) G-P(sol) polarization free energy of solvation -24.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds