Wall clock time and date at job start Mon Mar 30 2020 01:10:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52997 * 109.47378 * 2 1 4 4 H 1.09005 * 109.47448 * 54.77811 * 3 2 1 5 5 C 1.50700 * 109.47643 * 174.78312 * 3 2 1 6 6 H 1.07992 * 120.00003 * 119.99753 * 5 3 2 7 7 C 1.37880 * 119.99651 * 299.99662 * 5 3 2 8 8 N 1.31510 * 119.99571 * 179.97438 * 7 5 3 9 9 Si 1.86799 * 120.00048 * 0.02562 * 7 5 3 10 10 H 1.48503 * 109.47240 * 89.99668 * 9 7 5 11 11 H 1.48495 * 109.47094 * 210.00007 * 9 7 5 12 12 H 1.48503 * 109.47139 * 330.00033 * 9 7 5 13 13 N 1.46905 * 109.47016 * 294.78343 * 3 2 1 14 14 C 1.46900 * 111.00403 * 154.12238 * 13 3 2 15 15 C 1.50692 * 109.47253 * 185.61758 * 14 13 3 16 16 C 1.38265 * 119.97340 * 90.00066 * 15 14 13 17 17 C 1.38192 * 120.04902 * 179.97438 * 16 15 14 18 18 C 1.38444 * 119.98995 * 359.97438 * 17 16 15 19 19 F 1.35103 * 120.02835 * 179.97438 * 18 17 16 20 20 C 1.38540 * 119.93994 * 0.02562 * 18 17 16 21 21 Cl 1.73595 * 120.02836 * 179.97438 * 20 18 17 22 22 C 1.38226 * 119.96927 * 269.72472 * 15 14 13 23 23 H 1.08997 * 109.46695 * 60.09763 * 1 2 3 24 24 H 1.09002 * 109.46744 * 180.09262 * 1 2 3 25 25 H 1.08992 * 109.47429 * 300.09245 * 1 2 3 26 26 H 1.08996 * 109.47682 * 239.99757 * 2 1 3 27 27 H 1.09005 * 109.46771 * 119.99718 * 2 1 3 28 28 H 0.97004 * 119.99943 * 180.02562 * 8 7 5 29 29 H 1.00902 * 110.99787 * 278.08068 * 13 3 2 30 30 H 1.09000 * 109.46617 * 305.61539 * 14 13 3 31 31 H 1.09001 * 109.46760 * 65.61473 * 14 13 3 32 32 H 1.07994 * 119.97110 * 359.97438 * 16 15 14 33 33 H 1.08006 * 120.00494 * 180.02562 * 17 16 15 34 34 H 1.08001 * 119.98629 * 359.97438 * 22 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 1 1.6024 1.9827 0.8395 5 6 3.5415 1.4445 0.1292 6 1 4.1495 1.8880 -0.6453 7 6 4.1389 0.8800 1.2363 8 7 5.4492 0.8814 1.3487 9 14 3.0872 0.1122 2.5756 10 1 2.8674 -1.3243 2.2699 11 1 3.7797 0.2399 3.8829 12 1 1.7782 0.8107 2.6385 13 7 1.6559 2.0976 -1.2575 14 6 1.5563 3.5529 -1.0839 15 6 1.0288 4.1750 -2.3510 16 6 -0.3332 4.3352 -2.5269 17 6 -0.8186 4.9060 -3.6881 18 6 0.0593 5.3183 -4.6759 19 9 -0.4144 5.8760 -5.8117 20 6 1.4240 5.1576 -4.4992 21 17 2.5268 5.6733 -5.7367 22 6 1.9074 4.5903 -3.3340 23 1 -0.3632 0.5123 -0.8909 24 1 -0.3633 -1.0277 0.0017 25 1 -0.3634 0.5152 0.8891 26 1 1.8934 -0.5138 -0.8899 27 1 1.8933 -0.5138 0.8901 28 1 5.8696 0.4839 2.1274 29 1 2.3006 1.8651 -1.9980 30 1 0.8776 3.7749 -0.2603 31 1 2.5425 3.9607 -0.8621 32 1 -1.0182 4.0140 -1.7562 33 1 -1.8827 5.0311 -3.8245 34 1 2.9713 4.4691 -3.1934 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000053156147.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:10:03 Heat of formation + Delta-G solvation = -33.265192 kcal Electronic energy + Delta-G solvation = -18143.457268 eV Core-core repulsion = 15016.270815 eV Total energy + Delta-G solvation = -3127.186453 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.99237 -39.32591 -36.78095 -36.31040 -33.06761 -31.94391 -30.98934 -30.01810 -27.06962 -24.55074 -23.18557 -22.46910 -21.21575 -19.94695 -17.82926 -17.15294 -16.60043 -15.94669 -15.80277 -15.23076 -14.52025 -14.26164 -14.00517 -13.60465 -13.42336 -13.24248 -12.90364 -12.68845 -12.26840 -11.94419 -11.72602 -11.53801 -11.45596 -11.26469 -11.04226 -10.86531 -10.66123 -10.33736 -9.84366 -9.53827 -9.29568 -9.03088 -8.66496 -8.56995 -7.49926 -6.19081 -4.21027 0.94831 1.05246 1.96007 3.21491 3.31902 3.33846 3.41213 4.03618 4.31121 4.57899 4.75423 5.05746 5.13786 5.16834 5.29790 5.49848 5.79921 5.85042 5.92964 6.00617 6.00830 6.06272 6.21276 6.23433 6.53993 6.63677 6.67886 6.68586 6.89567 7.01741 7.19247 7.47255 7.88779 8.24998 8.38756 8.82274 9.43840 10.93688 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.027356 B = 0.004451 C = 0.003993 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1023.280236 B = 6289.731766 C = 7010.542844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.116 4.116 3 C 0.184 3.816 4 H 0.033 0.967 5 C -0.550 4.550 6 H 0.073 0.927 7 C 0.074 3.926 8 N -0.896 5.896 9 Si 0.890 3.110 10 H -0.277 1.277 11 H -0.298 1.298 12 H -0.264 1.264 13 N -0.675 5.675 14 C 0.099 3.901 15 C -0.061 4.061 16 C -0.069 4.069 17 C -0.145 4.145 18 C 0.096 3.904 19 F -0.133 7.133 20 C -0.072 4.072 21 Cl -0.058 7.058 22 C -0.077 4.077 23 H 0.062 0.938 24 H 0.033 0.967 25 H 0.039 0.961 26 H 0.058 0.942 27 H 0.045 0.955 28 H 0.265 0.735 29 H 0.337 0.663 30 H 0.076 0.924 31 H 0.049 0.951 32 H 0.140 0.860 33 H 0.141 0.859 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.299 7.573 -8.693 16.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.154 4.154 3 C 0.075 3.925 4 H 0.051 0.949 5 C -0.588 4.588 6 H 0.091 0.909 7 C -0.129 4.129 8 N -0.533 5.533 9 Si 0.720 3.280 10 H -0.204 1.204 11 H -0.226 1.226 12 H -0.189 1.189 13 N -0.304 5.304 14 C -0.031 4.031 15 C -0.062 4.062 16 C -0.087 4.087 17 C -0.163 4.163 18 C 0.075 3.925 19 F -0.112 7.112 20 C -0.100 4.100 21 Cl -0.029 7.029 22 C -0.097 4.097 23 H 0.081 0.919 24 H 0.052 0.948 25 H 0.058 0.942 26 H 0.077 0.923 27 H 0.063 0.937 28 H 0.074 0.926 29 H 0.154 0.846 30 H 0.095 0.905 31 H 0.067 0.933 32 H 0.157 0.843 33 H 0.159 0.841 34 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -11.734 7.482 -8.626 16.373 hybrid contribution 0.670 -0.149 0.484 0.840 sum -11.064 7.333 -8.142 15.572 Atomic orbital electron populations 1.21736 0.97554 0.99398 1.01404 1.21816 0.93849 0.99232 1.00489 1.19601 0.94438 0.90699 0.87755 0.94874 1.21717 0.90441 1.39512 1.07168 0.90907 1.25005 0.94769 0.95195 0.97948 1.69912 1.09002 1.44795 1.29624 0.86812 0.80577 0.79916 0.80673 1.20425 1.22588 1.18934 1.60820 1.55131 1.05041 1.09457 1.20810 0.99987 0.90165 0.92103 1.20151 0.92957 0.96531 0.96535 1.21053 0.95303 0.95853 0.96526 1.21102 0.99888 1.01747 0.93613 1.17387 0.90412 1.00140 0.84512 1.91510 1.88687 1.82835 1.48164 1.20950 0.89154 1.06248 0.93601 1.98376 1.62295 1.89406 1.52858 1.21009 1.01399 0.96541 0.90720 0.91883 0.94824 0.94227 0.92350 0.93664 0.92557 0.84615 0.90533 0.93297 0.84266 0.84125 0.83915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.48 9.80 37.16 0.36 -2.12 16 2 C -0.12 -2.40 5.11 -26.73 -0.14 -2.53 16 3 C 0.18 3.99 1.57 -68.86 -0.11 3.88 16 4 H 0.03 0.75 6.75 -51.93 -0.35 0.40 16 5 C -0.55 -14.38 9.06 -34.44 -0.31 -14.69 16 6 H 0.07 2.07 7.97 -52.49 -0.42 1.65 16 7 C 0.07 2.04 5.45 -17.82 -0.10 1.94 16 8 N -0.90 -26.49 13.96 55.43 0.77 -25.71 16 9 Si 0.89 21.21 24.41 -169.99 -4.15 17.06 16 10 H -0.28 -6.50 6.83 56.52 0.39 -6.11 16 11 H -0.30 -7.18 7.11 56.52 0.40 -6.78 16 12 H -0.26 -6.00 6.53 56.52 0.37 -5.63 16 13 N -0.68 -12.25 5.67 -109.22 -0.62 -12.86 16 14 C 0.10 1.56 5.64 -4.98 -0.03 1.53 16 15 C -0.06 -0.82 5.44 -104.62 -0.57 -1.39 16 16 C -0.07 -0.80 9.70 -39.59 -0.38 -1.18 16 17 C -0.14 -1.60 10.03 -39.52 -0.40 -1.99 16 18 C 0.10 1.21 7.28 -39.39 -0.29 0.93 16 19 F -0.13 -1.74 16.84 2.25 0.04 -1.70 16 20 C -0.07 -0.95 6.33 -39.44 -0.25 -1.20 16 21 Cl -0.06 -0.74 28.62 -51.86 -1.48 -2.23 16 22 C -0.08 -1.04 9.48 -39.55 -0.38 -1.41 16 23 H 0.06 1.03 7.76 -51.93 -0.40 0.63 16 24 H 0.03 0.52 8.14 -51.93 -0.42 0.10 16 25 H 0.04 0.67 8.14 -51.93 -0.42 0.25 16 26 H 0.06 1.20 8.14 -51.93 -0.42 0.78 16 27 H 0.05 1.01 3.21 -51.93 -0.17 0.84 16 28 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 29 H 0.34 6.29 8.45 -39.29 -0.33 5.95 16 30 H 0.08 1.16 7.86 -51.93 -0.41 0.75 16 31 H 0.05 0.85 8.06 -51.93 -0.42 0.43 16 32 H 0.14 1.40 8.06 -52.49 -0.42 0.98 16 33 H 0.14 1.21 8.06 -52.48 -0.42 0.78 16 34 H 0.14 1.88 8.06 -52.49 -0.42 1.45 16 LS Contribution 301.80 15.07 4.55 4.55 Total: -1.00 -27.92 301.80 -7.69 -35.61 By element: Atomic # 1 Polarization: 7.73 SS G_CDS: -4.22 Total: 3.51 kcal Atomic # 6 Polarization: -15.65 SS G_CDS: -2.58 Total: -18.23 kcal Atomic # 7 Polarization: -38.73 SS G_CDS: 0.15 Total: -38.58 kcal Atomic # 9 Polarization: -1.74 SS G_CDS: 0.04 Total: -1.70 kcal Atomic # 14 Polarization: 21.21 SS G_CDS: -4.15 Total: 17.06 kcal Atomic # 17 Polarization: -0.74 SS G_CDS: -1.48 Total: -2.23 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -27.92 -7.69 -35.61 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000053156147.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.345 kcal (2) G-P(sol) polarization free energy of solvation -27.921 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.577 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.689 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.610 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds