Wall clock time and date at job start Mon Mar 30 2020 01:02:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 N 1.30421 * 125.97634 * 2 1 4 4 N 1.39926 * 108.95897 * 180.02562 * 3 2 1 5 5 C 1.46493 * 125.74738 * 180.02562 * 4 3 2 6 6 C 1.34345 * 108.50277 * 0.02562 * 4 3 2 7 7 Cl 1.73597 * 126.31925 * 179.97438 * 6 4 3 8 8 C 1.38275 * 107.36408 * 359.97438 * 6 4 3 9 9 C 1.47303 * 126.43943 * 179.73947 * 8 6 4 10 10 O 1.21619 * 119.99995 * 90.02211 * 9 8 6 11 11 N 1.34773 * 119.99902 * 270.02745 * 9 8 6 12 12 C 1.46491 * 120.00176 * 359.97438 * 11 9 8 13 13 C 1.46501 * 119.99676 * 179.97438 * 11 9 8 14 14 C 1.50705 * 109.47288 * 89.99714 * 13 11 9 15 15 H 1.07993 * 119.99586 * 0.02562 * 14 13 11 16 16 C 1.37877 * 120.00169 * 179.97438 * 14 13 11 17 17 N 1.31517 * 119.99597 * 0.02562 * 16 14 13 18 18 Si 1.86795 * 120.00185 * 180.02562 * 16 14 13 19 19 H 1.48500 * 109.47007 * 60.00341 * 18 16 14 20 20 H 1.48501 * 109.47007 * 180.02562 * 18 16 14 21 21 H 1.48496 * 109.47216 * 300.00339 * 18 16 14 22 22 H 1.09004 * 109.47373 * 269.97440 * 1 2 3 23 23 H 1.09001 * 109.47191 * 29.97495 * 1 2 3 24 24 H 1.09001 * 109.47031 * 149.97259 * 1 2 3 25 25 H 1.09005 * 109.47541 * 269.98046 * 5 4 3 26 26 H 1.09006 * 109.47315 * 29.97961 * 5 4 3 27 27 H 1.09004 * 109.47132 * 149.97861 * 5 4 3 28 28 H 1.09002 * 109.47197 * 90.00187 * 12 11 9 29 29 H 1.09001 * 109.47718 * 210.00236 * 12 11 9 30 30 H 1.09006 * 109.47358 * 330.00395 * 12 11 9 31 31 H 1.09001 * 109.46884 * 209.99920 * 13 11 9 32 32 H 1.08998 * 109.47360 * 329.99772 * 13 11 9 33 33 H 0.97010 * 119.99704 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2731 1.0554 0.0000 4 7 3.6111 0.6459 -0.0006 5 6 4.7774 1.5324 -0.0002 6 6 3.6459 -0.6971 -0.0015 7 17 5.0708 -1.6886 -0.0032 8 6 2.3373 -1.1438 -0.0009 9 6 1.8921 -2.5479 -0.0070 10 8 1.7103 -3.1327 1.0438 11 7 1.6865 -3.1846 -1.1769 12 6 1.9052 -2.4801 -2.4426 13 6 1.2443 -4.5813 -1.1829 14 6 -0.2619 -4.6314 -1.1801 15 1 -0.8326 -3.7146 -1.1750 16 6 -0.9112 -5.8477 -1.1853 17 7 -0.2161 -6.9641 -1.1922 18 14 -2.7781 -5.9098 -1.1827 19 1 -3.2980 -5.2205 -2.3909 20 1 -3.2263 -7.3255 -1.1886 21 1 -3.2942 -5.2328 0.0340 22 1 -0.3634 -0.0005 1.0277 23 1 -0.3633 0.8902 -0.5134 24 1 -0.3633 -0.8898 -0.5143 25 1 5.0667 1.7527 -1.0278 26 1 4.5282 2.4606 0.5140 27 1 5.6052 1.0434 0.5134 28 1 2.9392 -2.6156 -2.7599 29 1 1.2361 -2.8828 -3.2030 30 1 1.7031 -1.4176 -2.3067 31 1 1.6228 -5.0784 -2.0760 32 1 1.6262 -5.0871 -0.2961 33 1 -0.6730 -7.8199 -1.1962 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000066345813.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:02:08 Heat of formation + Delta-G solvation = 39.094312 kcal Electronic energy + Delta-G solvation = -18869.707026 eV Core-core repulsion = 15765.578278 eV Total energy + Delta-G solvation = -3104.128748 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.083 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.39417 -38.45728 -36.98371 -34.68705 -34.09523 -32.53830 -30.42944 -29.48166 -27.74317 -26.17940 -25.39997 -23.26561 -21.46079 -20.26954 -18.73125 -17.10596 -16.45927 -16.19361 -15.69384 -15.23831 -14.93978 -14.26993 -13.95429 -13.52213 -13.40407 -12.89227 -12.72866 -12.58756 -12.24598 -12.14049 -12.04399 -11.75488 -11.74837 -11.68417 -11.17029 -10.88909 -10.66611 -10.53781 -10.12962 -9.60783 -9.24558 -9.08012 -8.47639 -8.37215 -7.59293 -6.00233 -4.04887 1.31612 1.47540 2.43710 2.48763 3.31650 3.35341 3.39629 3.43366 4.02114 4.36445 4.49364 4.80311 4.88030 5.09374 5.14282 5.30737 5.37357 5.51917 5.75796 5.78620 5.89063 5.97930 6.02463 6.28195 6.41499 6.56799 7.11118 7.46883 7.48682 7.58333 7.96076 8.27057 8.44866 8.93233 9.12813 9.59920 11.07850 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.027813 B = 0.005621 C = 0.005023 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1006.491966 B = 4980.518379 C = 5573.184240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.119 3.881 3 N -0.279 5.279 4 N -0.361 5.361 5 C 0.096 3.904 6 C 0.147 3.853 7 Cl 0.007 6.993 8 C -0.233 4.233 9 C 0.583 3.417 10 O -0.529 6.529 11 N -0.590 5.590 12 C 0.088 3.912 13 C 0.246 3.754 14 C -0.525 4.525 15 H 0.058 0.942 16 C 0.061 3.939 17 N -0.895 5.895 18 Si 0.898 3.102 19 H -0.277 1.277 20 H -0.287 1.287 21 H -0.276 1.276 22 H 0.085 0.915 23 H 0.078 0.922 24 H 0.088 0.912 25 H 0.081 0.919 26 H 0.096 0.904 27 H 0.089 0.911 28 H 0.041 0.959 29 H 0.075 0.925 30 H 0.054 0.946 31 H 0.034 0.966 32 H 0.045 0.955 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.593 16.102 -1.264 18.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.047 4.047 3 N -0.103 5.103 4 N -0.144 5.144 5 C -0.045 4.045 6 C -0.009 4.009 7 Cl 0.035 6.965 8 C -0.249 4.249 9 C 0.367 3.633 10 O -0.406 6.406 11 N -0.321 5.321 12 C -0.056 4.056 13 C 0.127 3.873 14 C -0.564 4.564 15 H 0.076 0.924 16 C -0.140 4.140 17 N -0.534 5.534 18 Si 0.725 3.275 19 H -0.203 1.203 20 H -0.212 1.212 21 H -0.201 1.201 22 H 0.103 0.897 23 H 0.097 0.903 24 H 0.107 0.893 25 H 0.099 0.901 26 H 0.114 0.886 27 H 0.107 0.893 28 H 0.060 0.940 29 H 0.093 0.907 30 H 0.073 0.927 31 H 0.052 0.948 32 H 0.063 0.937 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 9.777 16.818 -0.730 19.467 hybrid contribution -0.622 -0.952 -0.094 1.141 sum 9.155 15.866 -0.824 18.336 Atomic orbital electron populations 1.20329 0.85290 1.04112 1.03988 1.22328 0.97214 0.88374 0.96812 1.77205 0.84779 1.21629 1.26687 1.48260 1.06453 1.02572 1.57102 1.21976 0.84039 0.94478 1.03959 1.21875 0.89842 0.83910 1.05232 1.98421 1.35526 1.65739 1.96773 1.20185 0.90034 0.96417 1.18273 1.17033 0.78281 0.83579 0.84436 1.90772 1.51682 1.66790 1.31341 1.48075 1.64704 1.15133 1.04176 1.21569 1.00247 0.96476 0.87323 1.19330 0.94872 0.74582 0.98559 1.21386 0.91379 0.92535 1.51103 0.92392 1.24926 0.98587 0.95436 0.95100 1.69929 1.35604 0.97470 1.50412 0.86567 0.85345 0.76940 0.78625 1.20256 1.21246 1.20126 0.89670 0.90342 0.89296 0.90091 0.88559 0.89288 0.94023 0.90656 0.92705 0.94826 0.93711 0.92697 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.11 10.28 36.00 0.37 -0.74 16 2 C 0.12 1.94 6.94 -82.01 -0.57 1.37 16 3 N -0.28 -4.23 12.49 33.90 0.42 -3.80 16 4 N -0.36 -4.84 3.98 -64.32 -0.26 -5.10 16 5 C 0.10 0.77 11.28 59.84 0.67 1.45 16 6 C 0.15 2.28 7.53 -16.44 -0.12 2.16 16 7 Cl 0.01 0.10 28.56 -51.86 -1.48 -1.38 16 8 C -0.23 -4.25 4.12 -105.02 -0.43 -4.69 16 9 C 0.58 12.99 7.05 -12.58 -0.09 12.90 16 10 O -0.53 -14.09 16.69 5.26 0.09 -14.01 16 11 N -0.59 -12.98 2.86 -184.28 -0.53 -13.51 16 12 C 0.09 1.52 10.26 59.84 0.61 2.13 16 13 C 0.25 6.47 5.16 -5.19 -0.03 6.45 16 14 C -0.53 -14.79 9.39 -34.44 -0.32 -15.11 16 15 H 0.06 1.61 7.81 -52.49 -0.41 1.20 16 16 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 17 N -0.90 -26.56 13.29 55.43 0.74 -25.83 16 18 Si 0.90 21.71 29.54 -169.99 -5.02 16.69 16 19 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 20 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 21 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 22 H 0.08 1.14 8.14 -51.93 -0.42 0.72 16 23 H 0.08 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.09 1.39 8.00 -51.93 -0.42 0.97 16 25 H 0.08 0.51 8.14 -51.93 -0.42 0.09 16 26 H 0.10 0.64 8.14 -51.93 -0.42 0.21 16 27 H 0.09 0.58 7.78 -51.93 -0.40 0.18 16 28 H 0.04 0.64 8.14 -51.93 -0.42 0.22 16 29 H 0.07 1.28 8.07 -51.93 -0.42 0.86 16 30 H 0.05 0.86 6.63 -51.93 -0.34 0.52 16 31 H 0.03 0.89 8.07 -51.93 -0.42 0.47 16 32 H 0.04 1.33 7.42 -51.93 -0.39 0.94 16 33 H 0.26 7.40 8.31 -40.82 -0.34 7.06 16 LS Contribution 308.99 15.07 4.66 4.66 Total: -1.00 -34.16 308.99 -5.43 -39.59 By element: Atomic # 1 Polarization: -0.84 SS G_CDS: -4.05 Total: -4.89 kcal Atomic # 6 Polarization: 7.58 SS G_CDS: 0.00 Total: 7.57 kcal Atomic # 7 Polarization: -48.61 SS G_CDS: 0.38 Total: -48.24 kcal Atomic # 8 Polarization: -14.09 SS G_CDS: 0.09 Total: -14.01 kcal Atomic # 14 Polarization: 21.71 SS G_CDS: -5.02 Total: 16.69 kcal Atomic # 17 Polarization: 0.10 SS G_CDS: -1.48 Total: -1.38 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -34.16 -5.43 -39.59 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000066345813.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.686 kcal (2) G-P(sol) polarization free energy of solvation -34.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.592 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds